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The map label for this gene is 78779647

Identifier: 78779647

GI number: 78779647

Start: 1176075

End: 1177388

Strand: Reverse

Name: 78779647

Synonym: PMT9312_1264

Alternate gene names: NA

Gene position: 1177388-1176075 (Counterclockwise)

Preceding gene: 78779648

Following gene: 78779644

Centisome position: 68.89

GC content: 39.57

Gene sequence:

>1314_bases
ATGAAACTCTTCCAACAAATGTTGGTGGCAGGGGCATCTTTGAGCTTATTAGCTCCAATTGCTGCTCAAGCTTCCGATGT
AGTCAATTTAGAAGAAATGAATAGCTACGGACGTAGCCAAAAAAAATCTTCAAAACTTGACAGTAATACATTCATTAACG
AAGTTAGTGAAGATATTGCAACTCTAAACGGCCGTATTGATGGCCTTGAGTCTAAACAAAATGATTTTGAAGCAGGCGCT
TTCTCTTCTACAACATCCATGGATGGTAAGGCGATCTTTTGGATTGGTGCAATAGAAGGTATCAATGATGTTGATGACAA
TGAGGATGGTCTCAATACAGATGAACCATCTGATTCGGTTCAGACAGGTTATACCTACACAATGAACTTAAATACAAGTT
TTACAGGTGATGATAACCTCTATGTACGTTTAAAAGCTGGAGAAAATGGTGGGGCTTGGTCATCTAAACCAGCTGGTTAC
CATATCCATACCAAAGATACAAATGATGAATTTAGGGTTGATAAGATTTGGTATACATTCCCTATAGGAGATAACATTAC
TGCTTTCGCAGGTCCTAGGATTGAGAACTACTACATGTATGTAACTCCATCTATTTATAAACCAGGTGCTTTAAAAGCCT
TTAAGTTAGGTGGAAATAGTAACTTTGGAGCTAGTACCGACGTTGGTTTTGGTTTAAAATATGAAGCCGATAACGGTTTT
GCTATAGCATCGAACGTTGTTGATAAAAACGCTGATGCAGCCAATAGTGGTTTCTTCCAAGACGATTCAGTTAGCAAATG
GGATACTCAAATTGCATATACCCAGCCTAGGTATCACTTATCTTTAACTGTTTCAAATGCTCAGAACTGGACATCTCAGC
TTTATAATGCAACAGCATTAGGTGAGAATACCGCGACAGATTCGATGGGATATGCCGCAAGAGCATATTGGATGCCAGAA
GAAACAGGTACTGCAATGCCTGAAATTTCTGTTGGTTACGATACAAAGGTCTGGGATGATGCTGCTGCCGGAACTGTTGA
TGAGGCAGATAGCTGGATGGTTGGGTTGACTTGGAAAGATATTCGTCAGCCAGATGACAGAATTGGAATTGCATTTACTC
AACCATTAAAGGCTACTTCTATTGCTGGCGGAGGTGATACTAATGAAGTTGATCCACTATTGTGGGAAGTATATTATTCA
TGGAAACAAAATGATTCTGTGACAATAACTCCTGCAATCTTTGGCGGGTCTGATTCTTTCCAAGCAGATGATGATACTTT
TGGAGCAGTTGTAACAACAGCGTTCAAGTTCTAA

Upstream 100 bases:

>100_bases
ATGGTTACATCTCCTTGAAACTTTTATATCATTTCAAGATTGTTTCTTTAGATACAGTATGTATACCCCATTTTATTGGG
TTACTTTAGTGTGAGGTAAA

Downstream 100 bases:

>100_bases
AGTCAACTTTAAGCAATTGCTGAAATTGAACTAGAAAACACCCATTAAGGGTGTTTTTTTTTGATTATTATTTTTTGTTT
AACTTACCAACAATTTTCTC

Product: porin-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MKLFQQMLVAGASLSLLAPIAAQASDVVNLEEMNSYGRSQKKSSKLDSNTFINEVSEDIATLNGRIDGLESKQNDFEAGA
FSSTTSMDGKAIFWIGAIEGINDVDDNEDGLNTDEPSDSVQTGYTYTMNLNTSFTGDDNLYVRLKAGENGGAWSSKPAGY
HIHTKDTNDEFRVDKIWYTFPIGDNITAFAGPRIENYYMYVTPSIYKPGALKAFKLGGNSNFGASTDVGFGLKYEADNGF
AIASNVVDKNADAANSGFFQDDSVSKWDTQIAYTQPRYHLSLTVSNAQNWTSQLYNATALGENTATDSMGYAARAYWMPE
ETGTAMPEISVGYDTKVWDDAAAGTVDEADSWMVGLTWKDIRQPDDRIGIAFTQPLKATSIAGGGDTNEVDPLLWEVYYS
WKQNDSVTITPAIFGGSDSFQADDDTFGAVVTTAFKF

Sequences:

>Translated_437_residues
MKLFQQMLVAGASLSLLAPIAAQASDVVNLEEMNSYGRSQKKSSKLDSNTFINEVSEDIATLNGRIDGLESKQNDFEAGA
FSSTTSMDGKAIFWIGAIEGINDVDDNEDGLNTDEPSDSVQTGYTYTMNLNTSFTGDDNLYVRLKAGENGGAWSSKPAGY
HIHTKDTNDEFRVDKIWYTFPIGDNITAFAGPRIENYYMYVTPSIYKPGALKAFKLGGNSNFGASTDVGFGLKYEADNGF
AIASNVVDKNADAANSGFFQDDSVSKWDTQIAYTQPRYHLSLTVSNAQNWTSQLYNATALGENTATDSMGYAARAYWMPE
ETGTAMPEISVGYDTKVWDDAAAGTVDEADSWMVGLTWKDIRQPDDRIGIAFTQPLKATSIAGGGDTNEVDPLLWEVYYS
WKQNDSVTITPAIFGGSDSFQADDDTFGAVVTTAFKF
>Mature_437_residues
MKLFQQMLVAGASLSLLAPIAAQASDVVNLEEMNSYGRSQKKSSKLDSNTFINEVSEDIATLNGRIDGLESKQNDFEAGA
FSSTTSMDGKAIFWIGAIEGINDVDDNEDGLNTDEPSDSVQTGYTYTMNLNTSFTGDDNLYVRLKAGENGGAWSSKPAGY
HIHTKDTNDEFRVDKIWYTFPIGDNITAFAGPRIENYYMYVTPSIYKPGALKAFKLGGNSNFGASTDVGFGLKYEADNGF
AIASNVVDKNADAANSGFFQDDSVSKWDTQIAYTQPRYHLSLTVSNAQNWTSQLYNATALGENTATDSMGYAARAYWMPE
ETGTAMPEISVGYDTKVWDDAAAGTVDEADSWMVGLTWKDIRQPDDRIGIAFTQPLKATSIAGGGDTNEVDPLLWEVYYS
WKQNDSVTITPAIFGGSDSFQADDDTFGAVVTTAFKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049
- InterPro:   IPR001119 [H]

Pfam domain/function: PF04966 OprB; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 47595; Mature: 47595

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFQQMLVAGASLSLLAPIAAQASDVVNLEEMNSYGRSQKKSSKLDSNTFINEVSEDIA
CHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHH
TLNGRIDGLESKQNDFEAGAFSSTTSMDGKAIFWIGAIEGINDVDDNEDGLNTDEPSDSV
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
QTGYTYTMNLNTSFTGDDNLYVRLKAGENGGAWSSKPAGYHIHTKDTNDEFRVDKIWYTF
CCCEEEEEEECCEECCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEE
PIGDNITAFAGPRIENYYMYVTPSIYKPGALKAFKLGGNSNFGASTDVGFGLKYEADNGF
ECCCCEEEEECCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCE
AIASNVVDKNADAANSGFFQDDSVSKWDTQIAYTQPRYHLSLTVSNAQNWTSQLYNATAL
EEEECHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHEEC
GENTATDSMGYAARAYWMPEETGTAMPEISVGYDTKVWDDAAAGTVDEADSWMVGLTWKD
CCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEHHH
IRQPDDRIGIAFTQPLKATSIAGGGDTNEVDPLLWEVYYSWKQNDSVTITPAIFGGSDSF
HCCCCCCEEEEEECCCCEEEECCCCCCCCCCHHEEEEEHHCCCCCCEEEEEEEECCCCCC
QADDDTFGAVVTTAFKF
CCCCCCCCCEEEEEECC
>Mature Secondary Structure
MKLFQQMLVAGASLSLLAPIAAQASDVVNLEEMNSYGRSQKKSSKLDSNTFINEVSEDIA
CHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHH
TLNGRIDGLESKQNDFEAGAFSSTTSMDGKAIFWIGAIEGINDVDDNEDGLNTDEPSDSV
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
QTGYTYTMNLNTSFTGDDNLYVRLKAGENGGAWSSKPAGYHIHTKDTNDEFRVDKIWYTF
CCCEEEEEEECCEECCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEE
PIGDNITAFAGPRIENYYMYVTPSIYKPGALKAFKLGGNSNFGASTDVGFGLKYEADNGF
ECCCCEEEEECCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCE
AIASNVVDKNADAANSGFFQDDSVSKWDTQIAYTQPRYHLSLTVSNAQNWTSQLYNATAL
EEEECHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHEEC
GENTATDSMGYAARAYWMPEETGTAMPEISVGYDTKVWDDAAAGTVDEADSWMVGLTWKD
CCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEHHH
IRQPDDRIGIAFTQPLKATSIAGGGDTNEVDPLLWEVYYSWKQNDSVTITPAIFGGSDSF
HCCCCCCEEEEEECCCCEEEECCCCCCCCCCHHEEEEEHHCCCCCCEEEEEEEECCCCCC
QADDDTFGAVVTTAFKF
CCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]