Click here to switch to the map view.

The map label for this gene is 78779578

Identifier: 78779578

GI number: 78779578

Start: 1115765

End: 1117249

Strand: Reverse

Name: 78779578

Synonym: PMT9312_1195

Alternate gene names: NA

Gene position: 1117249-1115765 (Counterclockwise)

Preceding gene: 78779579

Following gene: 78779572

Centisome position: 65.37

GC content: 30.91

Gene sequence:

>1485_bases
ATGCGAATTCTAATGAAATTCAAGAATTACTTTAGGAAAGAAAATGGATTCACATTAGTTGAACTAATTCTAGCTTCTTC
AATTTCACTATCGACAATTATGATGGGGTATTTTGTTCTTAGAAATATCATTGAAGGAAATAAAATAGATGAAATTCAGT
TTGGATTAAATTCCCAAGTAAATGATGCTTTAGATTTTATTATTGATGAAGTAGAGAGTGGTGAAAGAATAATTGATAAG
GAATCAGATATAAGGTCTTTAAATAATAATTGTTCATTTCCTTCAGATAGTGAATTTATCTTTGGAATAAAGTTACCGAA
CCAAGCTTTAGCAAAAAGTGATTATATAAAAGGAGGAGATCAGTTCAACTTAAGTCAAATTGATTGTCCAATAGTATATT
CTTTAAAACAAAGTACAAACCAAGAAAACGGCCCATATGAATTAATTAGATATGGGCCTCAATTTAATGAAAAAGGTTTT
TATTTATCACCTTCATTTAATGATTTTCAGAATTCTACTATTCTTGAAAATATATCTTCAAAAGAAAATTATCAGAAAAT
TAAGTGCAATAATTCTTGGAAGTCCCTCAAAACTATGCGTGGTCTTTCTTACTGTATCGATAATTTTAATAAGGCAATAG
AAATTCAAATCAAAGTAGAGGATAATAAAAATAAAATTGCAAATAACCCTAATACTTCATTACTTTCTTCAGGTGGATTT
AGCAGAGTTCAGGACTCATCTCAAATTAGTTTGATTCCACCTCCATCCTTAAGTAGTGGAAATGCGCCAAATTGTATTGG
AGGTGAATGCTGTTGGCTAGGAGTTTGTTTGAAGTCAAGAAAAATTACTTTCATGCTGGACATCTCAGAAAATATGGATG
ATAATTTTGAACATAGAAATGGCGAAATTATTAAAGGAAGATGGACTCAATCAAGTCCTGAATTTCTTAGGCCTAGAATT
AATGGAAAAGGTTTAATAACTTATGCTATTTCTTCACTTAAAGATCATCTAAATAGGCTTCCGACATCTGAGAGTGACCA
GGTTTATTTTCAAATAATTGCATTTAATAATACAACTCAGAAATACCCTGATTCTTCGCCAATAAAATTATCAAATTCAA
CAAGATTGGCTGCATTCGAATTCCTTGATAATTTAACAACCGAGGGCTTTTCCAAACCTTGGGATGGTTTGTGTTCTGCA
TTAGTAAATGAATCTACAGAACAAGTTATTTTAGTATCTAGTAGTGTGCCCTCAAATTCAGAAGGAACTTGCGCAGGAAG
ATCAGCATCTTCTTCAAACGATTATGCTGAAATTATCGAGGAATATAACCGTGATAGCAGAAGCTTAAATAATCAAGGTT
CCTTGATAATAGATACAGTTTCCTATTTTCATAATTTTTGCGATTCCAATAAAAATTATCTGAATGATAACTGGATGGGA
AGAATTTCAATGGGAGATGAATCGCAATGTACTTATATTAAATAG

Upstream 100 bases:

>100_bases
CAGGTCAAATAAAAAAAGGGAAATTCAATACAAATTCTTGGTTATTGGATAATATGCCTGTAAGCCAATTATCGAGTAAC
GGGATTCTTACTCCCGAAAG

Downstream 100 bases:

>100_bases
ATATATTATTGAAAAAAAAATTTTAATCTTTAAGGGAATTAATTAAATCAATAGATTCTTTATTGTTAAGCTTAAAATCA
TAGTTTTTGAGATTATCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MRILMKFKNYFRKENGFTLVELILASSISLSTIMMGYFVLRNIIEGNKIDEIQFGLNSQVNDALDFIIDEVESGERIIDK
ESDIRSLNNNCSFPSDSEFIFGIKLPNQALAKSDYIKGGDQFNLSQIDCPIVYSLKQSTNQENGPYELIRYGPQFNEKGF
YLSPSFNDFQNSTILENISSKENYQKIKCNNSWKSLKTMRGLSYCIDNFNKAIEIQIKVEDNKNKIANNPNTSLLSSGGF
SRVQDSSQISLIPPPSLSSGNAPNCIGGECCWLGVCLKSRKITFMLDISENMDDNFEHRNGEIIKGRWTQSSPEFLRPRI
NGKGLITYAISSLKDHLNRLPTSESDQVYFQIIAFNNTTQKYPDSSPIKLSNSTRLAAFEFLDNLTTEGFSKPWDGLCSA
LVNESTEQVILVSSSVPSNSEGTCAGRSASSSNDYAEIIEEYNRDSRSLNNQGSLIIDTVSYFHNFCDSNKNYLNDNWMG
RISMGDESQCTYIK

Sequences:

>Translated_494_residues
MRILMKFKNYFRKENGFTLVELILASSISLSTIMMGYFVLRNIIEGNKIDEIQFGLNSQVNDALDFIIDEVESGERIIDK
ESDIRSLNNNCSFPSDSEFIFGIKLPNQALAKSDYIKGGDQFNLSQIDCPIVYSLKQSTNQENGPYELIRYGPQFNEKGF
YLSPSFNDFQNSTILENISSKENYQKIKCNNSWKSLKTMRGLSYCIDNFNKAIEIQIKVEDNKNKIANNPNTSLLSSGGF
SRVQDSSQISLIPPPSLSSGNAPNCIGGECCWLGVCLKSRKITFMLDISENMDDNFEHRNGEIIKGRWTQSSPEFLRPRI
NGKGLITYAISSLKDHLNRLPTSESDQVYFQIIAFNNTTQKYPDSSPIKLSNSTRLAAFEFLDNLTTEGFSKPWDGLCSA
LVNESTEQVILVSSSVPSNSEGTCAGRSASSSNDYAEIIEEYNRDSRSLNNQGSLIIDTVSYFHNFCDSNKNYLNDNWMG
RISMGDESQCTYIK
>Mature_494_residues
MRILMKFKNYFRKENGFTLVELILASSISLSTIMMGYFVLRNIIEGNKIDEIQFGLNSQVNDALDFIIDEVESGERIIDK
ESDIRSLNNNCSFPSDSEFIFGIKLPNQALAKSDYIKGGDQFNLSQIDCPIVYSLKQSTNQENGPYELIRYGPQFNEKGF
YLSPSFNDFQNSTILENISSKENYQKIKCNNSWKSLKTMRGLSYCIDNFNKAIEIQIKVEDNKNKIANNPNTSLLSSGGF
SRVQDSSQISLIPPPSLSSGNAPNCIGGECCWLGVCLKSRKITFMLDISENMDDNFEHRNGEIIKGRWTQSSPEFLRPRI
NGKGLITYAISSLKDHLNRLPTSESDQVYFQIIAFNNTTQKYPDSSPIKLSNSTRLAAFEFLDNLTTEGFSKPWDGLCSA
LVNESTEQVILVSSSVPSNSEGTCAGRSASSSNDYAEIIEEYNRDSRSLNNQGSLIIDTVSYFHNFCDSNKNYLNDNWMG
RISMGDESQCTYIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55639; Mature: 55639

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILMKFKNYFRKENGFTLVELILASSISLSTIMMGYFVLRNIIEGNKIDEIQFGLNSQV
CCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCH
NDALDFIIDEVESGERIIDKESDIRSLNNNCSFPSDSEFIFGIKLPNQALAKSDYIKGGD
HHHHHHHHHHHCCCCHHHCCCHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCC
QFNLSQIDCPIVYSLKQSTNQENGPYELIRYGPQFNEKGFYLSPSFNDFQNSTILENISS
CCCCCCCCCCEEEEEHHHCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCHHHHHHCC
KENYQKIKCNNSWKSLKTMRGLSYCIDNFNKAIEIQIKVEDNKNKIANNPNTSLLSSGGF
CCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC
SRVQDSSQISLIPPPSLSSGNAPNCIGGECCWLGVCLKSRKITFMLDISENMDDNFEHRN
CCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC
GEIIKGRWTQSSPEFLRPRINGKGLITYAISSLKDHLNRLPTSESDQVYFQIIAFNNTTQ
CCEEEEECCCCCHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCC
KYPDSSPIKLSNSTRLAAFEFLDNLTTEGFSKPWDGLCSALVNESTEQVILVSSSVPSNS
CCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCC
EGTCAGRSASSSNDYAEIIEEYNRDSRSLNNQGSLIIDTVSYFHNFCDSNKNYLNDNWMG
CCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCEE
RISMGDESQCTYIK
EEECCCCCCCCCCC
>Mature Secondary Structure
MRILMKFKNYFRKENGFTLVELILASSISLSTIMMGYFVLRNIIEGNKIDEIQFGLNSQV
CCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCH
NDALDFIIDEVESGERIIDKESDIRSLNNNCSFPSDSEFIFGIKLPNQALAKSDYIKGGD
HHHHHHHHHHHCCCCHHHCCCHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCC
QFNLSQIDCPIVYSLKQSTNQENGPYELIRYGPQFNEKGFYLSPSFNDFQNSTILENISS
CCCCCCCCCCEEEEEHHHCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCHHHHHHCC
KENYQKIKCNNSWKSLKTMRGLSYCIDNFNKAIEIQIKVEDNKNKIANNPNTSLLSSGGF
CCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC
SRVQDSSQISLIPPPSLSSGNAPNCIGGECCWLGVCLKSRKITFMLDISENMDDNFEHRN
CCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC
GEIIKGRWTQSSPEFLRPRINGKGLITYAISSLKDHLNRLPTSESDQVYFQIIAFNNTTQ
CCEEEEECCCCCHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCC
KYPDSSPIKLSNSTRLAAFEFLDNLTTEGFSKPWDGLCSALVNESTEQVILVSSSVPSNS
CCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCC
EGTCAGRSASSSNDYAEIIEEYNRDSRSLNNQGSLIIDTVSYFHNFCDSNKNYLNDNWMG
CCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCEE
RISMGDESQCTYIK
EEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA