| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is apr [H]
Identifier: 78779568
GI number: 78779568
Start: 1102422
End: 1105097
Strand: Reverse
Name: apr [H]
Synonym: PMT9312_1185
Alternate gene names: 78779568
Gene position: 1105097-1102422 (Counterclockwise)
Preceding gene: 78779570
Following gene: 78779567
Centisome position: 64.66
GC content: 30.04
Gene sequence:
>2676_bases ATGAGCAATAAAAAAGAAGGCTCATCAGGTAGTTTTGATAAATTAAACACTGATAACAATAACAATAAAAAAAATCTTTC GAAACAAAATAGTGAAGTTGAAAATGGATTAAATAAGCTAGAAAATAATAAAAGTAATACAGAAATAAATTTAATTAAAC AAATATCAACTGAAGGAGAATCATATGAGATTGAATATTCAATTGATCAAATACAGAATCCTATAGATAAAAGTTCAGAT TTAAAACAATTTAATCTAGAAAGAATTCGAAAATTGCAAACATTTGATTTGGAATATAAAAATAAATACTACGAAGATTA TTTTAATTCGTATTCAATAGATAGTTATGAAAATCAAGAAATTTCTTTAATTCAATTTAATCAAAATACAATTATAGATT TTAAAAATTCAGAAAATATACTTGAACGAACAAAATCATCTTCAGGTTCAGGATGTGGTAATCAGGAAATTCCTACTCCT ATAAATTTTTCAAGTACAGATGGCTATGGACATGCAAATATTGAAAGGGCATTTGAGATTCTTAAAGGGATTGATATCTC TTCAAAGGATGATTTGGGAGGTAATTTATGGGGTTTAGATAATATTGGAGCCCCTGAGGTTTGGACAAGTACAGGATGTT TTAGTGGCAGTACGGGAAAAGATGTTGTTGTAGCTGTATTAGATACTGGTCTTGATTATAGTCATTCTGAATTTTCTGGG AGAATTGTAGATGGATATGATTTTATTGATAATGATAATATTGCACAAGATGTGCATGGACATGGTACTCATTGTTCAGG AACTATATTAGGAGCTAATGATGGAGTGGGAATTACAGGAGTTGCTTATGATGCAAAAATTATGCCAATTAAAGTTTTAA ATGATAGTGGCCGTGGATCGATAGCAGGAATAGTTGCTGGTATGAGATGGGCGGTAGATAATGGAGCTGATGTACTTAAT CTTTCTTTAGGGGGTGGCGCGCCTAATAGCGATTATTTGGATGCTTTAAAATATGCTGCAGATAATGGGGTTGTGGTTGC GATGGCTTCAGGAAATTCTTCCTCTAGTGCTCCTTTATGGCCTGCTAGATATGCTACGGATTATGGAATAGCAGTTGGTG CTGTTGATATAAACAAAAATGATGCTTATTTTTCTAATCGCGCTGGCAACACCACGATGGATTATGTATCTGCACCTGGT GTAAATGTTTATTCTTCTCTTCCTGGAGGAGGATATGAAAGTTGGAATGGAACTTCAATGGCTGCTCCGCATGTTGCTGG AATGGCTGCATTATTGAAAAGTTATGATAAAACTTTAACTCCATTACAAATAGAAACTTTAATTTCTGCATCAGCGTCTA ATTCGGATTCAAACTCATCTAATAATTCAAATAATTATTTTGAATCCAATTCAGAATTTAATATGTTCTATTCCAAAGAC TTTGATGATTTGTTCTTTGAATCTAACGAATTAATCTCAGGTTATGAATATAGTTTTGATTCAAACTCATCTGGTTCAGA TTATTTGGATTGGGCCCTAGATTTAATTGGTGAGAATAATGAAAAAATGTACATAGCAGGAACAGATGGATTTTATGAAA ACCAAAGTAAAAATAAAATTGAAGAATTAAATTCTTTTATTGATGAAATTAATCAAGGAGTAGAAGATAAAGAAGAAGAG ATAGCATATGCGGGCGGAACAGATGGATTTTATGAAAACCAAAGTAAAAATAAAATTGAAGAATTAAATTCTTTTATTGA TGAAATTAATCAAGGAGTAGAAGATAAAGAAGAAGAGATAGCATATGCGGGCGGAACAGATGGATTTTATGAAAACCAAA GTAAAAATAAAATTGAAGAATTAAATTCTTTTATTGATGAAATTAATCAAGGAGTAGAAGATAAAGAAGAAGAGATAGCA TATGCGGGCGGAACAGATGGATTTTATGAAAACCAAAGTAAAAATAAAATTGAAGAATTAAATTCTTTTATTGATGAAAT TAATCAAGGAGTAGAAGATAAAGAAGAAGAGATAGCATATGCGGGCGGAACAGATGGATTTTATGAAAACCAAAGTAAAA ATAAAATTGAAGAATTAAATTCTTTTATTGATGAAATTAATCAAGGAGTAGAAGATAAAGAAGAAGAGATAGCATATGCG GGCGGAACAGATGGATTTTATGAAAACCAAAGTAAAAATAAAATTGAAGAATTAAATTCTTTTATTGATGAAATTAATCA AGGAGTAGAAGATAAAGAAGAAGAGATAGCATATGCGGGCGGAACAGATGGATTTTATGAAAACCAAAGTAAAAATAAAA TTGAAGAATTAAATTCTTTTATTGATGAAATTAATCAAGGAGTAGAAGATAAAGAAGAAGAGATAGCATATGCGGGCGGA ACAGATGGATTTTATGAAAACCAAAGTAAAAATAAAATTGAAGAATTAAATTCTTTTATTGATGAAATTAATCAAGGAGT AGAAGATAAAGAAGAAGAGATAGCATATGCGGGCGGAACAGATGGATTTTATGAAAACCAAAGTAAAAATGGAACTATTT TGGGTTTTAACTCTAATTTAGAAAATGAAAATAATCTTTTTGAAGATAATTTAATTTTGAGTAATAATGGTTTCCAAAAT TATTTAGAAAATCAAAATAATAATTATTCTGTTTAA
Upstream 100 bases:
>100_bases ATTTTTGGGATAAAAGATTTTTCTTTTAAATTATAATTTTAAAAATAAAATTGCCAATTCTATAAAAAACTAATATATTT AATGAATAAATGAGTAGTTT
Downstream 100 bases:
>100_bases CAAGTTAATTGATAGAAAGCTTTCTCCTGTCATGTTTTTTAAATGCCAAACAGCCTGTATTTATTTCTATGGATTATCAG AATTTTATTGTTAAAGGTTT
Product: subtilisin-like serine protease-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 891; Mature: 890
Protein sequence:
>891_residues MSNKKEGSSGSFDKLNTDNNNNKKNLSKQNSEVENGLNKLENNKSNTEINLIKQISTEGESYEIEYSIDQIQNPIDKSSD LKQFNLERIRKLQTFDLEYKNKYYEDYFNSYSIDSYENQEISLIQFNQNTIIDFKNSENILERTKSSSGSGCGNQEIPTP INFSSTDGYGHANIERAFEILKGIDISSKDDLGGNLWGLDNIGAPEVWTSTGCFSGSTGKDVVVAVLDTGLDYSHSEFSG RIVDGYDFIDNDNIAQDVHGHGTHCSGTILGANDGVGITGVAYDAKIMPIKVLNDSGRGSIAGIVAGMRWAVDNGADVLN LSLGGGAPNSDYLDALKYAADNGVVVAMASGNSSSSAPLWPARYATDYGIAVGAVDINKNDAYFSNRAGNTTMDYVSAPG VNVYSSLPGGGYESWNGTSMAAPHVAGMAALLKSYDKTLTPLQIETLISASASNSDSNSSNNSNNYFESNSEFNMFYSKD FDDLFFESNELISGYEYSFDSNSSGSDYLDWALDLIGENNEKMYIAGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEE IAYAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIA YAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYA GGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAGG TDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAGGTDGFYENQSKNGTILGFNSNLENENNLFEDNLILSNNGFQN YLENQNNNYSV
Sequences:
>Translated_891_residues MSNKKEGSSGSFDKLNTDNNNNKKNLSKQNSEVENGLNKLENNKSNTEINLIKQISTEGESYEIEYSIDQIQNPIDKSSD LKQFNLERIRKLQTFDLEYKNKYYEDYFNSYSIDSYENQEISLIQFNQNTIIDFKNSENILERTKSSSGSGCGNQEIPTP INFSSTDGYGHANIERAFEILKGIDISSKDDLGGNLWGLDNIGAPEVWTSTGCFSGSTGKDVVVAVLDTGLDYSHSEFSG RIVDGYDFIDNDNIAQDVHGHGTHCSGTILGANDGVGITGVAYDAKIMPIKVLNDSGRGSIAGIVAGMRWAVDNGADVLN LSLGGGAPNSDYLDALKYAADNGVVVAMASGNSSSSAPLWPARYATDYGIAVGAVDINKNDAYFSNRAGNTTMDYVSAPG VNVYSSLPGGGYESWNGTSMAAPHVAGMAALLKSYDKTLTPLQIETLISASASNSDSNSSNNSNNYFESNSEFNMFYSKD FDDLFFESNELISGYEYSFDSNSSGSDYLDWALDLIGENNEKMYIAGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEE IAYAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIA YAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYA GGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAGG TDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAGGTDGFYENQSKNGTILGFNSNLENENNLFEDNLILSNNGFQN YLENQNNNYSV >Mature_890_residues SNKKEGSSGSFDKLNTDNNNNKKNLSKQNSEVENGLNKLENNKSNTEINLIKQISTEGESYEIEYSIDQIQNPIDKSSDL KQFNLERIRKLQTFDLEYKNKYYEDYFNSYSIDSYENQEISLIQFNQNTIIDFKNSENILERTKSSSGSGCGNQEIPTPI NFSSTDGYGHANIERAFEILKGIDISSKDDLGGNLWGLDNIGAPEVWTSTGCFSGSTGKDVVVAVLDTGLDYSHSEFSGR IVDGYDFIDNDNIAQDVHGHGTHCSGTILGANDGVGITGVAYDAKIMPIKVLNDSGRGSIAGIVAGMRWAVDNGADVLNL SLGGGAPNSDYLDALKYAADNGVVVAMASGNSSSSAPLWPARYATDYGIAVGAVDINKNDAYFSNRAGNTTMDYVSAPGV NVYSSLPGGGYESWNGTSMAAPHVAGMAALLKSYDKTLTPLQIETLISASASNSDSNSSNNSNNYFESNSEFNMFYSKDF DDLFFESNELISGYEYSFDSNSSGSDYLDWALDLIGENNEKMYIAGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEI AYAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAY AGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAG GTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAGGT DGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAGGTDGFYENQSKNGTILGFNSNLENENNLFEDNLILSNNGFQNY LENQNNNYSV
Specific function: Subtilisin is an extracellular alkaline serine protease, it catalyzes the hydrolysis of proteins and peptide amides [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI4506775, Length=237, Percent_Identity=31.6455696202532, Blast_Score=69, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324576, Length=239, Percent_Identity=35.9832635983264, Blast_Score=108, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6320775, Length=282, Percent_Identity=32.9787234042553, Blast_Score=107, Evalue=8e-24, Organism=Saccharomyces cerevisiae, GI6319893, Length=230, Percent_Identity=31.304347826087, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI45550681, Length=240, Percent_Identity=30.4166666666667, Blast_Score=66, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: =3.4.21.62 [H]
Molecular weight: Translated: 98385; Mature: 98254
Theoretical pI: Translated: 3.84; Mature: 3.84
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKKEGSSGSFDKLNTDNNNNKKNLSKQNSEVENGLNKLENNKSNTEINLIKQISTEGE CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHCCCCC SYEIEYSIDQIQNPIDKSSDLKQFNLERIRKLQTFDLEYKNKYYEDYFNSYSIDSYENQE CEEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCE ISLIQFNQNTIIDFKNSENILERTKSSSGSGCGNQEIPTPINFSSTDGYGHANIERAFEI EEEEEECCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH LKGIDISSKDDLGGNLWGLDNIGAPEVWTSTGCFSGSTGKDVVVAVLDTGLDYSHSEFSG HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC RIVDGYDFIDNDNIAQDVHGHGTHCSGTILGANDGVGITGVAYDAKIMPIKVLNDSGRGS EEEECCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCEEEEEECCEEEEEEEECCCCCCC IAGIVAGMRWAVDNGADVLNLSLGGGAPNSDYLDALKYAADNGVVVAMASGNSSSSAPLW HHHHHHHHHEEECCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC PARYATDYGIAVGAVDINKNDAYFSNRAGNTTMDYVSAPGVNVYSSLPGGGYESWNGTSM CHHHCCCCCEEEEEEEECCCCCEECCCCCCCCHHHHCCCCCCCEECCCCCCCCCCCCCCC AAPHVAGMAALLKSYDKTLTPLQIETLISASASNSDSNSSNNSNNYFESNSEFNMFYSKD CCHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCC FDDLFFESNELISGYEYSFDSNSSGSDYLDWALDLIGENNEKMYIAGTDGFYENQSKNKI CHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHH EELNSFIDEINQGVEDKEEEIAYAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEI HHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHE AYAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAGGTDGFYENQSKNKIEEL EECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCCCCHHHHHHH NSFIDEINQGVEDKEEEIAYAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYA HHHHHHHHCCCCCCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHEEEC GGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAGGTDGFYENQSKNKIEELNSF CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCCCCHHHHHHHHHH IDEINQGVEDKEEEIAYAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAGGT HHHHHCCCCCCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHEEECCCC DGFYENQSKNGTILGFNSNLENENNLFEDNLILSNNGFQNYLENQNNNYSV CCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCC >Mature Secondary Structure SNKKEGSSGSFDKLNTDNNNNKKNLSKQNSEVENGLNKLENNKSNTEINLIKQISTEGE CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHCCCCC SYEIEYSIDQIQNPIDKSSDLKQFNLERIRKLQTFDLEYKNKYYEDYFNSYSIDSYENQE CEEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCE ISLIQFNQNTIIDFKNSENILERTKSSSGSGCGNQEIPTPINFSSTDGYGHANIERAFEI EEEEEECCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH LKGIDISSKDDLGGNLWGLDNIGAPEVWTSTGCFSGSTGKDVVVAVLDTGLDYSHSEFSG HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC RIVDGYDFIDNDNIAQDVHGHGTHCSGTILGANDGVGITGVAYDAKIMPIKVLNDSGRGS EEEECCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCEEEEEECCEEEEEEEECCCCCCC IAGIVAGMRWAVDNGADVLNLSLGGGAPNSDYLDALKYAADNGVVVAMASGNSSSSAPLW HHHHHHHHHEEECCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC PARYATDYGIAVGAVDINKNDAYFSNRAGNTTMDYVSAPGVNVYSSLPGGGYESWNGTSM CHHHCCCCCEEEEEEEECCCCCEECCCCCCCCHHHHCCCCCCCEECCCCCCCCCCCCCCC AAPHVAGMAALLKSYDKTLTPLQIETLISASASNSDSNSSNNSNNYFESNSEFNMFYSKD CCHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCC FDDLFFESNELISGYEYSFDSNSSGSDYLDWALDLIGENNEKMYIAGTDGFYENQSKNKI CHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHH EELNSFIDEINQGVEDKEEEIAYAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEI HHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHE AYAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAGGTDGFYENQSKNKIEEL EECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCCCCHHHHHHH NSFIDEINQGVEDKEEEIAYAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYA HHHHHHHHCCCCCCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHEEEC GGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAGGTDGFYENQSKNKIEELNSF CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCCCCHHHHHHHHHH IDEINQGVEDKEEEIAYAGGTDGFYENQSKNKIEELNSFIDEINQGVEDKEEEIAYAGGT HHHHHCCCCCCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHEEECCCC DGFYENQSKNGTILGFNSNLENENNLFEDNLILSNNGFQNYLENQNNNYSV CCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6420308; 9826175 [H]