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The map label for this gene is 78779556

Identifier: 78779556

GI number: 78779556

Start: 1088986

End: 1089240

Strand: Reverse

Name: 78779556

Synonym: PMT9312_1173

Alternate gene names: NA

Gene position: 1089240-1088986 (Counterclockwise)

Preceding gene: 78779557

Following gene: 78779555

Centisome position: 63.73

GC content: 33.33

Gene sequence:

>255_bases
ATGGTTGACTTTAAAGATAATTTTTCAAGCGAAAGCTTTTACCCAGATAGTAATTATTATCTTGATCAGGACAATACTCC
TAAAGAGACTCTTGTTTCAGAAGACCAAATATTTAATACGGGAGGAATTTTTGAATGGCCAAATAGCTATTGGTATATTG
CGGAAAGAACAAATGGAAGGCTTGCAATGATAGGCTTTATGGCTGTCATTATTAATTACACCTTATTTGGTTGGATAGCA
TATCCAATCCTTTAA

Upstream 100 bases:

>100_bases
TCCTCATATTGTTATTAAATTAATAGTGAGGTTTTAGGAACTAAAAACAACATAATTAAAAAAAACTTTTTAAGATAATT
GAAATCAAATTTCTAATAAA

Downstream 100 bases:

>100_bases
ATGAATGTAGAATTTTTTAAAGAGCTTTGGCATAATCAACCAAATACACTTCTTGGTGCAGGCGCAATAGGACTAATATT
GTTGATAATTTATAACAGAT

Product: high light inducible protein-like

Products: NA

Alternate protein names: High Light Inducible Protein-Like

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MVDFKDNFSSESFYPDSNYYLDQDNTPKETLVSEDQIFNTGGIFEWPNSYWYIAERTNGRLAMIGFMAVIINYTLFGWIA
YPIL

Sequences:

>Translated_84_residues
MVDFKDNFSSESFYPDSNYYLDQDNTPKETLVSEDQIFNTGGIFEWPNSYWYIAERTNGRLAMIGFMAVIINYTLFGWIA
YPIL
>Mature_84_residues
MVDFKDNFSSESFYPDSNYYLDQDNTPKETLVSEDQIFNTGGIFEWPNSYWYIAERTNGRLAMIGFMAVIINYTLFGWIA
YPIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9857; Mature: 9857

Theoretical pI: Translated: 3.81; Mature: 3.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDFKDNFSSESFYPDSNYYLDQDNTPKETLVSEDQIFNTGGIFEWPNSYWYIAERTNGR
CCCCCCCCCCCCCCCCCCEEECCCCCCHHHHCCCCCEECCCCEEECCCCEEEEEECCCCC
LAMIGFMAVIINYTLFGWIAYPIL
CHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVDFKDNFSSESFYPDSNYYLDQDNTPKETLVSEDQIFNTGGIFEWPNSYWYIAERTNGR
CCCCCCCCCCCCCCCCCCEEECCCCCCHHHHCCCCCEECCCCEEECCCCEEEEEECCCCC
LAMIGFMAVIINYTLFGWIAYPIL
CHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA