Click here to switch to the map view.

The map label for this gene is 78779557

Identifier: 78779557

GI number: 78779557

Start: 1090004

End: 1090228

Strand: Reverse

Name: 78779557

Synonym: PMT9312_1174

Alternate gene names: NA

Gene position: 1090228-1090004 (Counterclockwise)

Preceding gene: 78779558

Following gene: 78779556

Centisome position: 63.79

GC content: 38.67

Gene sequence:

>225_bases
ATGATCGGGACGACAGGATTCGAACCTGCGACCTATTGCTCCCAAAAAACTCGATCTAAACTTGAGGGGATAAGACCCAT
CTTTTTCATGACTAAATGGAATGAAAAATCTTGGCAAAAAGATTCCTTAAGCATGAAGTCATATTCTCCTTCAGATGCAA
AACTTTTAATGGGAGGTGTAAAAGGATTGAAAGATGCTTGGCGTTTAGCTTTTCTACACGTTTAA

Upstream 100 bases:

>100_bases
TCATATCTCCTACTAAGAATACCTTACCTTTCAATTAAACATCTTTTGTCCGCAAAATTTGAGGATGTAATTACTGTATA
TTTCTAATTCATTGGTATAA

Downstream 100 bases:

>100_bases
TACGAAAGACTTAAGAAAATATAGGAGCGGAATGATTGACAGTCGATCTAAAAATTTTTCGAATAAATTAGCTTAAGTAT
GCTTTTTAACATTTACTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MIGTTGFEPATYCSQKTRSKLEGIRPIFFMTKWNEKSWQKDSLSMKSYSPSDAKLLMGGVKGLKDAWRLAFLHV

Sequences:

>Translated_74_residues
MIGTTGFEPATYCSQKTRSKLEGIRPIFFMTKWNEKSWQKDSLSMKSYSPSDAKLLMGGVKGLKDAWRLAFLHV
>Mature_74_residues
MIGTTGFEPATYCSQKTRSKLEGIRPIFFMTKWNEKSWQKDSLSMKSYSPSDAKLLMGGVKGLKDAWRLAFLHV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8432; Mature: 8432

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGTTGFEPATYCSQKTRSKLEGIRPIFFMTKWNEKSWQKDSLSMKSYSPSDAKLLMGGV
CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
KGLKDAWRLAFLHV
HHHHHHHHHHHCCC
>Mature Secondary Structure
MIGTTGFEPATYCSQKTRSKLEGIRPIFFMTKWNEKSWQKDSLSMKSYSPSDAKLLMGGV
CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
KGLKDAWRLAFLHV
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA