| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
Click here to switch to the map view.
The map label for this gene is 78779137
Identifier: 78779137
GI number: 78779137
Start: 698204
End: 699421
Strand: Reverse
Name: 78779137
Synonym: PMT9312_0753
Alternate gene names: NA
Gene position: 699421-698204 (Counterclockwise)
Preceding gene: 78779138
Following gene: 78779135
Centisome position: 40.92
GC content: 25.62
Gene sequence:
>1218_bases ATGTTAAAAAGATATTTTTTAAATCATAAACAAAGAAATTTTTCTACTGCTTCAATTTGGATTAAAGGGGGTAGTGATAT GGATAGTGTTAGCAAAAAAGGTATTAACAAGATCCTTTGTTCATTACTTACCCGCGGATGTGAAGGTTTTGATAATTACT TTCTATCTGAGTATATTGAATCCTATGGAGCAGAATTAAGTCAAGAAGTATTTGAAGATGGAATTTCAATAAGCATTAAA TCCCTAAATGAACATTTCAGTAAATTATTTCCTTTATTAGATTTAATTATTAATAAGCCAATTCTCTCAGAAATTGAATT TCAAAAAGTAAAAAAGTCCTCTATTGATCTCATTAAAAAAGATAAAGAGAATCCATTCAATATTTGTTTTGAAAAATGGA GAAAACTAGTTTACAAAAGTCATCCTTACGCCTTCAATACAATTGGCAATGCAAATGATATCTCAAAAATTACCTATAAA GATGTTCTATTTGAGTTTAAAAATTTCAAAAGTAGAGAAAAATATTTAATTTCAAATAATTCAGAAATAATTGGAGAAAA CTTACCAACATTAGAAAAAAAAATTCTAAAAGAAAAATCAGTACATTTAAATTACGATGTAAATCCTATAAATAGATTTG ATTACAAAAATAATGATTCAAATCAAACAATCATAATGATAGGGAACCAAACTTGTTCGCGTAGAAGTAATGAATACTTG CCACTTAAAGTTTTGGAATCATATTTATCTTATGGAATGAGCGCTGCTTTATTTAAACTTTTTAGAGAAAAAAATGGAAT CACTTATGATCTAGGTGTTTATTATCCTGTTAGGAATGGCAATGCACCATTTTTAATTTACTTATCAGTATCAAATAAAA ATGCCGTTTTTGCTTTTGAACTTTTATCATCACTATGGAAAAATTTACTTTTAGACCGGTTGATTGATGATGAAATATTT TTAGCTAAAGAAAAATTAAAAGGTTCTTTTCTTTTGGGAAATCAATCTCTAGATGAAATTTTACAAAGAAAGATTCAGTT AATTAGTTATGGAATTTCACCTATTTCAGAAATTGATTTAAATTCAAAAATAGACGAAATATCTTCATTAGATATTATTA AATTGACTAATAAATATTTTTCGAAACCTTTCTTAAGTCTATCTGGGAATAAAAAAATTTGTTTAGAAATTAAAACTAGT TGGATCAAAAACTTTTAG
Upstream 100 bases:
>100_bases TAAAAGGTCATTTAAAGTATTGGAAGGATTTGGGGAATTTTAAAGAGATCATAAATTATATTCATGGAGATAAATTCACC TTAATAGTATCCCCTAGTAA
Downstream 100 bases:
>100_bases TTTAGACTCTCTCAATCCTATCAATTTCTATCAGAAAGGATCCTCTTCTAAACTTTACTTCCACAGTATCTAGAGATTTT ATTGATATGATTTCTCCAAT
Product: insulinase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MLKRYFLNHKQRNFSTASIWIKGGSDMDSVSKKGINKILCSLLTRGCEGFDNYFLSEYIESYGAELSQEVFEDGISISIK SLNEHFSKLFPLLDLIINKPILSEIEFQKVKKSSIDLIKKDKENPFNICFEKWRKLVYKSHPYAFNTIGNANDISKITYK DVLFEFKNFKSREKYLISNNSEIIGENLPTLEKKILKEKSVHLNYDVNPINRFDYKNNDSNQTIIMIGNQTCSRRSNEYL PLKVLESYLSYGMSAALFKLFREKNGITYDLGVYYPVRNGNAPFLIYLSVSNKNAVFAFELLSSLWKNLLLDRLIDDEIF LAKEKLKGSFLLGNQSLDEILQRKIQLISYGISPISEIDLNSKIDEISSLDIIKLTNKYFSKPFLSLSGNKKICLEIKTS WIKNF
Sequences:
>Translated_405_residues MLKRYFLNHKQRNFSTASIWIKGGSDMDSVSKKGINKILCSLLTRGCEGFDNYFLSEYIESYGAELSQEVFEDGISISIK SLNEHFSKLFPLLDLIINKPILSEIEFQKVKKSSIDLIKKDKENPFNICFEKWRKLVYKSHPYAFNTIGNANDISKITYK DVLFEFKNFKSREKYLISNNSEIIGENLPTLEKKILKEKSVHLNYDVNPINRFDYKNNDSNQTIIMIGNQTCSRRSNEYL PLKVLESYLSYGMSAALFKLFREKNGITYDLGVYYPVRNGNAPFLIYLSVSNKNAVFAFELLSSLWKNLLLDRLIDDEIF LAKEKLKGSFLLGNQSLDEILQRKIQLISYGISPISEIDLNSKIDEISSLDIIKLTNKYFSKPFLSLSGNKKICLEIKTS WIKNF >Mature_405_residues MLKRYFLNHKQRNFSTASIWIKGGSDMDSVSKKGINKILCSLLTRGCEGFDNYFLSEYIESYGAELSQEVFEDGISISIK SLNEHFSKLFPLLDLIINKPILSEIEFQKVKKSSIDLIKKDKENPFNICFEKWRKLVYKSHPYAFNTIGNANDISKITYK DVLFEFKNFKSREKYLISNNSEIIGENLPTLEKKILKEKSVHLNYDVNPINRFDYKNNDSNQTIIMIGNQTCSRRSNEYL PLKVLESYLSYGMSAALFKLFREKNGITYDLGVYYPVRNGNAPFLIYLSVSNKNAVFAFELLSSLWKNLLLDRLIDDEIF LAKEKLKGSFLLGNQSLDEILQRKIQLISYGISPISEIDLNSKIDEISSLDIIKLTNKYFSKPFLSLSGNKKICLEIKTS WIKNF
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 46829; Mature: 46829
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRYFLNHKQRNFSTASIWIKGGSDMDSVSKKGINKILCSLLTRGCEGFDNYFLSEYIE CCCCHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH SYGAELSQEVFEDGISISIKSLNEHFSKLFPLLDLIINKPILSEIEFQKVKKSSIDLIKK HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC DKENPFNICFEKWRKLVYKSHPYAFNTIGNANDISKITYKDVLFEFKNFKSREKYLISNN CCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCC SEIIGENLPTLEKKILKEKSVHLNYDVNPINRFDYKNNDSNQTIIMIGNQTCSRRSNEYL CCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCHHCCCCCCCC PLKVLESYLSYGMSAALFKLFREKNGITYDLGVYYPVRNGNAPFLIYLSVSNKNAVFAFE CHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCHHHH LLSSLWKNLLLDRLIDDEIFLAKEKLKGSFLLGNQSLDEILQRKIQLISYGISPISEIDL HHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCHHHCCC NSKIDEISSLDIIKLTNKYFSKPFLSLSGNKKICLEIKTSWIKNF CCCHHHHHCCHHHHHHHHHHCCCCEEECCCCEEEEEEEHHHHCCC >Mature Secondary Structure MLKRYFLNHKQRNFSTASIWIKGGSDMDSVSKKGINKILCSLLTRGCEGFDNYFLSEYIE CCCCHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH SYGAELSQEVFEDGISISIKSLNEHFSKLFPLLDLIINKPILSEIEFQKVKKSSIDLIKK HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC DKENPFNICFEKWRKLVYKSHPYAFNTIGNANDISKITYKDVLFEFKNFKSREKYLISNN CCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCC SEIIGENLPTLEKKILKEKSVHLNYDVNPINRFDYKNNDSNQTIIMIGNQTCSRRSNEYL CCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCHHCCCCCCCC PLKVLESYLSYGMSAALFKLFREKNGITYDLGVYYPVRNGNAPFLIYLSVSNKNAVFAFE CHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCHHHH LLSSLWKNLLLDRLIDDEIFLAKEKLKGSFLLGNQSLDEILQRKIQLISYGISPISEIDL HHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCHHHCCC NSKIDEISSLDIIKLTNKYFSKPFLSLSGNKKICLEIKTSWIKNF CCCHHHHHCCHHHHHHHHHHCCCCEEECCCCEEEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]