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The map label for this gene is srpC [H]

Identifier: 78779107

GI number: 78779107

Start: 673712

End: 674938

Strand: Reverse

Name: srpC [H]

Synonym: PMT9312_0723

Alternate gene names: 78779107

Gene position: 674938-673712 (Counterclockwise)

Preceding gene: 78779108

Following gene: 78779105

Centisome position: 39.49

GC content: 26.24

Gene sequence:

>1227_bases
ATGGCAAAAATATCCTTAATTGAACTTGCAAAAATTTTTCTAAAAATTGGTATTTTCAGTTTTGGAGGACCATATGCTCA
TATTTCTTTATTCGAAGATGAAATTATAAATAGTAAAAAATTGATCTCAACCAAATCTTTTGAAAAAGGTATTGGTTTAT
GTCAATTGCTTCCAGGGCCAATATCCACTCAATTAGCAATATATATAGGTCTTAAAATTAATGGTTATCTTGGTGGATTA
ATATCCGGTATATGTTTCATTATCCCAGGATTCATTTCGGTATTAGTTCTTAGCTTTTTTTGGCAAATTTATTCTGGATC
AAAATTTCTTAATGATTTAATTTATTTTAATCCTCCTATTATTGCAGGAATAATTTTTTCATTTTCATTAGTTCTTTTAA
AAAAAAGATTAAAGTTAGATCGAATATTATTCTCTAGCTCAATCTTATCTCTCCTTATATTTGCAAAATATAATAGTATT
CAATTTCCTCTCATAACAATTCTTACTACTGCAGGTTTGATAAATATTTTCTTACAGAAATCGAAAAATATTTTTTATAA
CTTGGTTCCTTTATCTATATTTTCAACAACCTCATTTTTAACTAGCTCAATCTTTTTGGATATTGCCAAGTTTTATAATT
TTTTAAAGCTCTCTACAAACTCAAAGTTTTTAATAGATTATCTTAATCTGTTTTTTTTCTTCTTGAAATCGGGACTTTTT
ATTTTTGGAGGGGGATTAGTAATCATTCCTCTAATGAGTGATTATGTTGTCTCACAAGGATGGTTAACAAATAATGAATT
TATAGATGGGATAATGATTGGCCAGATAACACCTGGTCCTGTCTTATTAACTACAAGTTTTATTGGATACAAAGCTGGTT
TTTCGGTCGGAGGAATAAATGAAGCTTTAAAGTATTCATTTATATCAACTTTTGCAATTTTTTTACCAAGTTTTTTATTG
ATTTTTGTTTTTGGAAAAGGCTTCATAAAAAACAGAATTAAATCGATTAATTACTTTATCGAAGGAGTAATCAATACAAT
TCCAGGAGCAGTTATTTTTTCTGGCTTTAATTTAATTGAAGATAGTTTTTCATCAAAATTCTTTTTAATTAGCTCTATTT
TTATAGTTTTAATCTCCACACTATTATCTTTTTTTAAAATAGTTCCAACCTATATACTTATTCTTTTTTCTTTAATTTTA
GGTTTATCAAAATATTTGTTTGCATAA

Upstream 100 bases:

>100_bases
TCTAATATTATTCTCTTGGATTTCGAGTCTTAAATTACCATCAATCAAACAAAGCTTATCATCACCATAAAAGCTAATTT
TAAGAAATTAGAATATTTAG

Downstream 100 bases:

>100_bases
AAAAAGGAAGAAATAAATTCCTCCTTTTAAATATTGTCTTACGGTTTATTTACCGATTCTTTTTACAGCAGCTCTTGATT
TCTCAAGAATATCACCTTTC

Product: chromate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MAKISLIELAKIFLKIGIFSFGGPYAHISLFEDEIINSKKLISTKSFEKGIGLCQLLPGPISTQLAIYIGLKINGYLGGL
ISGICFIIPGFISVLVLSFFWQIYSGSKFLNDLIYFNPPIIAGIIFSFSLVLLKKRLKLDRILFSSSILSLLIFAKYNSI
QFPLITILTTAGLINIFLQKSKNIFYNLVPLSIFSTTSFLTSSIFLDIAKFYNFLKLSTNSKFLIDYLNLFFFFLKSGLF
IFGGGLVIIPLMSDYVVSQGWLTNNEFIDGIMIGQITPGPVLLTTSFIGYKAGFSVGGINEALKYSFISTFAIFLPSFLL
IFVFGKGFIKNRIKSINYFIEGVINTIPGAVIFSGFNLIEDSFSSKFFLISSIFIVLISTLLSFFKIVPTYILILFSLIL
GLSKYLFA

Sequences:

>Translated_408_residues
MAKISLIELAKIFLKIGIFSFGGPYAHISLFEDEIINSKKLISTKSFEKGIGLCQLLPGPISTQLAIYIGLKINGYLGGL
ISGICFIIPGFISVLVLSFFWQIYSGSKFLNDLIYFNPPIIAGIIFSFSLVLLKKRLKLDRILFSSSILSLLIFAKYNSI
QFPLITILTTAGLINIFLQKSKNIFYNLVPLSIFSTTSFLTSSIFLDIAKFYNFLKLSTNSKFLIDYLNLFFFFLKSGLF
IFGGGLVIIPLMSDYVVSQGWLTNNEFIDGIMIGQITPGPVLLTTSFIGYKAGFSVGGINEALKYSFISTFAIFLPSFLL
IFVFGKGFIKNRIKSINYFIEGVINTIPGAVIFSGFNLIEDSFSSKFFLISSIFIVLISTLLSFFKIVPTYILILFSLIL
GLSKYLFA
>Mature_407_residues
AKISLIELAKIFLKIGIFSFGGPYAHISLFEDEIINSKKLISTKSFEKGIGLCQLLPGPISTQLAIYIGLKINGYLGGLI
SGICFIIPGFISVLVLSFFWQIYSGSKFLNDLIYFNPPIIAGIIFSFSLVLLKKRLKLDRILFSSSILSLLIFAKYNSIQ
FPLITILTTAGLINIFLQKSKNIFYNLVPLSIFSTTSFLTSSIFLDIAKFYNFLKLSTNSKFLIDYLNLFFFFLKSGLFI
FGGGLVIIPLMSDYVVSQGWLTNNEFIDGIMIGQITPGPVLLTTSFIGYKAGFSVGGINEALKYSFISTFAIFLPSFLLI
FVFGKGFIKNRIKSINYFIEGVINTIPGAVIFSGFNLIEDSFSSKFFLISSIFIVLISTLLSFFKIVPTYILILFSLILG
LSKYLFA

Specific function: May function in the active transport of chromate into the cell under sulfur-deficient conditions [H]

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003370
- InterPro:   IPR014047 [H]

Pfam domain/function: PF02417 Chromate_transp [H]

EC number: NA

Molecular weight: Translated: 45452; Mature: 45321

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKISLIELAKIFLKIGIFSFGGPYAHISLFEDEIINSKKLISTKSFEKGIGLCQLLPGP
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCHHHHHHHHHHHCCCEEHCCCCC
ISTQLAIYIGLKINGYLGGLISGICFIIPGFISVLVLSFFWQIYSGSKFLNDLIYFNPPI
CCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHH
IAGIIFSFSLVLLKKRLKLDRILFSSSILSLLIFAKYNSIQFPLITILTTAGLINIFLQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
SKNIFYNLVPLSIFSTTSFLTSSIFLDIAKFYNFLKLSTNSKFLIDYLNLFFFFLKSGLF
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCE
IFGGGLVIIPLMSDYVVSQGWLTNNEFIDGIMIGQITPGPVLLTTSFIGYKAGFSVGGIN
EECCCEEEEEHHHHHHHHCCCCCCCCCCCCEEECCCCCCCEEEEEHHHHHHCCCCCCCHH
EALKYSFISTFAIFLPSFLLIFVFGKGFIKNRIKSINYFIEGVINTIPGAVIFSGFNLIE
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHH
DSFSSKFFLISSIFIVLISTLLSFFKIVPTYILILFSLILGLSKYLFA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKISLIELAKIFLKIGIFSFGGPYAHISLFEDEIINSKKLISTKSFEKGIGLCQLLPGP
CCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCHHHHHHHHHHHCCCEEHCCCCC
ISTQLAIYIGLKINGYLGGLISGICFIIPGFISVLVLSFFWQIYSGSKFLNDLIYFNPPI
CCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHH
IAGIIFSFSLVLLKKRLKLDRILFSSSILSLLIFAKYNSIQFPLITILTTAGLINIFLQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
SKNIFYNLVPLSIFSTTSFLTSSIFLDIAKFYNFLKLSTNSKFLIDYLNLFFFFLKSGLF
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCE
IFGGGLVIIPLMSDYVVSQGWLTNNEFIDGIMIGQITPGPVLLTTSFIGYKAGFSVGGIN
EECCCEEEEEHHHHHHHHCCCCCCCCCCCCEEECCCCCCCEEEEEHHHHHHCCCCCCCHH
EALKYSFISTFAIFLPSFLLIFVFGKGFIKNRIKSINYFIEGVINTIPGAVIFSGFNLIE
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHH
DSFSSKFFLISSIFIVLISTLLSFFKIVPTYILILFSLILGLSKYLFA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7536734 [H]