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The map label for this gene is 78779105

Identifier: 78779105

GI number: 78779105

Start: 671007

End: 672329

Strand: Reverse

Name: 78779105

Synonym: PMT9312_0721

Alternate gene names: NA

Gene position: 672329-671007 (Counterclockwise)

Preceding gene: 78779107

Following gene: 78779104

Centisome position: 39.34

GC content: 39.83

Gene sequence:

>1323_bases
ATGAAACTTTTTCAAAAATTAATAGCTGCTCCTGCCTTGATTTCTTTGGCATCAGGTTTCGCAGTAAACGCAACTGAGAT
CAATTCAACAGATCTTAGTGATTATTCAAACTCTAACAATCTAGTATCTTTAGGTGATTTTAAATCAGATACTTTATTCC
CAGGAGATTGGGCTTACGATTCATTAAAGGATCTAACAAATAGTCCAAAATTCAATGGGAACTCAGTTTCTCGTTTAGAA
GCTGCTGCTGAATTAAATAATCTAATTGCAGGTGGCGAAGGCTTAATGAACGGAGCTGCAATAGACAGGTTAAGTGATGA
GCTTGGTTCTGAGTTGGCAATTATGAAAGGAAGAGTGGATGGCCTTGAATCTCGTGTAAATACAATAGAGGCTGGCAGCT
TTTCATCAACCACATCAATGAAAGGAAAGGTGGAAGCAATGCTCGCAGCACAAAGTACAGATGCTGGTGCTAATGATGCA
GTAATGTTCAATTATCATTATGAAGTTGACTTAAATACAAGCTTCACAGGAGATGACAAATTAAATGTTGAAATTGCTGC
AGGTAATCAAGTAGCAAACTCAGTTGCCGCAGCCCATGACGCATTGGGCGAAACTAGTGATAATTTAGCAATAGAAGATG
TTAACTACACGTTCCCAGTAGGAGAATGGGCTTTATCTGTTGGTGAATCAATGGATGCTTCAAAGAACTGGCCAAATTCT
TGTAAGTACGGGAATGTTGTTGACAACATTGGTGATTGTGGTGCATCAAACTCTGTTGACTTAGGTGGTGATATATCAAT
AAGTGCAGGTAGAGATTTTGGTGACGGATGGTCATTTGGTCTCGGAGCTTCTGCCGATGATGGTGAAACCAATGCTGGAA
TGTTCACAGAGGAAGGAGATGATCGCTACGGTTTGGCTTTAGGTTATGAAAATGATACTTATGGAGTAACTTTGGCATAT
TCCAGTATCGAAGATGGAGCAGCTAACAACACCTACGTTGGAGCAACTGCTTATTATAATTTTGAACCCTTTACGCTAAG
TGGAGGTATTGAATGGATGGAAGCAGATCTTGCGACTGATGTGAACTCAGAACAGTGGACTGTAGGAATCACAACTGAAA
TGGGCCCAGGAGAAATTTCTGCAGGTATTGGTACTAATGGTGCTATAGATGACAATGCTGAGGATCTTCATGTCTATGAA
GTTAAATATAGCTACCCAGTAAACGACTCTGTGACCTTAGACACTTTTGCTTACATTGCTGAAACTGTTGCTGCTACTGA
TGACACAACTGCTGTAGGATTCCTTACTACATTTAAATTCTAA

Upstream 100 bases:

>100_bases
CTTTAAATTTTTCTATTTACTTTTGATCCTTATTCATTTCTTAACCTAAAACCGTTGAAATAACAATTGGATATTAATCC
ATTTTTACGTGTTGAGGTTT

Downstream 100 bases:

>100_bases
TCAGAATACCCAAATCAAAAGGACCTCCATTTAGGAGGTCCTTTTTTTTTGCTTACTTCCTATAAACCTTAAATTGTTCT
TAATAAATCTATTTTTTTTT

Product: porin precursor-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MKLFQKLIAAPALISLASGFAVNATEINSTDLSDYSNSNNLVSLGDFKSDTLFPGDWAYDSLKDLTNSPKFNGNSVSRLE
AAAELNNLIAGGEGLMNGAAIDRLSDELGSELAIMKGRVDGLESRVNTIEAGSFSSTTSMKGKVEAMLAAQSTDAGANDA
VMFNYHYEVDLNTSFTGDDKLNVEIAAGNQVANSVAAAHDALGETSDNLAIEDVNYTFPVGEWALSVGESMDASKNWPNS
CKYGNVVDNIGDCGASNSVDLGGDISISAGRDFGDGWSFGLGASADDGETNAGMFTEEGDDRYGLALGYENDTYGVTLAY
SSIEDGAANNTYVGATAYYNFEPFTLSGGIEWMEADLATDVNSEQWTVGITTEMGPGEISAGIGTNGAIDDNAEDLHVYE
VKYSYPVNDSVTLDTFAYIAETVAATDDTTAVGFLTTFKF

Sequences:

>Translated_440_residues
MKLFQKLIAAPALISLASGFAVNATEINSTDLSDYSNSNNLVSLGDFKSDTLFPGDWAYDSLKDLTNSPKFNGNSVSRLE
AAAELNNLIAGGEGLMNGAAIDRLSDELGSELAIMKGRVDGLESRVNTIEAGSFSSTTSMKGKVEAMLAAQSTDAGANDA
VMFNYHYEVDLNTSFTGDDKLNVEIAAGNQVANSVAAAHDALGETSDNLAIEDVNYTFPVGEWALSVGESMDASKNWPNS
CKYGNVVDNIGDCGASNSVDLGGDISISAGRDFGDGWSFGLGASADDGETNAGMFTEEGDDRYGLALGYENDTYGVTLAY
SSIEDGAANNTYVGATAYYNFEPFTLSGGIEWMEADLATDVNSEQWTVGITTEMGPGEISAGIGTNGAIDDNAEDLHVYE
VKYSYPVNDSVTLDTFAYIAETVAATDDTTAVGFLTTFKF
>Mature_440_residues
MKLFQKLIAAPALISLASGFAVNATEINSTDLSDYSNSNNLVSLGDFKSDTLFPGDWAYDSLKDLTNSPKFNGNSVSRLE
AAAELNNLIAGGEGLMNGAAIDRLSDELGSELAIMKGRVDGLESRVNTIEAGSFSSTTSMKGKVEAMLAAQSTDAGANDA
VMFNYHYEVDLNTSFTGDDKLNVEIAAGNQVANSVAAAHDALGETSDNLAIEDVNYTFPVGEWALSVGESMDASKNWPNS
CKYGNVVDNIGDCGASNSVDLGGDISISAGRDFGDGWSFGLGASADDGETNAGMFTEEGDDRYGLALGYENDTYGVTLAY
SSIEDGAANNTYVGATAYYNFEPFTLSGGIEWMEADLATDVNSEQWTVGITTEMGPGEISAGIGTNGAIDDNAEDLHVYE
VKYSYPVNDSVTLDTFAYIAETVAATDDTTAVGFLTTFKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049
- InterPro:   IPR001119 [H]

Pfam domain/function: PF04966 OprB; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 46322; Mature: 46322

Theoretical pI: Translated: 3.66; Mature: 3.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFQKLIAAPALISLASGFAVNATEINSTDLSDYSNSNNLVSLGDFKSDTLFPGDWAYD
CHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHH
SLKDLTNSPKFNGNSVSRLEAAAELNNLIAGGEGLMNGAAIDRLSDELGSELAIMKGRVD
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCHH
GLESRVNTIEAGSFSSTTSMKGKVEAMLAAQSTDAGANDAVMFNYHYEVDLNTSFTGDDK
HHHHHHCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCE
LNVEIAAGNQVANSVAAAHDALGETSDNLAIEDVNYTFPVGEWALSVGESMDASKNWPNS
EEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCEECCHHHHHHHHCCCCCCCCCCCCC
CKYGNVVDNIGDCGASNSVDLGGDISISAGRDFGDGWSFGLGASADDGETNAGMFTEEGD
CCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
DRYGLALGYENDTYGVTLAYSSIEDGAANNTYVGATAYYNFEPFTLSGGIEWMEADLATD
CCEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCEEECCCCEEEEHHHHCC
VNSEQWTVGITTEMGPGEISAGIGTNGAIDDNAEDLHVYEVKYSYPVNDSVTLDTFAYIA
CCCCEEEEEEEECCCCCCEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEHHHHHHHH
ETVAATDDTTAVGFLTTFKF
HHHHCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKLFQKLIAAPALISLASGFAVNATEINSTDLSDYSNSNNLVSLGDFKSDTLFPGDWAYD
CHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHH
SLKDLTNSPKFNGNSVSRLEAAAELNNLIAGGEGLMNGAAIDRLSDELGSELAIMKGRVD
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCHH
GLESRVNTIEAGSFSSTTSMKGKVEAMLAAQSTDAGANDAVMFNYHYEVDLNTSFTGDDK
HHHHHHCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCE
LNVEIAAGNQVANSVAAAHDALGETSDNLAIEDVNYTFPVGEWALSVGESMDASKNWPNS
EEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCEECCHHHHHHHHCCCCCCCCCCCCC
CKYGNVVDNIGDCGASNSVDLGGDISISAGRDFGDGWSFGLGASADDGETNAGMFTEEGD
CCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
DRYGLALGYENDTYGVTLAYSSIEDGAANNTYVGATAYYNFEPFTLSGGIEWMEADLATD
CCEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCEEECCCCEEEEHHHHCC
VNSEQWTVGITTEMGPGEISAGIGTNGAIDDNAEDLHVYEVKYSYPVNDSVTLDTFAYIA
CCCCEEEEEEEECCCCCCEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEHHHHHHHH
ETVAATDDTTAVGFLTTFKF
HHHHCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]