Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
---|---|
Accession | NC_007577 |
Length | 1,709,204 |
Click here to switch to the map view.
The map label for this gene is ptxB [H]
Identifier: 78779058
GI number: 78779058
Start: 634507
End: 635400
Strand: Reverse
Name: ptxB [H]
Synonym: PMT9312_0673
Alternate gene names: 78779058
Gene position: 635400-634507 (Counterclockwise)
Preceding gene: 78779059
Following gene: 78779057
Centisome position: 37.18
GC content: 29.19
Gene sequence:
>894_bases ATGTTCAATTTAAAAAATTTCTTACTAAGTTCATCTCTAATATTTTCTTTTTTTTCATCACCTTTATTTGCAAATCCAAA AGTTTTAAAAGTTGGAGCAATACCTGATCAAAACCAAGATATTTTGGACAAACGATTTAATTTATTTTCGAAAGAATTAT CCAAACAACTTGATGTAAAAGTTAAATACATTCCTGTTATTAATTACGTTGCAGCAGTAACTGGATTTAGAATTAAAGAT TTAGATTTAGTTTGGTTTGGCGGTTTATCAGGAGTTCAAGCAAGATTACAATCTCCTAATTCAATTGTCATAGCTCAAAG AGATATCGATAAGGAATTTAAAAGTGTTTTTATAGTAAACAAAAATTTAGAAATTAACTCAATTTCAAACATTAAAGGAC TTAAAAAGCTAAAGAATTTAAGATTTACCTTTGGCTCTGAAAACTCAACTTCTGGAAGATTAATGCCAGAATATTTCTTA AATCAAGCAGGGGTAGAAATTAAACACTTTAAAGGGGGAAAAGCAGGTTTTAGTGGGAGTCATGATGCCACTATAGCTTT AGTAAATAGTGGGGCATTTGATGCTGGAGCTTTAAATAAACAAGTTTGGGAAATCAATCTTAAAAATAATCCCAAAAGAA CAACTAACCTAGAATTATTCTGGATCACCCCTGAATATGTTGACTATCATTGGTTGGCTCAAGGGGATCTTGAAAATAGA TTCGGGAAAGGGTTTACAAAACAACTTAAATCAGTAATTCTAAATTTAGATATAAAACAAAAATCACATAAACAGATATT AGATATGTTCAATGCAAAAAGATTTATTAATGCAGAAGCAAAGCAGTATAAAAATATAGAGAAGATCGGGAGGAAATTAA ATAAAATTAGATGA
Upstream 100 bases:
>100_bases TGTATAAGAATTTCTTGTGCCACTTCAGAGATTAAAATTAAGGATGGTTTAGAAAGATTTAAAAAAGCAATCTCTAAATA CTTTTAATTTCAACTAAACA
Downstream 100 bases:
>100_bases ATAATACTCTCTTAGAATTAAAAAATATATCTTTTAAATACAAAAATAATCTAATTCTAAATAAAGTAAATTTAAAAATA AATTCAGGGGAGAAAATTGC
Product: phosphonate-binding periplasmic protein
Products: 3-phospho-serine [Cytoplasm]; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MFNLKNFLLSSSLIFSFFSSPLFANPKVLKVGAIPDQNQDILDKRFNLFSKELSKQLDVKVKYIPVINYVAAVTGFRIKD LDLVWFGGLSGVQARLQSPNSIVIAQRDIDKEFKSVFIVNKNLEINSISNIKGLKKLKNLRFTFGSENSTSGRLMPEYFL NQAGVEIKHFKGGKAGFSGSHDATIALVNSGAFDAGALNKQVWEINLKNNPKRTTNLELFWITPEYVDYHWLAQGDLENR FGKGFTKQLKSVILNLDIKQKSHKQILDMFNAKRFINAEAKQYKNIEKIGRKLNKIR
Sequences:
>Translated_297_residues MFNLKNFLLSSSLIFSFFSSPLFANPKVLKVGAIPDQNQDILDKRFNLFSKELSKQLDVKVKYIPVINYVAAVTGFRIKD LDLVWFGGLSGVQARLQSPNSIVIAQRDIDKEFKSVFIVNKNLEINSISNIKGLKKLKNLRFTFGSENSTSGRLMPEYFL NQAGVEIKHFKGGKAGFSGSHDATIALVNSGAFDAGALNKQVWEINLKNNPKRTTNLELFWITPEYVDYHWLAQGDLENR FGKGFTKQLKSVILNLDIKQKSHKQILDMFNAKRFINAEAKQYKNIEKIGRKLNKIR >Mature_297_residues MFNLKNFLLSSSLIFSFFSSPLFANPKVLKVGAIPDQNQDILDKRFNLFSKELSKQLDVKVKYIPVINYVAAVTGFRIKD LDLVWFGGLSGVQARLQSPNSIVIAQRDIDKEFKSVFIVNKNLEINSISNIKGLKKLKNLRFTFGSENSTSGRLMPEYFL NQAGVEIKHFKGGKAGFSGSHDATIALVNSGAFDAGALNKQVWEINLKNNPKRTTNLELFWITPEYVDYHWLAQGDLENR FGKGFTKQLKSVILNLDIKQKSHKQILDMFNAKRFINAEAKQYKNIEKIGRKLNKIR
Specific function: Probably forms part of a binding-protein-dependent phosphite transporter. Required for oxidation of phosphite to phosphate [H]
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790543, Length=227, Percent_Identity=27.7533039647577, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR005770 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 33755; Mature: 33755
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNLKNFLLSSSLIFSFFSSPLFANPKVLKVGAIPDQNQDILDKRFNLFSKELSKQLDVK CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCE VKYIPVINYVAAVTGFRIKDLDLVWFGGLSGVQARLQSPNSIVIAQRDIDKEFKSVFIVN EEEEHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHCCCCEEEEEECHHHHHHHEEEEEE KNLEINSISNIKGLKKLKNLRFTFGSENSTSGRLMPEYFLNQAGVEIKHFKGGKAGFSGS CCCEECCCHHHHHHHHHHHCEEEECCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCC HDATIALVNSGAFDAGALNKQVWEINLKNNPKRTTNLELFWITPEYVDYHWLAQGDLENR CCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECHHHCCEEEEECCCHHHH FGKGFTKQLKSVILNLDIKQKSHKQILDMFNAKRFINAEAKQYKNIEKIGRKLNKIR HCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFNLKNFLLSSSLIFSFFSSPLFANPKVLKVGAIPDQNQDILDKRFNLFSKELSKQLDVK CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCE VKYIPVINYVAAVTGFRIKDLDLVWFGGLSGVQARLQSPNSIVIAQRDIDKEFKSVFIVN EEEEHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHCCCCEEEEEECHHHHHHHEEEEEE KNLEINSISNIKGLKKLKNLRFTFGSENSTSGRLMPEYFLNQAGVEIKHFKGGKAGFSGS CCCEECCCHHHHHHHHHHHCEEEECCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCC HDATIALVNSGAFDAGALNKQVWEINLKNNPKRTTNLELFWITPEYVDYHWLAQGDLENR CCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECHHHCCEEEEECCCHHHH FGKGFTKQLKSVILNLDIKQKSHKQILDMFNAKRFINAEAKQYKNIEKIGRKLNKIR HCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9791102 [H]