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The map label for this gene is 78779038

Identifier: 78779038

GI number: 78779038

Start: 616428

End: 616862

Strand: Direct

Name: 78779038

Synonym: PMT9312_0653

Alternate gene names: NA

Gene position: 616428-616862 (Clockwise)

Preceding gene: 78779034

Following gene: 78779041

Centisome position: 36.07

GC content: 27.82

Gene sequence:

>435_bases
TTGAATCAAATATTCCAGAGACTCTCATCAGTATTTTTGTATACTCTTCCCTTAAAGGCTTCAATACCTTTTGGATATTA
TTTGTTCTATAAATATTCTTTTTTAAAGATACTATTATTACTAACTTTCCCAATAGCAATAATTGAAAAATCATTGCCTT
TTGGTAGCTTTTTGTTATTTATAATTTTATTTGCAGGATTAGCAAGAAATCCAAAAGTGCCCTATTTCGTTAGATATAAC
GCATGCCAAGCATTACTTATTGATATTGCTTTGATCATAATTTCATACCTCATGAGAATATTCCCCATAGTTGAACTGGG
CTCAATTATTTTTATATTTACACTCTGCATTTTTATTTATTCTATTTCTCAATGTATATATGGGGTTGAACCTGAAATAC
CATTAATTAGTAAATCTGTAAGAATGCAAATATAA

Upstream 100 bases:

>100_bases
TATTTAACAACCATCTGCCAAAGTTGATGTTTCGAGGTTAAGTCTTTAAATACGTACAGAAAATTAGGTTAAAATATAAG
TACCAAATTTTAAAAATATA

Downstream 100 bases:

>100_bases
AAAAAATTATTTTTAGATTTACTGAAATTTTTAGCACTCATTCAGAATAGATTCCCATCTTTGTTGACTTGCTTTTATTG
CTTGTATTGGTGGTTTAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MNQIFQRLSSVFLYTLPLKASIPFGYYLFYKYSFLKILLLLTFPIAIIEKSLPFGSFLLFIILFAGLARNPKVPYFVRYN
ACQALLIDIALIIISYLMRIFPIVELGSIIFIFTLCIFIYSISQCIYGVEPEIPLISKSVRMQI

Sequences:

>Translated_144_residues
MNQIFQRLSSVFLYTLPLKASIPFGYYLFYKYSFLKILLLLTFPIAIIEKSLPFGSFLLFIILFAGLARNPKVPYFVRYN
ACQALLIDIALIIISYLMRIFPIVELGSIIFIFTLCIFIYSISQCIYGVEPEIPLISKSVRMQI
>Mature_144_residues
MNQIFQRLSSVFLYTLPLKASIPFGYYLFYKYSFLKILLLLTFPIAIIEKSLPFGSFLLFIILFAGLARNPKVPYFVRYN
ACQALLIDIALIIISYLMRIFPIVELGSIIFIFTLCIFIYSISQCIYGVEPEIPLISKSVRMQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ycf60 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019109 [H]

Pfam domain/function: PF09685 Tic20 [H]

EC number: NA

Molecular weight: Translated: 16644; Mature: 16644

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQIFQRLSSVFLYTLPLKASIPFGYYLFYKYSFLKILLLLTFPIAIIEKSLPFGSFLLF
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IILFAGLARNPKVPYFVRYNACQALLIDIALIIISYLMRIFPIVELGSIIFIFTLCIFIY
HHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SISQCIYGVEPEIPLISKSVRMQI
HHHHHHHCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MNQIFQRLSSVFLYTLPLKASIPFGYYLFYKYSFLKILLLLTFPIAIIEKSLPFGSFLLF
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IILFAGLARNPKVPYFVRYNACQALLIDIALIIISYLMRIFPIVELGSIIFIFTLCIFIY
HHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SISQCIYGVEPEIPLISKSVRMQI
HHHHHHHCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]