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The map label for this gene is yjcF [C]

Identifier: 78779034

GI number: 78779034

Start: 614246

End: 614719

Strand: Direct

Name: yjcF [C]

Synonym: PMT9312_0649

Alternate gene names: 78779034

Gene position: 614246-614719 (Clockwise)

Preceding gene: 78779032

Following gene: 78779038

Centisome position: 35.94

GC content: 33.33

Gene sequence:

>474_bases
ATGAGATTTATCATTTTAACTGTTTTAATAATTGTTTTAACCCTCCCTTTTAGAAGCTTCGCTGCGTTGGATTATGGTAA
ACAATCCTTGGTAGGAGCTGATTTTTCTGGATCTGATTTAAAAGGAGCAACTTTCTATTTGACTGATTTACAAGACGCAA
ATTTATCAGGTTGTGAGCTCCAAAATGCGACTCTTTATGGAGCAAAATTGAAAGATACTAATTTAAGTAACTCCAATTTA
AGAGAAGTAACTTTAGACTCAGCTGTTTTAGATGGAACAGATTTATCAAATACTAACTTGGAGGATTCTTTTGCTTATAG
TACACAGTTTGAAAATGTAAAAATCCAAGGCGCAGACTTCACAAATGTTTTTTTGCCAAAAGATATTGTTAGGAAATTTT
GTGAAAGTGCCTCTGGCACTAATCCAATCACAAATAGAGATACCAGAGAAACTTTAGAGTGCGACTACATTTAA

Upstream 100 bases:

>100_bases
GTTCGTAATTTGTTATTTCAATAAATATAGCATTCAGTAAATAATTAATTTTTAGATTTCAGCTTAAGAAGTTAGAATTT
TTGAAATACTACTCAAAAAA

Downstream 100 bases:

>100_bases
ATTTATGCGCATACAAGTTCTTTTTTAATTTTTCTTTGTTTATAAAGTGATCTTCCAACAGGCCAACCTAAAGTAGATAA
ATGTCTCATTAAAGAACCTG

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: Pentapeptide Repeat Protein; RfrA Pentapeptide Repeat-Containing Protein; Pentapeptide Repeat Family Protein; Secreted Pentapeptide Repeats Protein; Endoribonuclease L-PSP

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MRFIILTVLIIVLTLPFRSFAALDYGKQSLVGADFSGSDLKGATFYLTDLQDANLSGCELQNATLYGAKLKDTNLSNSNL
REVTLDSAVLDGTDLSNTNLEDSFAYSTQFENVKIQGADFTNVFLPKDIVRKFCESASGTNPITNRDTRETLECDYI

Sequences:

>Translated_157_residues
MRFIILTVLIIVLTLPFRSFAALDYGKQSLVGADFSGSDLKGATFYLTDLQDANLSGCELQNATLYGAKLKDTNLSNSNL
REVTLDSAVLDGTDLSNTNLEDSFAYSTQFENVKIQGADFTNVFLPKDIVRKFCESASGTNPITNRDTRETLECDYI
>Mature_157_residues
MRFIILTVLIIVLTLPFRSFAALDYGKQSLVGADFSGSDLKGATFYLTDLQDANLSGCELQNATLYGAKLKDTNLSNSNL
REVTLDSAVLDGTDLSNTNLEDSFAYSTQFENVKIQGADFTNVFLPKDIVRKFCESASGTNPITNRDTRETLECDYI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17302; Mature: 17302

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFIILTVLIIVLTLPFRSFAALDYGKQSLVGADFSGSDLKGATFYLTDLQDANLSGCEL
CHHHHHHHHHHHHHCCCHHHHHHCCCCHHEECCCCCCCCCCCEEEEEEECCCCCCCCCEE
QNATLYGAKLKDTNLSNSNLREVTLDSAVLDGTDLSNTNLEDSFAYSTQFENVKIQGADF
CCCEEECCEECCCCCCCCCCEEEEECCEEECCCCCCCCCCCCCEEEEEECCCEEEECCCC
TNVFLPKDIVRKFCESASGTNPITNRDTRETLECDYI
CEEECCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCC
>Mature Secondary Structure
MRFIILTVLIIVLTLPFRSFAALDYGKQSLVGADFSGSDLKGATFYLTDLQDANLSGCEL
CHHHHHHHHHHHHHCCCHHHHHHCCCCHHEECCCCCCCCCCCEEEEEEECCCCCCCCCEE
QNATLYGAKLKDTNLSNSNLREVTLDSAVLDGTDLSNTNLEDSFAYSTQFENVKIQGADF
CCCEEECCEECCCCCCCCCCEEEEECCEEECCCCCCCCCCCCCEEEEEECCCEEEECCCC
TNVFLPKDIVRKFCESASGTNPITNRDTRETLECDYI
CEEECCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA