Click here to switch to the map view.

The map label for this gene is glgA

Identifier: 78778994

GI number: 78778994

Start: 573283

End: 574734

Strand: Direct

Name: glgA

Synonym: PMT9312_0609

Alternate gene names: 78778994

Gene position: 573283-574734 (Clockwise)

Preceding gene: 78778993

Following gene: 78778995

Centisome position: 33.54

GC content: 38.02

Gene sequence:

>1452_bases
ATGAGAATTCTTCTTGCCGCTGCTGAATGTGCTCCAATGATCAAAGTTGGTGGAATGGGAGATGTAGTCGGTTCTTTGCC
TCCATCTTTGATAAAACTTGGTCACGATGTAAGGGTAATAATTCCAGGCTATGGTAAATTGTGGAGTCTTTTGGAGGTAT
CGAATGAACCAGTCTTCAGAGCAAATACTATGGGGACTGATTTTGCTGTGTATGAAGCAAAACATCCAATACATAATTAT
GTGATTTACCTAGTTGGGCATCCAATATTTGACTCTGACCAAATATATGGAGGAGAGAATGAAGATTGGCGCTTTACATT
TTTTGCTAGTGCTACTTCCGAATTTGCTTGGAATTGTTGGAAACCTCAAGTTCTTCATTGCCATGATTGGCACACTGGAA
TGATTCCAGTATGGATGCATCAGGACCCTGAAATTAGCACTGTTTTTACGATTCATAATTTAAAATACCAAGGGCCTTGG
AGATGGAAATTAGAAAAAATGACTTGGTGTCCTTGGTATATGCATGGAGACCACACAATGGCTGCGGCTATGTTGTACGC
AGATAGAGTAAATGCTGTTTCTCCAACTTATGCTGATGAAATCAAAACCCATGAATATGGGGAAAGCCTTGAAGGATTAC
TAAATTATATATCGGGAAAATTACGGGGAATTCTTAATGGCATAGATCTAGATGAATGGAATCCAGCCAAAGATCCAGTT
TTGCCTGCCAAATTTAGTATCAATAATTTAAAAAATAGGACAGAAAATAAGAAAATTCTTCAGAGAGAAATGGGTCTTGA
AGTTAATCCTAAAAAATATCTTTTAGGTATGGTTAGTAGGTTGGTTGATCAGAAAGGAGTTGATTTACTTTTACAAGTTT
CAAGAAGACTTTTAGCATATACAGATTCGCAAATAGCTGTTTTAGGAACTGGAGATAGATATTTAGAGTCAGGATTATGG
CAACTGGCATTAGATTACCCGGGAAGATTTTCAGTATTCCTTACCTATGATGATTCTTTATCAAGACTTATATATGGGGG
GTCTGATGCATTCTTAATGCCAAGTAGATTCGAACCTTGTGGTATTAGTCAACTGCTCGCCATGAGGTATGGCTCTGTTC
CAATAGTAAGACGAGTTGGAGGGTTGGTTGACACAGTTTTGCCTCATGACCCTGAAAATAATAGCGGGACAGGTTTTTGC
TTTGATCGCTTTGAGCCTATAGATTTCTATACTTCTTTGGTGAGGTCTTGGGAAGCATTTAGACATAAAGATAGTTGGGA
ATTATTACAAAAAAGAGCTATGAGCCAAGAGTTCAGTTGGCAAAGATCAGCACTCGAATACGAAATGATGTATAAAGATG
TTTGCGGAATAAAGGAACCATCACCAGATGTTGCTGAAGTTGAAAAGTTCTCTTATGGACAATCTGCTGATCCATCATTA
AAAAAAGGATGA

Upstream 100 bases:

>100_bases
AAGGAAGAGATTCCTTTCTTGAAAAACGTTCACCTGATTTTTCAGACTATAAGTGGACTCCCTAGTTGATTTTTTCAAAA
GAACTTTTTTATAACTATCA

Downstream 100 bases:

>100_bases
CTTAATATTTTAATGGAATTCTCTTTATCAGAATTGAAAAATGTTTTGGGGGATATTAAAAATCTGAAAGAGGGGGGGGA
AGACTTTTTAAATTTTAAAA

Product: glycogen synthase

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase [H]

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MRILLAAAECAPMIKVGGMGDVVGSLPPSLIKLGHDVRVIIPGYGKLWSLLEVSNEPVFRANTMGTDFAVYEAKHPIHNY
VIYLVGHPIFDSDQIYGGENEDWRFTFFASATSEFAWNCWKPQVLHCHDWHTGMIPVWMHQDPEISTVFTIHNLKYQGPW
RWKLEKMTWCPWYMHGDHTMAAAMLYADRVNAVSPTYADEIKTHEYGESLEGLLNYISGKLRGILNGIDLDEWNPAKDPV
LPAKFSINNLKNRTENKKILQREMGLEVNPKKYLLGMVSRLVDQKGVDLLLQVSRRLLAYTDSQIAVLGTGDRYLESGLW
QLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPCGISQLLAMRYGSVPIVRRVGGLVDTVLPHDPENNSGTGFC
FDRFEPIDFYTSLVRSWEAFRHKDSWELLQKRAMSQEFSWQRSALEYEMMYKDVCGIKEPSPDVAEVEKFSYGQSADPSL
KKG

Sequences:

>Translated_483_residues
MRILLAAAECAPMIKVGGMGDVVGSLPPSLIKLGHDVRVIIPGYGKLWSLLEVSNEPVFRANTMGTDFAVYEAKHPIHNY
VIYLVGHPIFDSDQIYGGENEDWRFTFFASATSEFAWNCWKPQVLHCHDWHTGMIPVWMHQDPEISTVFTIHNLKYQGPW
RWKLEKMTWCPWYMHGDHTMAAAMLYADRVNAVSPTYADEIKTHEYGESLEGLLNYISGKLRGILNGIDLDEWNPAKDPV
LPAKFSINNLKNRTENKKILQREMGLEVNPKKYLLGMVSRLVDQKGVDLLLQVSRRLLAYTDSQIAVLGTGDRYLESGLW
QLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPCGISQLLAMRYGSVPIVRRVGGLVDTVLPHDPENNSGTGFC
FDRFEPIDFYTSLVRSWEAFRHKDSWELLQKRAMSQEFSWQRSALEYEMMYKDVCGIKEPSPDVAEVEKFSYGQSADPSL
KKG
>Mature_483_residues
MRILLAAAECAPMIKVGGMGDVVGSLPPSLIKLGHDVRVIIPGYGKLWSLLEVSNEPVFRANTMGTDFAVYEAKHPIHNY
VIYLVGHPIFDSDQIYGGENEDWRFTFFASATSEFAWNCWKPQVLHCHDWHTGMIPVWMHQDPEISTVFTIHNLKYQGPW
RWKLEKMTWCPWYMHGDHTMAAAMLYADRVNAVSPTYADEIKTHEYGESLEGLLNYISGKLRGILNGIDLDEWNPAKDPV
LPAKFSINNLKNRTENKKILQREMGLEVNPKKYLLGMVSRLVDQKGVDLLLQVSRRLLAYTDSQIAVLGTGDRYLESGLW
QLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPCGISQLLAMRYGSVPIVRRVGGLVDTVLPHDPENNSGTGFC
FDRFEPIDFYTSLVRSWEAFRHKDSWELLQKRAMSQEFSWQRSALEYEMMYKDVCGIKEPSPDVAEVEKFSYGQSADPSL
KKG

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose [H]

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789836, Length=478, Percent_Identity=34.3096234309623, Blast_Score=283, Evalue=1e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.21 [H]

Molecular weight: Translated: 55038; Mature: 55038

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLAAAECAPMIKVGGMGDVVGSLPPSLIKLGHDVRVIIPGYGKLWSLLEVSNEPVFR
CEEEEEECCCCCEEEECCCHHHHHCCCHHHHHCCCCEEEEECCCHHHHHHHHCCCCCEEE
ANTMGTDFAVYEAKHPIHNYVIYLVGHPIFDSDQIYGGENEDWRFTFFASATSEFAWNCW
ECCCCCCEEEEECCCCHHHEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCCC
KPQVLHCHDWHTGMIPVWMHQDPEISTVFTIHNLKYQGPWRWKLEKMTWCPWYMHGDHTM
CCCEEEEECCCCCCEEEEECCCCCCEEEEEEECEEECCCCEEEECCEEECEEEEECCHHH
AAAMLYADRVNAVSPTYADEIKTHEYGESLEGLLNYISGKLRGILNGIDLDEWNPAKDPV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
LPAKFSINNLKNRTENKKILQREMGLEVNPKKYLLGMVSRLVDQKGVDLLLQVSRRLLAY
CCCEEEHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
TDSQIAVLGTGDRYLESGLWQLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPC
CCCCEEEEECCHHHHHCCCEEEEECCCCEEEEEEEECCCCCCEEECCCCCEECCCCCCCC
GISQLLAMRYGSVPIVRRVGGLVDTVLPHDPENNSGTGFCFDRFEPIDFYTSLVRSWEAF
CHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHH
RHKDSWELLQKRAMSQEFSWQRSALEYEMMYKDVCGIKEPSPDVAEVEKFSYGQSADPSL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCC
KKG
CCC
>Mature Secondary Structure
MRILLAAAECAPMIKVGGMGDVVGSLPPSLIKLGHDVRVIIPGYGKLWSLLEVSNEPVFR
CEEEEEECCCCCEEEECCCHHHHHCCCHHHHHCCCCEEEEECCCHHHHHHHHCCCCCEEE
ANTMGTDFAVYEAKHPIHNYVIYLVGHPIFDSDQIYGGENEDWRFTFFASATSEFAWNCW
ECCCCCCEEEEECCCCHHHEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCCC
KPQVLHCHDWHTGMIPVWMHQDPEISTVFTIHNLKYQGPWRWKLEKMTWCPWYMHGDHTM
CCCEEEEECCCCCCEEEEECCCCCCEEEEEEECEEECCCCEEEECCEEECEEEEECCHHH
AAAMLYADRVNAVSPTYADEIKTHEYGESLEGLLNYISGKLRGILNGIDLDEWNPAKDPV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
LPAKFSINNLKNRTENKKILQREMGLEVNPKKYLLGMVSRLVDQKGVDLLLQVSRRLLAY
CCCEEEHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
TDSQIAVLGTGDRYLESGLWQLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPC
CCCCEEEEECCHHHHHCCCEEEEECCCCEEEEEEEECCCCCCEEECCCCCEECCCCCCCC
GISQLLAMRYGSVPIVRRVGGLVDTVLPHDPENNSGTGFCFDRFEPIDFYTSLVRSWEAF
CHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHH
RHKDSWELLQKRAMSQEFSWQRSALEYEMMYKDVCGIKEPSPDVAEVEKFSYGQSADPSL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCC
KKG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA