Click here to switch to the map view.

The map label for this gene is 78778960

Identifier: 78778960

GI number: 78778960

Start: 535347

End: 535667

Strand: Reverse

Name: 78778960

Synonym: PMT9312_0575

Alternate gene names: NA

Gene position: 535667-535347 (Counterclockwise)

Preceding gene: 78778961

Following gene: 78778958

Centisome position: 31.34

GC content: 27.1

Gene sequence:

>321_bases
ATGAGTAGATTATCTCAACAGGAAGAAAAAGAACTCGTCTCCTTTATTAAAGATTGGTTAAAATCTCATGGATTTAACCA
AAAAGATTTAGCAAATGAATTAAATATTAAATCGAGCAGAACCTCTGAGATTATTCTTAAAATTAAAGAATTATATAAAA
AAGGCGGTATGTTCAACATTGCAAAGAATCTCATAAAGATTGAACAAAATTGGTTAAACAATATAAAAAATGATTACCAA
GAGACAAAACAAACACCACCATATAACCAATTAGATATCGACTCTTTAGTAAATCAGATAAATCAAGACACTAGTAAATA
A

Upstream 100 bases:

>100_bases
AGCCCTCACAGCAGTACTTAGTATATGGAGCAAATATATGACTCCTTCAATAAGAGCAAGAGCAGAGATTAAGCTTAATA
AGTTATTCCCTTTTTATTGA

Downstream 100 bases:

>100_bases
ATATTTTTTAAAACATTCTATTTTAATAAGAAATAATATTCAAACTTCACTAAGAGTTTTCATAGAAATATATCACTCTT
AAAAACCAACCTTTTAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSRLSQQEEKELVSFIKDWLKSHGFNQKDLANELNIKSSRTSEIILKIKELYKKGGMFNIAKNLIKIEQNWLNNIKNDYQ
ETKQTPPYNQLDIDSLVNQINQDTSK

Sequences:

>Translated_106_residues
MSRLSQQEEKELVSFIKDWLKSHGFNQKDLANELNIKSSRTSEIILKIKELYKKGGMFNIAKNLIKIEQNWLNNIKNDYQ
ETKQTPPYNQLDIDSLVNQINQDTSK
>Mature_105_residues
SRLSQQEEKELVSFIKDWLKSHGFNQKDLANELNIKSSRTSEIILKIKELYKKGGMFNIAKNLIKIEQNWLNNIKNDYQE
TKQTPPYNQLDIDSLVNQINQDTSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12457; Mature: 12326

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLSQQEEKELVSFIKDWLKSHGFNQKDLANELNIKSSRTSEIILKIKELYKKGGMFNI
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHH
AKNLIKIEQNWLNNIKNDYQETKQTPPYNQLDIDSLVNQINQDTSK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SRLSQQEEKELVSFIKDWLKSHGFNQKDLANELNIKSSRTSEIILKIKELYKKGGMFNI
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHH
AKNLIKIEQNWLNNIKNDYQETKQTPPYNQLDIDSLVNQINQDTSK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA