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The map label for this gene is 78778958

Identifier: 78778958

GI number: 78778958

Start: 534391

End: 534747

Strand: Reverse

Name: 78778958

Synonym: PMT9312_0573

Alternate gene names: NA

Gene position: 534747-534391 (Counterclockwise)

Preceding gene: 78778960

Following gene: 78778953

Centisome position: 31.29

GC content: 36.69

Gene sequence:

>357_bases
ATGCTAACTGGTAGTGATCTTCTTGCAAAAGTTAAAGAGCTTGGTGATGTTAGCAAGTCTGACATTGTTCGAGCTTGTGG
ATATGTTTCCACCAAGAAAAATGGGGGTGAACGCCTAAATTTCACCGCATTTTATGAAGCATTACTAGAAGCAAAAGGAG
TTAATCTTGGTGACTCTGGAGTTGCAGGAATTGGCAAAGGAGGAAGAAAGCTAAGTTATATAGCTACAGTTCAAGGGAAC
GGAAATCTTTTGATTGGGAAAGCATATACAGCACTTTTAGATTTAAAAGCAGGTGATGAATTTGAAATTAAGCTTGGAAG
AAAACAAATAAGATTATTACCTACTGAAGAATCTTAA

Upstream 100 bases:

>100_bases
ATTTTTAAAGATAAATAATAGAATAAATATATACTAAATAATTGCATAGATTACACACAAATTGCTATCTTATTTAAGAA
GAACTTTCTTTTAATTAATT

Downstream 100 bases:

>100_bases
AGCTAACAAACATAAATTTGATACTTAATTTTTTAAATTACTAATTAGTTTTTTTATCAATATATTCGCTTTGTATTTAT
TTTTTTTGATCAGCAGCTAA

Product: transcriptional regulator AbrB

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MLTGSDLLAKVKELGDVSKSDIVRACGYVSTKKNGGERLNFTAFYEALLEAKGVNLGDSGVAGIGKGGRKLSYIATVQGN
GNLLIGKAYTALLDLKAGDEFEIKLGRKQIRLLPTEES

Sequences:

>Translated_118_residues
MLTGSDLLAKVKELGDVSKSDIVRACGYVSTKKNGGERLNFTAFYEALLEAKGVNLGDSGVAGIGKGGRKLSYIATVQGN
GNLLIGKAYTALLDLKAGDEFEIKLGRKQIRLLPTEES
>Mature_118_residues
MLTGSDLLAKVKELGDVSKSDIVRACGYVSTKKNGGERLNFTAFYEALLEAKGVNLGDSGVAGIGKGGRKLSYIATVQGN
GNLLIGKAYTALLDLKAGDEFEIKLGRKQIRLLPTEES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12507; Mature: 12507

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTGSDLLAKVKELGDVSKSDIVRACGYVSTKKNGGERLNFTAFYEALLEAKGVNLGDSG
CCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHCCCCCCCCC
VAGIGKGGRKLSYIATVQGNGNLLIGKAYTALLDLKAGDEFEIKLGRKQIRLLPTEES
CCCCCCCCCEEEEEEEEECCCCEEEEEHEEEEEECCCCCEEEEEECCEEEEEECCCCC
>Mature Secondary Structure
MLTGSDLLAKVKELGDVSKSDIVRACGYVSTKKNGGERLNFTAFYEALLEAKGVNLGDSG
CCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHCCCCCCCCC
VAGIGKGGRKLSYIATVQGNGNLLIGKAYTALLDLKAGDEFEIKLGRKQIRLLPTEES
CCCCCCCCCEEEEEEEEECCCCEEEEEHEEEEEECCCCCEEEEEECCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA