| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78778947
Identifier: 78778947
GI number: 78778947
Start: 524301
End: 524831
Strand: Direct
Name: 78778947
Synonym: PMT9312_0562
Alternate gene names: NA
Gene position: 524301-524831 (Clockwise)
Preceding gene: 78778946
Following gene: 78778950
Centisome position: 30.68
GC content: 32.39
Gene sequence:
>531_bases ATGATTTTTAGAAACCAAGGTTCATTAACAAAAAAATCGAACATTATATCGAGAGATAAGCTGATAGATATCTATGGCTT AAATTCTTATGAATTCACTCAAAAAAATAAAGAAGAAATATTTGTATGTAGTAAAAATAAAGAGTTAGATCTAATAGAAC TAGACCAACTTTTGCAAACTGTTGGTTGGAGCAGGCGACCTATAAGGAGAGTTAAAAGAGCTTTGGATTTTAGTATTTTG GTAGTTGGTTTATGGCGTCATGATGATAAATTTCCCAGACTAGTAGGATTTGCAAGATGCACTGGCGATGGAATTCTAGA AGCAACAGTTTGGGATGTGGCTGTTAATCCTGTCTATCAAGGACTAGGATTGGGTAAAGAAATAATGAAATATGTTCTAA AAGAATTAAAAAATATTGGTATTTCTAAAGTCACACTTTTTGCTGATGCGGAAGTGGTTACATTTTACAAAAGACAAGGT TGGATATTAGAACCAAGAGGTTCTAAATGTGCTTTTTGGTATGCAAATTAA
Upstream 100 bases:
>100_bases GATCATTAGTTGAAGAGGGAACACATAGTGAATTGAGACAGAAAAAGGGTTTATATTTTCAGCTCTCTGAGCTTCAACAA AAAGGATTTGCGAATTTTTA
Downstream 100 bases:
>100_bases TCATTTTTTGTAGTAGTCAGAATATATAGATTTTATCGATTCTCCTTTTAACCATCTTCTTCTAAATTTCCAGTTCTTAA GTGCTTGGAGAAAAATATTA
Product: putative acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MIFRNQGSLTKKSNIISRDKLIDIYGLNSYEFTQKNKEEIFVCSKNKELDLIELDQLLQTVGWSRRPIRRVKRALDFSIL VVGLWRHDDKFPRLVGFARCTGDGILEATVWDVAVNPVYQGLGLGKEIMKYVLKELKNIGISKVTLFADAEVVTFYKRQG WILEPRGSKCAFWYAN
Sequences:
>Translated_176_residues MIFRNQGSLTKKSNIISRDKLIDIYGLNSYEFTQKNKEEIFVCSKNKELDLIELDQLLQTVGWSRRPIRRVKRALDFSIL VVGLWRHDDKFPRLVGFARCTGDGILEATVWDVAVNPVYQGLGLGKEIMKYVLKELKNIGISKVTLFADAEVVTFYKRQG WILEPRGSKCAFWYAN >Mature_176_residues MIFRNQGSLTKKSNIISRDKLIDIYGLNSYEFTQKNKEEIFVCSKNKELDLIELDQLLQTVGWSRRPIRRVKRALDFSIL VVGLWRHDDKFPRLVGFARCTGDGILEATVWDVAVNPVYQGLGLGKEIMKYVLKELKNIGISKVTLFADAEVVTFYKRQG WILEPRGSKCAFWYAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 20323; Mature: 20323
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFRNQGSLTKKSNIISRDKLIDIYGLNSYEFTQKNKEEIFVCSKNKELDLIELDQLLQT CEECCCCCCCHHHCCCCCCCEEEEEECCCEECCCCCCCEEEEECCCCCCCHHHHHHHHHH VGWSRRPIRRVKRALDFSILVVGLWRHDDKFPRLVGFARCTGDGILEATVWDVAVNPVYQ HCCCCCHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEHHHHHHHHH GLGLGKEIMKYVLKELKNIGISKVTLFADAEVVTFYKRQGWILEPRGSKCAFWYAN HCCCCHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCEEECCCCCEEEEEECC >Mature Secondary Structure MIFRNQGSLTKKSNIISRDKLIDIYGLNSYEFTQKNKEEIFVCSKNKELDLIELDQLLQT CEECCCCCCCHHHCCCCCCCEEEEEECCCEECCCCCCCEEEEECCCCCCCHHHHHHHHHH VGWSRRPIRRVKRALDFSILVVGLWRHDDKFPRLVGFARCTGDGILEATVWDVAVNPVYQ HCCCCCHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEHHHHHHHHH GLGLGKEIMKYVLKELKNIGISKVTLFADAEVVTFYKRQGWILEPRGSKCAFWYAN HCCCCHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9563839; 12917486 [H]