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The map label for this gene is yjbQ [C]

Identifier: 78778878

GI number: 78778878

Start: 461057

End: 461512

Strand: Reverse

Name: yjbQ [C]

Synonym: PMT9312_0493

Alternate gene names: 78778878

Gene position: 461512-461057 (Counterclockwise)

Preceding gene: 78778881

Following gene: 78778877

Centisome position: 27.0

GC content: 27.41

Gene sequence:

>456_bases
ATGGAACAAATATTTTCAAAATTAGAATTTTTAACCAGTGGAGAGGGTTTTATTGACATCACAAATGATTTAAATTTATT
TATTGAAAAAAATAACTTTCATTCAGGAATTTTTAATTTAACTTCACTTCATACCAGTTGCAGCTTAACTATTAATGAGA
ATGCAGATCCAAATGTACTTAGGGACTTAAAAAAATATATGCAATCTATAGTTCCATATGATTCCTACCTAACATTATCA
AAAAATAGAGAAGAAATTTCATATAAACATTATCAAGAAGGGGCTGATGATATGCCAGCACATATTAAAACATCCTTAAC
AAACACTTGTTTATCTTTGAGTTTTCAAGATGGTAAAATAATACTTGGCACATGGCAAGCAGTTTATTTATGGGAACATC
GATTTGATCAAAAAGAAAGAATTATAAATGTACATATAATTGGTGAGAAAAAGTAA

Upstream 100 bases:

>100_bases
TTTTAATTAAATTTATTTTAAGATAAAAATTTTAATGACTGCAAAAAAACATACATTGTTTACTCATAATAGAATATTAA
TAAGTTGAGTTTTGACTTAT

Downstream 100 bases:

>100_bases
AATATTTATAATGTATTAAAGTCCAATTAGTTATTCAATGGAACCTTACCTTTTAAGAGATGAAGAATTGAAGGAATTAG
TTGTCAAAATACCTGGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MEQIFSKLEFLTSGEGFIDITNDLNLFIEKNNFHSGIFNLTSLHTSCSLTINENADPNVLRDLKKYMQSIVPYDSYLTLS
KNREEISYKHYQEGADDMPAHIKTSLTNTCLSLSFQDGKIILGTWQAVYLWEHRFDQKERIINVHIIGEKK

Sequences:

>Translated_151_residues
MEQIFSKLEFLTSGEGFIDITNDLNLFIEKNNFHSGIFNLTSLHTSCSLTINENADPNVLRDLKKYMQSIVPYDSYLTLS
KNREEISYKHYQEGADDMPAHIKTSLTNTCLSLSFQDGKIILGTWQAVYLWEHRFDQKERIINVHIIGEKK
>Mature_151_residues
MEQIFSKLEFLTSGEGFIDITNDLNLFIEKNNFHSGIFNLTSLHTSCSLTINENADPNVLRDLKKYMQSIVPYDSYLTLS
KNREEISYKHYQEGADDMPAHIKTSLTNTCLSLSFQDGKIILGTWQAVYLWEHRFDQKERIINVHIIGEKK

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=136, Percent_Identity=38.2352941176471, Blast_Score=94, Evalue=5e-21,
Organism=Drosophila melanogaster, GI221476589, Length=128, Percent_Identity=36.71875, Blast_Score=93, Evalue=6e-20,
Organism=Drosophila melanogaster, GI221476594, Length=120, Percent_Identity=38.3333333333333, Blast_Score=92, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 17507; Mature: 17507

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQIFSKLEFLTSGEGFIDITNDLNLFIEKNNFHSGIFNLTSLHTSCSLTINENADPNVL
CHHHHHHHHHHCCCCCEEEEECCEEEEEECCCCCCCCEEEEEECCEEEEEECCCCCHHHH
RDLKKYMQSIVPYDSYLTLSKNREEISYKHYQEGADDMPAHIKTSLTNTCLSLSFQDGKI
HHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHEEEEEECCCEE
ILGTWQAVYLWEHRFDQKERIINVHIIGEKK
EEEECEEEEEEHHCCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MEQIFSKLEFLTSGEGFIDITNDLNLFIEKNNFHSGIFNLTSLHTSCSLTINENADPNVL
CHHHHHHHHHHCCCCCEEEEECCEEEEEECCCCCCCCEEEEEECCEEEEEECCCCCHHHH
RDLKKYMQSIVPYDSYLTLSKNREEISYKHYQEGADDMPAHIKTSLTNTCLSLSFQDGKI
HHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHEEEEEECCCEE
ILGTWQAVYLWEHRFDQKERIINVHIIGEKK
EEEECEEEEEEHHCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]