| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is phhB
Identifier: 78778877
GI number: 78778877
Start: 460729
End: 461019
Strand: Reverse
Name: phhB
Synonym: PMT9312_0492
Alternate gene names: NA
Gene position: 461019-460729 (Counterclockwise)
Preceding gene: 78778878
Following gene: 78778876
Centisome position: 26.97
GC content: 32.3
Gene sequence:
>291_bases ATGGAACCTTACCTTTTAAGAGATGAAGAATTGAAGGAATTAGTTGTCAAAATACCTGGCTGGGAAATTAAGTCCGAACA AATCCAAAGAGAATTTAGCTTCGCTAATTTCATTGAAGCCTTCTCTTTTATGACGAAGGTTGCTTTAATCTGTGAGAAAT ACAACCACCATCCAAACTGGGAAAATATTTATTCAAAAGTAATCATCAGTTTAAATACACATGATTTGGGAGGCATTACA AATTTGGATCAAACATTAGCTTCAGAAATCAATAAAATTTTCGATCAATAA
Upstream 100 bases:
>100_bases GAACATCGATTTGATCAAAAAGAAAGAATTATAAATGTACATATAATTGGTGAGAAAAAGTAAAATATTTATAATGTATT AAAGTCCAATTAGTTATTCA
Downstream 100 bases:
>100_bases AATTACAAATTTGAATTTATTTAAAACAATTCGTAAAAATGTCTAAAAAGTTATTACCAGTTACGATTATTAGTGGATTT TTAGGTTCTGGCAAAACCAC
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD [H]
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MEPYLLRDEELKELVVKIPGWEIKSEQIQREFSFANFIEAFSFMTKVALICEKYNHHPNWENIYSKVIISLNTHDLGGIT NLDQTLASEINKIFDQ
Sequences:
>Translated_96_residues MEPYLLRDEELKELVVKIPGWEIKSEQIQREFSFANFIEAFSFMTKVALICEKYNHHPNWENIYSKVIISLNTHDLGGIT NLDQTLASEINKIFDQ >Mature_96_residues MEPYLLRDEELKELVVKIPGWEIKSEQIQREFSFANFIEAFSFMTKVALICEKYNHHPNWENIYSKVIISLNTHDLGGIT NLDQTLASEINKIFDQ
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI134133240, Length=81, Percent_Identity=51.8518518518518, Blast_Score=82, Evalue=1e-16, Organism=Homo sapiens, GI4557831, Length=96, Percent_Identity=40.625, Blast_Score=72, Evalue=7e-14, Organism=Caenorhabditis elegans, GI115533705, Length=94, Percent_Identity=45.7446808510638, Blast_Score=85, Evalue=9e-18, Organism=Drosophila melanogaster, GI45549100, Length=86, Percent_Identity=43.0232558139535, Blast_Score=76, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001533 [H]
Pfam domain/function: PF01329 Pterin_4a [H]
EC number: =4.2.1.96 [H]
Molecular weight: Translated: 11275; Mature: 11275
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPYLLRDEELKELVVKIPGWEIKSEQIQREFSFANFIEAFSFMTKVALICEKYNHHPNW CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH ENIYSKVIISLNTHDLGGITNLDQTLASEINKIFDQ HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MEPYLLRDEELKELVVKIPGWEIKSEQIQREFSFANFIEAFSFMTKVALICEKYNHHPNW CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH ENIYSKVIISLNTHDLGGITNLDQTLASEINKIFDQ HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA