| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78778843
Identifier: 78778843
GI number: 78778843
Start: 433391
End: 433891
Strand: Reverse
Name: 78778843
Synonym: PMT9312_0458
Alternate gene names: NA
Gene position: 433891-433391 (Counterclockwise)
Preceding gene: 78778844
Following gene: 78778841
Centisome position: 25.39
GC content: 30.54
Gene sequence:
>501_bases TTGTTTGCTTTGAAAGAAATAAAATCTAATTCAGAAGACAATACCAAAAAAGAACAATTCTCTTTAAAAAGAATTGGAAA TTTTATTAAAGAGGCAAGGTTAAGTAGAGATCAATCTGTTGAAGAACTGGCTTCTGATTTAAAAATTGGATCTCATCAAC TTAAAGCCATTGAAGAAGGTAATGAAGAAAAGCTACCTGAAAAAGTATTTGTCAAAGCAATGGTTCGTAGAATTTCACAG AAACTGAACCTTGATACAGAATTTATAATGAATGAATTCAAGACCGAGAGGCAAGAGATAAAAATACAAGAAATAGTAGA AGAAGTGGCTAAAAAAACTAATAAAACCAGACAATCTAAGGGTCTAAGTCCTGTAGGGTTCTTGATATCTATTTTAATTT CAGGCTTTCTCGGACTAGTCGCCTCATCCTTAATTTTCAATTTATTTTCAGAGTCTTTTCAGAATCAAACTCCAAAACAA GAAGTTATTAAAAAAAACTAA
Upstream 100 bases:
>100_bases AAGAGGTCTAATCTATACAATCCATCATATAGACATCTCTTTAGAAATAAATAATCGTAAAGTTGATAGAAAAATATTAA TCACTATAATTAGTAAAAAT
Downstream 100 bases:
>100_bases ATAACTTTTAAATCCAAATTCTTTAGTTCTTTTATTACATTACGGCATAATCCTAAGTTCCATTTTTCAAGTAGAAGATC ATGGTTTCTATTTAAAGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MFALKEIKSNSEDNTKKEQFSLKRIGNFIKEARLSRDQSVEELASDLKIGSHQLKAIEEGNEEKLPEKVFVKAMVRRISQ KLNLDTEFIMNEFKTERQEIKIQEIVEEVAKKTNKTRQSKGLSPVGFLISILISGFLGLVASSLIFNLFSESFQNQTPKQ EVIKKN
Sequences:
>Translated_166_residues MFALKEIKSNSEDNTKKEQFSLKRIGNFIKEARLSRDQSVEELASDLKIGSHQLKAIEEGNEEKLPEKVFVKAMVRRISQ KLNLDTEFIMNEFKTERQEIKIQEIVEEVAKKTNKTRQSKGLSPVGFLISILISGFLGLVASSLIFNLFSESFQNQTPKQ EVIKKN >Mature_166_residues MFALKEIKSNSEDNTKKEQFSLKRIGNFIKEARLSRDQSVEELASDLKIGSHQLKAIEEGNEEKLPEKVFVKAMVRRISQ KLNLDTEFIMNEFKTERQEIKIQEIVEEVAKKTNKTRQSKGLSPVGFLISILISGFLGLVASSLIFNLFSESFQNQTPKQ EVIKKN
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19006; Mature: 19006
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFALKEIKSNSEDNTKKEQFSLKRIGNFIKEARLSRDQSVEELASDLKIGSHQLKAIEEG CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC NEEKLPEKVFVKAMVRRISQKLNLDTEFIMNEFKTERQEIKIQEIVEEVAKKTNKTRQSK CHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLSPVGFLISILISGFLGLVASSLIFNLFSESFQNQTPKQEVIKKN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC >Mature Secondary Structure MFALKEIKSNSEDNTKKEQFSLKRIGNFIKEARLSRDQSVEELASDLKIGSHQLKAIEEG CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC NEEKLPEKVFVKAMVRRISQKLNLDTEFIMNEFKTERQEIKIQEIVEEVAKKTNKTRQSK CHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLSPVGFLISILISGFLGLVASSLIFNLFSESFQNQTPKQEVIKKN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA