Click here to switch to the map view.

The map label for this gene is yutI [H]

Identifier: 78778799

GI number: 78778799

Start: 392250

End: 392495

Strand: Reverse

Name: yutI [H]

Synonym: PMT9312_0414

Alternate gene names: 78778799

Gene position: 392495-392250 (Counterclockwise)

Preceding gene: 78778803

Following gene: 78778797

Centisome position: 22.96

GC content: 35.77

Gene sequence:

>246_bases
ATGAGTACTGAAACACTCTCGTTGACAAATGAAAATGTAGAAAAAGTCCTTGACGAGCTCAGACCTTTTTTAATATCTGA
TGGAGGTAATGTAGAAATTGCAGAAATAGATGGTCCAATTGTCAAAGTCAGACTCCAAGGTGCATGTGGTAGTTGCCCAA
GTAGTACTATGACTCTAAAAATGGGTATTGAAAGAAAGTTAAAAGAAATGATTCCTGAAATAAGCGAAGTTGTCCAGGTT
TTATAA

Upstream 100 bases:

>100_bases
GTCATTAGTGGGATTTTTAGATGAAGTCACAACAGAAAATTATCTTTTTTGCAATTAATCAGATTTCTTTCTAGGCTTAT
TATAAAGTTAATCCAAAATT

Downstream 100 bases:

>100_bases
AAATTTTTAACTGAAAAAATATTATTTAGTTTTTAATTCCTTCAACAAAGAAGATTCCATATCAAGGCAATCAATTGGAA
GTCCTTGCCCAATAGCGATT

Product: NifU-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MSTETLSLTNENVEKVLDELRPFLISDGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLKMGIERKLKEMIPEISEVVQV
L

Sequences:

>Translated_81_residues
MSTETLSLTNENVEKVLDELRPFLISDGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLKMGIERKLKEMIPEISEVVQV
L
>Mature_80_residues
STETLSLTNENVEKVLDELRPFLISDGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLKMGIERKLKEMIPEISEVVQVL

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins [H]

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17541876, Length=61, Percent_Identity=44.2622950819672, Blast_Score=63, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322811, Length=75, Percent_Identity=42.6666666666667, Blast_Score=63, Evalue=7e-12,
Organism=Drosophila melanogaster, GI45551492, Length=70, Percent_Identity=41.4285714285714, Blast_Score=63, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24643765, Length=70, Percent_Identity=41.4285714285714, Blast_Score=63, Evalue=4e-11,
Organism=Drosophila melanogaster, GI45556188, Length=70, Percent_Identity=41.4285714285714, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001075
- ProDom:   PD002830 [H]

Pfam domain/function: PF01106 NifU [H]

EC number: NA

Molecular weight: Translated: 8832; Mature: 8701

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTETLSLTNENVEKVLDELRPFLISDGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLK
CCCCEEECCHHHHHHHHHHHCCEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEE
MGIERKLKEMIPEISEVVQVL
CCHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
STETLSLTNENVEKVLDELRPFLISDGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLK
CCCEEECCHHHHHHHHHHHCCEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEE
MGIERKLKEMIPEISEVVQVL
CCHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]