| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78778766
Identifier: 78778766
GI number: 78778766
Start: 362269
End: 364233
Strand: Reverse
Name: 78778766
Synonym: PMT9312_0381
Alternate gene names: NA
Gene position: 364233-362269 (Counterclockwise)
Preceding gene: 78778767
Following gene: 78778765
Centisome position: 21.31
GC content: 41.53
Gene sequence:
>1965_bases GTGTCTGAAGGGGAATTGAAAACGGCAAAGACACAACTGAAATGGATTGGGACACCATCGCTTGGACAGGGTAGATCCAG TGGTGGTAATGCCGCAAGTGAAATTTTTGAAGCAGGTGGGTCACAGAGAAAAAGATCACTGCTGGAAACACTTGTCAGAG AAATCTGTCAGAACAGTCTCGATCAGAGAAAGGATAAAAAGGTGAAAATATTTTTTGATCTGATTGTGCTCAAGGGAGAG AAAAAAGAGAAATTTCTTAAATCAATCAACAGTGAAACTCTTATCCCTCACCTTTCATCAGTGAAAGGTTCAAGTGGAAC TGCCCTCACCCTGAAGGCCGGAGTTGAATCCATGAAATCATCTGATCTGGTGTGTCTGAAAATCAGTGATTACGGAACTG ATGGTCTGACAGGTGATGACTGGGACGAGAAAGGAAATTTCCGTAAGCTCTGTGTGCAGAATTTTTCAACCGGGAAAGAG TCTGGATTAGGAGGAAGCTTTGGGCTGGGGAAGGCAGTCAGCTGGATGCATTCAAGAATATTCACTGTTCTTTTCTCATC AAGAATTGAAGGCAGAAAGAAATTAAGAATTTTTGGAAGAAGCGAAATTCCTGCTCATGAAATGGACGGGAAATCATGGC TTGATGGTGCCTACATGGGATCTGAAAGTGAAAAAGATGGAATTCCTATTGCAGAATCCACCTGGATGAAAGAAAGAGAT GCAGAAAAAATTCTTCTCAATCGTGATAATGAATCTGAGTGCGGAACAACTATCCTCATCCCAACTTTTCATGAACCTGA TCGAGATGATACTGGTTCATCAGGGATAAGAGATCCCGAGGAGCTCTGCAGAGATTTCACAAAAGCTGCATCAAAATGGT TCTGGCCTGCAATCAGCTGGAAAAGACTTGATTTCAAAGCAAGAGTATTTCGAGAAGAGGGTAAATCAGCTGAATATATA TCTGAAGCGCGTGCTGATGAAATATGGTCTCCATTCGTTGAATGCGGGAGAGTCGAACCTTTTGAAGGTGCAAAATCATT ATTCCCAGGCGACAGTTCCTCAATTGATGTTGAGTTTCCCATACCTAGAAGAGTGGAACCCTCAGACAATCCTGAACTTC TTCATGATGAGCTCAAAAGTACTGTCAGAATTGGAGTTACAAGAGTCTCTTCCAAAGAGGAATGTCTGCCATGCCGTTCA ACAATTGCTCTCATAAGGGGTTCTGGAATGGTTATAGATTATGCCGAAGGTACAAAGTTAAGTGATGGAGGTTCCTATTG TGCAGCTGCATTTGTAGGTACATCATTGAACGAGATTGCCGAATCTGACAAGACAGAGTTGAGCAAGGAAAATAACGCAT TCGCTGAAGAATATTTCCGTGCAGGTGAACCAGTGACTCATGATGACTGGCTGCCTACAACAAGAAGACTGAGAGAAAGT TATATATGGAGAGGTCATGCCAGCAGACTTAGAGGAATCAGATATGAACTTAGGCAGATCCTCATTCAGAACTTACTGAC TTCATTTATTGCTCCTCCTGATGAAGGGCCAGAAATGCTTAAAAGAATGATTAATCTTGGCAGAGGAATTAAAGAAAAGA AAAGTCTATCCAAGACACAAAGTTCCGCACTTGAAGTTGTTATAGATAGAGATCAATGCTCCTTTATTAAAAAAGCCAAT GGATGGAGAATAGCTGGCGAATTAGTACGATCAGGTGAATCAAATAGAACTGCAAAAGTACATTTATCTTTCCAGAGCAT TGCAGACAGTGGCCAGGGAGAAATGTGGGGAATAAGTGATATGCGACTTATGGGGAGTGAAAAATATATTTCATATGACG ATTCTGATTCAAGGAGATTTGTATTCTCTGCTGAAAACCAATTTTCATCAGTTCCTTTTGAGTGCATAGTCAAACCTCCA TCAGGAGTAAACCCTGAAATTGCAGGCTTCAGGAAGGTGGGTTAA
Upstream 100 bases:
>100_bases TATGATTAATTTTTCGAATTTGGCTTCTAAATGTTGCAATTCTCTGGCCTTGAGATGACAATCAGATCATGGCATCTATC ATTTATTAACGCTTTATATA
Downstream 100 bases:
>100_bases TTATGCATTTTGTCCCCTGGAAAACAATAGATCTTGATGGAGCATTTCGAATAACAGCTCCAGACAGTATTTCTGAAGAG GTAATTCAGGAAGTAAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 654; Mature: 653
Protein sequence:
>654_residues MSEGELKTAKTQLKWIGTPSLGQGRSSGGNAASEIFEAGGSQRKRSLLETLVREICQNSLDQRKDKKVKIFFDLIVLKGE KKEKFLKSINSETLIPHLSSVKGSSGTALTLKAGVESMKSSDLVCLKISDYGTDGLTGDDWDEKGNFRKLCVQNFSTGKE SGLGGSFGLGKAVSWMHSRIFTVLFSSRIEGRKKLRIFGRSEIPAHEMDGKSWLDGAYMGSESEKDGIPIAESTWMKERD AEKILLNRDNESECGTTILIPTFHEPDRDDTGSSGIRDPEELCRDFTKAASKWFWPAISWKRLDFKARVFREEGKSAEYI SEARADEIWSPFVECGRVEPFEGAKSLFPGDSSSIDVEFPIPRRVEPSDNPELLHDELKSTVRIGVTRVSSKEECLPCRS TIALIRGSGMVIDYAEGTKLSDGGSYCAAAFVGTSLNEIAESDKTELSKENNAFAEEYFRAGEPVTHDDWLPTTRRLRES YIWRGHASRLRGIRYELRQILIQNLLTSFIAPPDEGPEMLKRMINLGRGIKEKKSLSKTQSSALEVVIDRDQCSFIKKAN GWRIAGELVRSGESNRTAKVHLSFQSIADSGQGEMWGISDMRLMGSEKYISYDDSDSRRFVFSAENQFSSVPFECIVKPP SGVNPEIAGFRKVG
Sequences:
>Translated_654_residues MSEGELKTAKTQLKWIGTPSLGQGRSSGGNAASEIFEAGGSQRKRSLLETLVREICQNSLDQRKDKKVKIFFDLIVLKGE KKEKFLKSINSETLIPHLSSVKGSSGTALTLKAGVESMKSSDLVCLKISDYGTDGLTGDDWDEKGNFRKLCVQNFSTGKE SGLGGSFGLGKAVSWMHSRIFTVLFSSRIEGRKKLRIFGRSEIPAHEMDGKSWLDGAYMGSESEKDGIPIAESTWMKERD AEKILLNRDNESECGTTILIPTFHEPDRDDTGSSGIRDPEELCRDFTKAASKWFWPAISWKRLDFKARVFREEGKSAEYI SEARADEIWSPFVECGRVEPFEGAKSLFPGDSSSIDVEFPIPRRVEPSDNPELLHDELKSTVRIGVTRVSSKEECLPCRS TIALIRGSGMVIDYAEGTKLSDGGSYCAAAFVGTSLNEIAESDKTELSKENNAFAEEYFRAGEPVTHDDWLPTTRRLRES YIWRGHASRLRGIRYELRQILIQNLLTSFIAPPDEGPEMLKRMINLGRGIKEKKSLSKTQSSALEVVIDRDQCSFIKKAN GWRIAGELVRSGESNRTAKVHLSFQSIADSGQGEMWGISDMRLMGSEKYISYDDSDSRRFVFSAENQFSSVPFECIVKPP SGVNPEIAGFRKVG >Mature_653_residues SEGELKTAKTQLKWIGTPSLGQGRSSGGNAASEIFEAGGSQRKRSLLETLVREICQNSLDQRKDKKVKIFFDLIVLKGEK KEKFLKSINSETLIPHLSSVKGSSGTALTLKAGVESMKSSDLVCLKISDYGTDGLTGDDWDEKGNFRKLCVQNFSTGKES GLGGSFGLGKAVSWMHSRIFTVLFSSRIEGRKKLRIFGRSEIPAHEMDGKSWLDGAYMGSESEKDGIPIAESTWMKERDA EKILLNRDNESECGTTILIPTFHEPDRDDTGSSGIRDPEELCRDFTKAASKWFWPAISWKRLDFKARVFREEGKSAEYIS EARADEIWSPFVECGRVEPFEGAKSLFPGDSSSIDVEFPIPRRVEPSDNPELLHDELKSTVRIGVTRVSSKEECLPCRST IALIRGSGMVIDYAEGTKLSDGGSYCAAAFVGTSLNEIAESDKTELSKENNAFAEEYFRAGEPVTHDDWLPTTRRLRESY IWRGHASRLRGIRYELRQILIQNLLTSFIAPPDEGPEMLKRMINLGRGIKEKKSLSKTQSSALEVVIDRDQCSFIKKANG WRIAGELVRSGESNRTAKVHLSFQSIADSGQGEMWGISDMRLMGSEKYISYDDSDSRRFVFSAENQFSSVPFECIVKPPS GVNPEIAGFRKVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72825; Mature: 72694
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEGELKTAKTQLKWIGTPSLGQGRSSGGNAASEIFEAGGSQRKRSLLETLVREICQNSL CCCCCCHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH DQRKDKKVKIFFDLIVLKGEKKEKFLKSINSETLIPHLSSVKGSSGTALTLKAGVESMKS HHHCCCEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCHHHCCCCCCCEEEEHHCHHHHCC SDLVCLKISDYGTDGLTGDDWDEKGNFRKLCVQNFSTGKESGLGGSFGLGKAVSWMHSRI CCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH FTVLFSSRIEGRKKLRIFGRSEIPAHEMDGKSWLDGAYMGSESEKDGIPIAESTWMKERD HHHHHHHHCCCCEEEEEECCCCCCCHHCCCCHHCCCHHCCCCCCCCCCCCCHHHHHHHCC AEKILLNRDNESECGTTILIPTFHEPDRDDTGSSGIRDPEELCRDFTKAASKWFWPAISW CCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCH KRLDFKARVFREEGKSAEYISEARADEIWSPFVECGRVEPFEGAKSLFPGDSSSIDVEFP HHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEECC IPRRVEPSDNPELLHDELKSTVRIGVTRVSSKEECLPCRSTIALIRGSGMVIDYAEGTKL CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHCCCCEEEECCCCCEE SDGGSYCAAAFVGTSLNEIAESDKTELSKENNAFAEEYFRAGEPVTHDDWLPTTRRLRES CCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHH YIWRGHASRLRGIRYELRQILIQNLLTSFIAPPDEGPEMLKRMINLGRGIKEKKSLSKTQ HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH SSALEVVIDRDQCSFIKKANGWRIAGELVRSGESNRTAKVHLSFQSIADSGQGEMWGISD HCCEEEEEECHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEEEHHHHHCCCCCCEECCCH MRLMGSEKYISYDDSDSRRFVFSAENQFSSVPFECIVKPPSGVNPEIAGFRKVG HHCCCCCCEEECCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure SEGELKTAKTQLKWIGTPSLGQGRSSGGNAASEIFEAGGSQRKRSLLETLVREICQNSL CCCCCHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH DQRKDKKVKIFFDLIVLKGEKKEKFLKSINSETLIPHLSSVKGSSGTALTLKAGVESMKS HHHCCCEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCHHHCCCCCCCEEEEHHCHHHHCC SDLVCLKISDYGTDGLTGDDWDEKGNFRKLCVQNFSTGKESGLGGSFGLGKAVSWMHSRI CCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH FTVLFSSRIEGRKKLRIFGRSEIPAHEMDGKSWLDGAYMGSESEKDGIPIAESTWMKERD HHHHHHHHCCCCEEEEEECCCCCCCHHCCCCHHCCCHHCCCCCCCCCCCCCHHHHHHHCC AEKILLNRDNESECGTTILIPTFHEPDRDDTGSSGIRDPEELCRDFTKAASKWFWPAISW CCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCH KRLDFKARVFREEGKSAEYISEARADEIWSPFVECGRVEPFEGAKSLFPGDSSSIDVEFP HHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEECC IPRRVEPSDNPELLHDELKSTVRIGVTRVSSKEECLPCRSTIALIRGSGMVIDYAEGTKL CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHCCCCEEEECCCCCEE SDGGSYCAAAFVGTSLNEIAESDKTELSKENNAFAEEYFRAGEPVTHDDWLPTTRRLRES CCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHH YIWRGHASRLRGIRYELRQILIQNLLTSFIAPPDEGPEMLKRMINLGRGIKEKKSLSKTQ HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH SSALEVVIDRDQCSFIKKANGWRIAGELVRSGESNRTAKVHLSFQSIADSGQGEMWGISD HCCEEEEEECHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEEEHHHHHCCCCCCEECCCH MRLMGSEKYISYDDSDSRRFVFSAENQFSSVPFECIVKPPSGVNPEIAGFRKVG HHCCCCCCEEECCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA