Click here to switch to the map view.

The map label for this gene is cpeS [H]

Identifier: 78778693

GI number: 78778693

Start: 294678

End: 295229

Strand: Reverse

Name: cpeS [H]

Synonym: PMT9312_0308

Alternate gene names: 78778693

Gene position: 295229-294678 (Counterclockwise)

Preceding gene: 78778694

Following gene: 78778691

Centisome position: 17.27

GC content: 26.27

Gene sequence:

>552_bases
TTGACGAAGAATCTAACAACAATTAATCAATTCATTGATAAAAGTATAGGAGAGTGGAAATCTATTAGAAGTACTCACAC
TTTAGCTTTTCAGGAATTTGAAAACTCAACTAGTAAAATATACATTAAAAATATCAACTCAAAAAATAAAAAAGTTATTG
AAATTTTTAAAAATTACAACTTAAGTTTAAACCTAGAGAGCATAGCCATTTCTATAAAATGGCAAGCTTTTAGTGATTGG
GAAGAAGATAATATGAGTGAGGGAGATGAAACTATTTTGATATTTTTACCAAAGGATGAGAATTCAGGAATTGTTTTACG
AAATAAAGGTTATACAGAATCCTTTATTTCATCATCCAATTATTTTTTTGATGAACAAAATAATTTAAACATTAAAACTA
TTTACAAATCAAAAGTTTCCGAAGAAAGAATTTCCTTTTTATCCACTCACATAAGATCCAGATTTTCTACTATTAGAAAT
CTGGAAAATAACTCAGTAATACAGACTTCACATACTTCAGAGATAAGGAATTTAGCTAGTTTAAAAGATTAA

Upstream 100 bases:

>100_bases
ACTCCTTCTGGATTAAAAGTAACTTCTGCTAAGAGATTAATGGTGGATTCAATGGTAAGAATGATACAAAAAGCAGAAAA
TCATTCCGTAGAAGATAAAC

Downstream 100 bases:

>100_bases
TTATCCTTTCAAATTGAAACTTTGTTTCAGATACTAATTTAGGAAGAAAGCCTTTGTTTCCTTGCATATTATTAACTGTT
GAATTTAAATCAGAGATTGT

Product: phycoerythrin linker protein CpeS-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MTKNLTTINQFIDKSIGEWKSIRSTHTLAFQEFENSTSKIYIKNINSKNKKVIEIFKNYNLSLNLESIAISIKWQAFSDW
EEDNMSEGDETILIFLPKDENSGIVLRNKGYTESFISSSNYFFDEQNNLNIKTIYKSKVSEERISFLSTHIRSRFSTIRN
LENNSVIQTSHTSEIRNLASLKD

Sequences:

>Translated_183_residues
MTKNLTTINQFIDKSIGEWKSIRSTHTLAFQEFENSTSKIYIKNINSKNKKVIEIFKNYNLSLNLESIAISIKWQAFSDW
EEDNMSEGDETILIFLPKDENSGIVLRNKGYTESFISSSNYFFDEQNNLNIKTIYKSKVSEERISFLSTHIRSRFSTIRN
LENNSVIQTSHTSEIRNLASLKD
>Mature_182_residues
TKNLTTINQFIDKSIGEWKSIRSTHTLAFQEFENSTSKIYIKNINSKNKKVIEIFKNYNLSLNLESIAISIKWQAFSDWE
EDNMSEGDETILIFLPKDENSGIVLRNKGYTESFISSSNYFFDEQNNLNIKTIYKSKVSEERISFLSTHIRSRFSTIRNL
ENNSVIQTSHTSEIRNLASLKD

Specific function: Acts as a chromphore lyase, covalently attaching 3Z- phycoerythrobilin (3Z-PEB) to its target protein CpeB (phycoerythrin). Binds the isomeric chromophores 3E- phycoerythrobilin (3E-PEB), 3Z-PEB as well as their precursor 15,16-dihydrobiliverdin (DHBV) bu

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcS/CpeS biliprotein lyase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR018536 [H]

Pfam domain/function: PF09367 CpeS [H]

EC number: NA

Molecular weight: Translated: 21282; Mature: 21151

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNLTTINQFIDKSIGEWKSIRSTHTLAFQEFENSTSKIYIKNINSKNKKVIEIFKNYN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCC
LSLNLESIAISIKWQAFSDWEEDNMSEGDETILIFLPKDENSGIVLRNKGYTESFISSSN
EEEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCHHHHCCCC
YFFDEQNNLNIKTIYKSKVSEERISFLSTHIRSRFSTIRNLENNSVIQTSHTSEIRNLAS
EEECCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHH
LKD
CCC
>Mature Secondary Structure 
TKNLTTINQFIDKSIGEWKSIRSTHTLAFQEFENSTSKIYIKNINSKNKKVIEIFKNYN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCC
LSLNLESIAISIKWQAFSDWEEDNMSEGDETILIFLPKDENSGIVLRNKGYTESFISSSN
EEEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCHHHHCCCC
YFFDEQNNLNIKTIYKSKVSEERISFLSTHIRSRFSTIRNLENNSVIQTSHTSEIRNLAS
EEECCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHH
LKD
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]