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The map label for this gene is psbJ [H]

Identifier: 78778687

GI number: 78778687

Start: 286796

End: 286993

Strand: Direct

Name: psbJ [H]

Synonym: PMT9312_0302

Alternate gene names: 78778687

Gene position: 286796-286993 (Clockwise)

Preceding gene: 78778686

Following gene: 78778689

Centisome position: 16.78

GC content: 43.43

Gene sequence:

>198_bases
ATGAGTAAATTAAAAGGACCTGATGGAAGAATTCCAGATAGACTTCCCGACGGTAGACCAGCAGTTGCATGGGAAAGAAG
ATGGACTGAAGGAACTCTTCCTCTATGGCTTGTTGCTACAGCAGGTGGAATTGCAGTTATCTTCGTATTAGGAATATTCT
TCTATGGTTCATACCAAGGTGTTGGAGCTGGAGGCTAA

Upstream 100 bases:

>100_bases
TCCAGTTGAACTTAATCGTACAAGCCTTTATTTAGGCTTATTATCAGTCTTTGTATTGGGAATTTTATTTTCCAGTTACT
TTTTCAATTAAATTAAAATC

Downstream 100 bases:

>100_bases
CAAATCCTTACCTTGGACTGATAATCACTTATATCAAATAAGCCTAATAAGAATCAGTAAATATCCTTAGTTTCTCTTTC
GTGGAGCTTGGGATATTTTC

Product: photosystem II reaction center protein J

Products: NA

Alternate protein names: PSII-J [H]

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MSKLKGPDGRIPDRLPDGRPAVAWERRWTEGTLPLWLVATAGGIAVIFVLGIFFYGSYQGVGAGG

Sequences:

>Translated_65_residues
MSKLKGPDGRIPDRLPDGRPAVAWERRWTEGTLPLWLVATAGGIAVIFVLGIFFYGSYQGVGAGG
>Mature_64_residues
SKLKGPDGRIPDRLPDGRPAVAWERRWTEGTLPLWLVATAGGIAVIFVLGIFFYGSYQGVGAGG

Specific function: This protein is a component of the reaction center of photosystem II [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbJ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002682 [H]

Pfam domain/function: PF01788 PsbJ [H]

EC number: NA

Molecular weight: Translated: 6946; Mature: 6815

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLKGPDGRIPDRLPDGRPAVAWERRWTEGTLPLWLVATAGGIAVIFVLGIFFYGSYQG
CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCC
VGAGG
CCCCC
>Mature Secondary Structure 
SKLKGPDGRIPDRLPDGRPAVAWERRWTEGTLPLWLVATAGGIAVIFVLGIFFYGSYQG
CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCC
VGAGG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA