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The map label for this gene is fabI [H]

Identifier: 78778669

GI number: 78778669

Start: 272237

End: 273019

Strand: Reverse

Name: fabI [H]

Synonym: PMT9312_0284

Alternate gene names: 78778669

Gene position: 273019-272237 (Counterclockwise)

Preceding gene: 78778672

Following gene: 78778668

Centisome position: 15.97

GC content: 38.83

Gene sequence:

>783_bases
ATGCTTCTAAATCTAACTGGCAAAAAAATTCTCGTTACAGGAATTGCCAACAATCGTTCAATAGCATGGGGTATAGCTCA
ACAACTTTCAAAAGCTGGCGCAGAACTTGGAATAACATATTTGCCTGACGATAAAGGAAGATTCGAATCTAAAGTCAGAG
AACTAACTGAACCATTAAACCCATCTTTATTTTTGCCTCTTGATGTTCAAAATCCAGCTCAAATAGAAGAAATCTTTGAA
AATATTAAAAACAATTGGGGGGGAATTGACGGTCTAGTTCACTGCTTGGCATTTGCAGGTCGCGACGAATTGATTGGAGA
TTATAGTGCTACCTCATCAGAGGGTTTTGATAGAGCCCTTAATATAAGTGCATATTCATTAGCACCTTTATGTAAAGCAG
CAAAACCACTTTTTAGTGATGGTGCTGGAGTTGTCTCCTTAACTTATTTAGGATCAGAGAGGGCGATTCCTAATTACAAC
GTAATGGGAGTTGCCAAAGCAGCCTTGGAAGCCTCAGTAAGATATCTTTCTGCTGAACTTGGACCCGAAAAACAAGTTAG
AGTCAATGCAATAAGTGCAGGACCAATAAGAACACTTGCAAGTTCTGCTATAGGTGGCATTTTAGATATGATTCACAATG
TTGAAGAAAAAGCTCCTTTACGCAGAACAGTCACTCAAACGGAAGTCGGTAATACTGCTGCTTTTTTATTAAGTGATCTC
TCTAGCGGCATTTCAGGCCAAACAATTTATGTTGATGCGGGTTACTGCATTAATGGAATGTAA

Upstream 100 bases:

>100_bases
AAATTAAATATTTCTTATATTTGAAAATTATTGTATATTTTGCAGTAATCCGTAAAGATAGGTACTTTTGTATAGGAGAA
TAATATAAATAATAAACAAA

Downstream 100 bases:

>100_bases
ACTAAATTTTTTGCATAAAAATGTCATCTCTAAGGCAATCTGAAATAAAAAGAAAAACGAATGAAACAGATATTTCTGTA
TTGATAAACTTAGATGGGAA

Product: enoyl-(acyl carrier protein) reductase

Products: NA

Alternate protein names: NADH-dependent enoyl-ACP reductase [H]

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MLLNLTGKKILVTGIANNRSIAWGIAQQLSKAGAELGITYLPDDKGRFESKVRELTEPLNPSLFLPLDVQNPAQIEEIFE
NIKNNWGGIDGLVHCLAFAGRDELIGDYSATSSEGFDRALNISAYSLAPLCKAAKPLFSDGAGVVSLTYLGSERAIPNYN
VMGVAKAALEASVRYLSAELGPEKQVRVNAISAGPIRTLASSAIGGILDMIHNVEEKAPLRRTVTQTEVGNTAAFLLSDL
SSGISGQTIYVDAGYCINGM

Sequences:

>Translated_260_residues
MLLNLTGKKILVTGIANNRSIAWGIAQQLSKAGAELGITYLPDDKGRFESKVRELTEPLNPSLFLPLDVQNPAQIEEIFE
NIKNNWGGIDGLVHCLAFAGRDELIGDYSATSSEGFDRALNISAYSLAPLCKAAKPLFSDGAGVVSLTYLGSERAIPNYN
VMGVAKAALEASVRYLSAELGPEKQVRVNAISAGPIRTLASSAIGGILDMIHNVEEKAPLRRTVTQTEVGNTAAFLLSDL
SSGISGQTIYVDAGYCINGM
>Mature_260_residues
MLLNLTGKKILVTGIANNRSIAWGIAQQLSKAGAELGITYLPDDKGRFESKVRELTEPLNPSLFLPLDVQNPAQIEEIFE
NIKNNWGGIDGLVHCLAFAGRDELIGDYSATSSEGFDRALNISAYSLAPLCKAAKPLFSDGAGVVSLTYLGSERAIPNYN
VMGVAKAALEASVRYLSAELGPEKQVRVNAISAGPIRTLASSAIGGILDMIHNVEEKAPLRRTVTQTEVGNTAAFLLSDL
SSGISGQTIYVDAGYCINGM

Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]

COG id: COG0623

COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]

Homologues:

Organism=Homo sapiens, GI7705925, Length=260, Percent_Identity=26.9230769230769, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI1787545, Length=257, Percent_Identity=49.8054474708171, Blast_Score=248, Evalue=3e-67,
Organism=Escherichia coli, GI1789378, Length=244, Percent_Identity=25, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI87082100, Length=260, Percent_Identity=28.0769230769231, Blast_Score=69, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24643142, Length=268, Percent_Identity=26.4925373134328, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI28571526, Length=258, Percent_Identity=31.3953488372093, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21357041, Length=258, Percent_Identity=30.2325581395349, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR014358
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.3.1.9 [H]

Molecular weight: Translated: 27646; Mature: 27646

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLNLTGKKILVTGIANNRSIAWGIAQQLSKAGAELGITYLPDDKGRFESKVRELTEPLN
CEEECCCCEEEEEECCCCCEEHHHHHHHHHHCCHHCCEEECCCCCHHHHHHHHHHHCCCC
PSLFLPLDVQNPAQIEEIFENIKNNWGGIDGLVHCLAFAGRDELIGDYSATSSEGFDRAL
CCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCEE
NISAYSLAPLCKAAKPLFSDGAGVVSLTYLGSERAIPNYNVMGVAKAALEASVRYLSAEL
CCCHHHHHHHHHHHCHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GPEKQVRVNAISAGPIRTLASSAIGGILDMIHNVEEKAPLRRTVTQTEVGNTAAFLLSDL
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHH
SSGISGQTIYVDAGYCINGM
HCCCCCCEEEEECCEEECCC
>Mature Secondary Structure
MLLNLTGKKILVTGIANNRSIAWGIAQQLSKAGAELGITYLPDDKGRFESKVRELTEPLN
CEEECCCCEEEEEECCCCCEEHHHHHHHHHHCCHHCCEEECCCCCHHHHHHHHHHHCCCC
PSLFLPLDVQNPAQIEEIFENIKNNWGGIDGLVHCLAFAGRDELIGDYSATSSEGFDRAL
CCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCEE
NISAYSLAPLCKAAKPLFSDGAGVVSLTYLGSERAIPNYNVMGVAKAALEASVRYLSAEL
CCCHHHHHHHHHHHCHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GPEKQVRVNAISAGPIRTLASSAIGGILDMIHNVEEKAPLRRTVTQTEVGNTAAFLLSDL
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHH
SSGISGQTIYVDAGYCINGM
HCCCCCCEEEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8391534; 11759840 [H]