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The map label for this gene is 78778664

Identifier: 78778664

GI number: 78778664

Start: 266521

End: 267939

Strand: Reverse

Name: 78778664

Synonym: PMT9312_0279

Alternate gene names: NA

Gene position: 267939-266521 (Counterclockwise)

Preceding gene: 78778667

Following gene: 78778661

Centisome position: 15.68

GC content: 26.5

Gene sequence:

>1419_bases
TTGAATACTCTTTATTTAAAAAGTTTTATAAGATGCAAAAGAAAGGCTTGGCTAGATTTTAAAGGTAATAAATCTTGTGA
AATTTGGTCTCCGCATAAAGCCATAGATAAAATTAATCAGTATCACATTTTCTCCGAGTTTTGTAATGGTGATATATATA
CAGGATTAAAAGCCTGCAAAAAGGGCTCTCAAGGGGTAATTGGACTTAAAATCAAAAAAAATTTATTCCAAAATCTTAAT
GTAGAGATACAACCCCAATTACTTGTAAAAACTAATGGTAGGAGTAAATGGGGAACATATAAATATCTACCTGCTGTTTA
TAAATTAGGCCACAAAACTACTAAAGAACATTTATTCGACTTAGCTTTTAGTTCGATTATATTAGAAACTTTTCAAGAAT
CTAAAATTGAAAAAGGATTGGTAATTTCAAGTTTTGGTAATAAAGTTAGTATTGAAGAAATTTATTTAAATAAGAAATTA
AGAAAAAAGGTTTTTAATGTTTTACTAAATCTGAATGCATCCTTGGAGGGATTTATTCCAGAGATAACCCAAGATAGAAA
AAAATGTACTATTTGTTCATGGCAAAATTTTTGTAACAAAGAAGCAAAAGAAAATGGATATCTTTCAGATATAGATGGAA
TAGGATCTAAAACTGCCTTATTACTTAAGGCAAATGGGATATCTAATATTCAAGAATTATCTTCATATAACGAAAAAGAA
CTTGGAGATAAGTTATCTAAATTTAAAGATCAAAAGTATGAAAAAGCCTCCAAATTTATAAAGCAAGCACAAGCATATAT
TTCTGGAAAACCATTTTGCATTTCTAATAATAATAATTCTTATGATCTGATAGAAAAAACAAGTTCAGGATTTTATATCT
TTGATATAGAGTCTAATCCAGACGTTAGGCATGACTTTTTATATGGATTTTTAAAAATAAATAATTTATCTACAAAAAAA
GAAGTTCGAATTTATGAACCAATTTTAAATCTCAAAAATAATAAAGAGGAATCTCACAATCAAATTATTAAAATGCTTTT
TTCTAATAAGGAATGGCCAGTTTTACATTACGGAGAGACTGAAAAAATAGCAATAATTAATATTGCTAAAAAATTAAATT
TAAGAATTGAGGAAATTGAGTTTCTTAAATCAAGGTTTATCGACTTACATACCTTAATAAGAAAATCCTGGATATTACCA
ATAAAAAATTATAGCTTAAAAACAGTCTCTAATTGGCTAGGTTTTGAATGGGAACAGAAAGATGTAAACGGATCTAAAGC
CCTTTACTGGTGGATTCAATACCAACTTACCGAAAACGAAGTATTTTTAAAAAAAATTATCAAATATAATAAAGATGATT
GTTTAGCTACACTACATATTGCAAAATTTTTATTCAAAAATCAGTTAAAAAAAAATTAA

Upstream 100 bases:

>100_bases
ATCTAATGTTTCACCTGCCAAATTTAAAAGTTCCTTTATTTGTTTTAATTATCTATATTAATTTATATAAGTAATTTTTA
AAACTAAGCTTCAAAATAAT

Downstream 100 bases:

>100_bases
AGGAAAATTGATCCTACAGATTTATTTATAATAACTTTTCCAAAAATTTCTGAATAAAAATAACTTACCTCTTCTAAATA
TTTCTTTTTTATCATAGCTA

Product: putative nuclease (RecB family)

Products: NA

Alternate protein names: RecB Family-Like Nuclease; Nuclease; Transposase IS; DNA Repair Protein

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MNTLYLKSFIRCKRKAWLDFKGNKSCEIWSPHKAIDKINQYHIFSEFCNGDIYTGLKACKKGSQGVIGLKIKKNLFQNLN
VEIQPQLLVKTNGRSKWGTYKYLPAVYKLGHKTTKEHLFDLAFSSIILETFQESKIEKGLVISSFGNKVSIEEIYLNKKL
RKKVFNVLLNLNASLEGFIPEITQDRKKCTICSWQNFCNKEAKENGYLSDIDGIGSKTALLLKANGISNIQELSSYNEKE
LGDKLSKFKDQKYEKASKFIKQAQAYISGKPFCISNNNNSYDLIEKTSSGFYIFDIESNPDVRHDFLYGFLKINNLSTKK
EVRIYEPILNLKNNKEESHNQIIKMLFSNKEWPVLHYGETEKIAIINIAKKLNLRIEEIEFLKSRFIDLHTLIRKSWILP
IKNYSLKTVSNWLGFEWEQKDVNGSKALYWWIQYQLTENEVFLKKIIKYNKDDCLATLHIAKFLFKNQLKKN

Sequences:

>Translated_472_residues
MNTLYLKSFIRCKRKAWLDFKGNKSCEIWSPHKAIDKINQYHIFSEFCNGDIYTGLKACKKGSQGVIGLKIKKNLFQNLN
VEIQPQLLVKTNGRSKWGTYKYLPAVYKLGHKTTKEHLFDLAFSSIILETFQESKIEKGLVISSFGNKVSIEEIYLNKKL
RKKVFNVLLNLNASLEGFIPEITQDRKKCTICSWQNFCNKEAKENGYLSDIDGIGSKTALLLKANGISNIQELSSYNEKE
LGDKLSKFKDQKYEKASKFIKQAQAYISGKPFCISNNNNSYDLIEKTSSGFYIFDIESNPDVRHDFLYGFLKINNLSTKK
EVRIYEPILNLKNNKEESHNQIIKMLFSNKEWPVLHYGETEKIAIINIAKKLNLRIEEIEFLKSRFIDLHTLIRKSWILP
IKNYSLKTVSNWLGFEWEQKDVNGSKALYWWIQYQLTENEVFLKKIIKYNKDDCLATLHIAKFLFKNQLKKN
>Mature_472_residues
MNTLYLKSFIRCKRKAWLDFKGNKSCEIWSPHKAIDKINQYHIFSEFCNGDIYTGLKACKKGSQGVIGLKIKKNLFQNLN
VEIQPQLLVKTNGRSKWGTYKYLPAVYKLGHKTTKEHLFDLAFSSIILETFQESKIEKGLVISSFGNKVSIEEIYLNKKL
RKKVFNVLLNLNASLEGFIPEITQDRKKCTICSWQNFCNKEAKENGYLSDIDGIGSKTALLLKANGISNIQELSSYNEKE
LGDKLSKFKDQKYEKASKFIKQAQAYISGKPFCISNNNNSYDLIEKTSSGFYIFDIESNPDVRHDFLYGFLKINNLSTKK
EVRIYEPILNLKNNKEESHNQIIKMLFSNKEWPVLHYGETEKIAIINIAKKLNLRIEEIEFLKSRFIDLHTLIRKSWILP
IKNYSLKTVSNWLGFEWEQKDVNGSKALYWWIQYQLTENEVFLKKIIKYNKDDCLATLHIAKFLFKNQLKKN

Specific function: Unknown

COG id: COG2251

COG function: function code R; Predicted nuclease (RecB family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55015; Mature: 55015

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLYLKSFIRCKRKAWLDFKGNKSCEIWSPHKAIDKINQYHIFSEFCNGDIYTGLKACK
CCCHHHHHHHHHHHHHCEECCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
KGSQGVIGLKIKKNLFQNLNVEIQPQLLVKTNGRSKWGTYKYLPAVYKLGHKTTKEHLFD
CCCCCEEEEEEEHHHHHCCCEEECCEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHH
LAFSSIILETFQESKIEKGLVISSFGNKVSIEEIYLNKKLRKKVFNVLLNLNASLEGFIP
HHHHHHHHHHHHHHHHHCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EITQDRKKCTICSWQNFCNKEAKENGYLSDIDGIGSKTALLLKANGISNIQELSSYNEKE
HHHCCCHHEEEECHHHHHCHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHCCCHHH
LGDKLSKFKDQKYEKASKFIKQAQAYISGKPFCISNNNNSYDLIEKTSSGFYIFDIESNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCEEEEEECCCC
DVRHDFLYGFLKINNLSTKKEVRIYEPILNLKNNKEESHNQIIKMLFSNKEWPVLHYGET
CCCHHHEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEECCCC
EKIAIINIAKKLNLRIEEIEFLKSRFIDLHTLIRKSWILPIKNYSLKTVSNWLGFEWEQK
CCEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHCCCEECC
DVNGSKALYWWIQYQLTENEVFLKKIIKYNKDDCLATLHIAKFLFKNQLKKN
CCCCCEEEEEEEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTLYLKSFIRCKRKAWLDFKGNKSCEIWSPHKAIDKINQYHIFSEFCNGDIYTGLKACK
CCCHHHHHHHHHHHHHCEECCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
KGSQGVIGLKIKKNLFQNLNVEIQPQLLVKTNGRSKWGTYKYLPAVYKLGHKTTKEHLFD
CCCCCEEEEEEEHHHHHCCCEEECCEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHH
LAFSSIILETFQESKIEKGLVISSFGNKVSIEEIYLNKKLRKKVFNVLLNLNASLEGFIP
HHHHHHHHHHHHHHHHHCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EITQDRKKCTICSWQNFCNKEAKENGYLSDIDGIGSKTALLLKANGISNIQELSSYNEKE
HHHCCCHHEEEECHHHHHCHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHCCCHHH
LGDKLSKFKDQKYEKASKFIKQAQAYISGKPFCISNNNNSYDLIEKTSSGFYIFDIESNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCEEEEEECCCC
DVRHDFLYGFLKINNLSTKKEVRIYEPILNLKNNKEESHNQIIKMLFSNKEWPVLHYGET
CCCHHHEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEECCCC
EKIAIINIAKKLNLRIEEIEFLKSRFIDLHTLIRKSWILPIKNYSLKTVSNWLGFEWEQK
CCEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHCCCEECC
DVNGSKALYWWIQYQLTENEVFLKKIIKYNKDDCLATLHIAKFLFKNQLKKN
CCCCCEEEEEEEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA