| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78778654
Identifier: 78778654
GI number: 78778654
Start: 258056
End: 258673
Strand: Direct
Name: 78778654
Synonym: PMT9312_0269
Alternate gene names: NA
Gene position: 258056-258673 (Clockwise)
Preceding gene: 78778652
Following gene: 78778656
Centisome position: 15.1
GC content: 33.5
Gene sequence:
>618_bases ATGAAATACGATATCCATCATGAATTTGTCTCGATTAGCTCTCAAACTGCAACTCATAGAATTATTTTGATACATGGTTG GGGAGCCGATTCAGATGACCTTTTAATATTTGGAAAGGAGATGACAGATAAAATAAATCTTGATTTTGAGGTAATTTCTT TGAGGGCTCCTGGAGTTCATCCAAGTGGTCAGGGAAGACAGTGGTATGGATTGTACCCACATGATTGGAATGGAGCTGAA GTTGAAGTAAATCAACTTTTATGTACATTAAAAAAATTTGATACTGATCAGATTTCACTAAGAGAAACAATTTTGTTGGG CTTCTCTCAGGGGGCGGCAATGGCAATTGATGCAGGATTCAAATTAAATTTTGGATTGATTGTTGCTTGTAGTGGTTATC CTCATCCAAACTGGGTTCCTGGAGAAAAATGCCCACCATTGATTATTAGTCATGGTTTATTTGATGATGTCGTGCCTATA GATGCTTCTCGGATTATTTATGAAAAGGTAAAAAGTAAGTCTTCTAAATTTTGCGAATTATTAGAATTCGATGGATTCCA TCAAATTGATTCAAATTTAATTAATTTTATAAGTTCAAATATAAATAATATTTTTTAA
Upstream 100 bases:
>100_bases CCAATTCCATACAAAATGGGACTATATGTTTTTTATCTGAGACACTTACTAAAGCTAATGGTGACATTATGAGAAAGTTT ATTTACTTAAGAATATAAAC
Downstream 100 bases:
>100_bases ACAAAAGCATATTCGTATTCTTCAATTTCTTCCCAATCATCTGCAGTAAGTTCTAGACCCTCAAATATTTTTTCTTCACC AATTCCTTCAACTACGAATT
Product: putative esterase
Products: NA
Alternate protein names: Phospholipase/Carboxylesterase; Serine Esterase; Phospholipase/Carboxylesterase Superfamily
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MKYDIHHEFVSISSQTATHRIILIHGWGADSDDLLIFGKEMTDKINLDFEVISLRAPGVHPSGQGRQWYGLYPHDWNGAE VEVNQLLCTLKKFDTDQISLRETILLGFSQGAAMAIDAGFKLNFGLIVACSGYPHPNWVPGEKCPPLIISHGLFDDVVPI DASRIIYEKVKSKSSKFCELLEFDGFHQIDSNLINFISSNINNIF
Sequences:
>Translated_205_residues MKYDIHHEFVSISSQTATHRIILIHGWGADSDDLLIFGKEMTDKINLDFEVISLRAPGVHPSGQGRQWYGLYPHDWNGAE VEVNQLLCTLKKFDTDQISLRETILLGFSQGAAMAIDAGFKLNFGLIVACSGYPHPNWVPGEKCPPLIISHGLFDDVVPI DASRIIYEKVKSKSSKFCELLEFDGFHQIDSNLINFISSNINNIF >Mature_205_residues MKYDIHHEFVSISSQTATHRIILIHGWGADSDDLLIFGKEMTDKINLDFEVISLRAPGVHPSGQGRQWYGLYPHDWNGAE VEVNQLLCTLKKFDTDQISLRETILLGFSQGAAMAIDAGFKLNFGLIVACSGYPHPNWVPGEKCPPLIISHGLFDDVVPI DASRIIYEKVKSKSSKFCELLEFDGFHQIDSNLINFISSNINNIF
Specific function: Unknown
COG id: COG0400
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22994; Mature: 22994
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYDIHHEFVSISSQTATHRIILIHGWGADSDDLLIFGKEMTDKINLDFEVISLRAPGVH CCCCCCHHEEECCCCCCEEEEEEEECCCCCCCCEEEECCCCCCEECCCEEEEEEECCCCC PSGQGRQWYGLYPHDWNGAEVEVNQLLCTLKKFDTDQISLRETILLGFSQGAAMAIDAGF CCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHCCCCCEEEEEEEEEEECCCCEEEEECCC KLNFGLIVACSGYPHPNWVPGEKCPPLIISHGLFDDVVPIDASRIIYEKVKSKSSKFCEL EECCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHH LEFDGFHQIDSNLINFISSNINNIF HHCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKYDIHHEFVSISSQTATHRIILIHGWGADSDDLLIFGKEMTDKINLDFEVISLRAPGVH CCCCCCHHEEECCCCCCEEEEEEEECCCCCCCCEEEECCCCCCEECCCEEEEEEECCCCC PSGQGRQWYGLYPHDWNGAEVEVNQLLCTLKKFDTDQISLRETILLGFSQGAAMAIDAGF CCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHCCCCCEEEEEEEEEEECCCCEEEEECCC KLNFGLIVACSGYPHPNWVPGEKCPPLIISHGLFDDVVPIDASRIIYEKVKSKSSKFCEL EECCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHH LEFDGFHQIDSNLINFISSNINNIF HHCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA