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The map label for this gene is yvdB [H]

Identifier: 78778602

GI number: 78778602

Start: 207820

End: 209472

Strand: Reverse

Name: yvdB [H]

Synonym: PMT9312_0216

Alternate gene names: 78778602

Gene position: 209472-207820 (Counterclockwise)

Preceding gene: 78778608

Following gene: 78778601

Centisome position: 12.26

GC content: 39.02

Gene sequence:

>1653_bases
TTGCAAATAATTAATGGATTTCATCTAAAGAATGTAAGAGGCGATATTCTTGGAGGGATCACAGCCGCAGTGGTGGCTTT
ACCTCTCGCTCTCGCCTTTGGTAATGCTGCGTTAGGACCTGGGGGAGCAATTTATGGACTATATGGGGCGGTAGTAGTTG
GGTTTTTAGCAGCATTATTCGGAGGAACACCTGCTCAAGTTAGTGGGCCTACCGGTCCCATGAGTGTAACTGTTGCTGGT
GTAGTAGCAGGCTTAGCAGCAGTAGGAGTCCCAAGAGATCTATCTGCAGGACAAATTTTACCTTTAGTGATGGCAGCGGT
AGTAATTGGTGGGTTATTGCAAATATTATTTGGGATTCTAAAACTAGGTAAATACATTACTTTAGTTCCATATTCTGTTG
TTTCAGGATTTATGTCTGGTATTGGAGTAATAATCATTGCACTTCAGATTGGGCCGTTACTAGGAATTAGCACTCGTGGT
GGAGTAGTCGAATCTTTATCTACTGTTTTTTCAAATTTCCAGCCCAACGGGGCTGCTATTGGAGTAGCGATAATGACACT
AGGTATAGTATTTCTAACTCCTAGAAAAATAAGTCAATGGGTTCCTTCTCCTCTCTTGGCCCTATTAATAGTAACTCCAA
TATCAATATTGATTTTTGGAGATGGGGCTATTGATAGAATTGGAGAAATTCCAAGAGGAGTTCCATCTTTAAATTTTCCA
AGTTTTAATCAATATTTTCCAATTATTTTCAAGGCAGGATTAGTCCTCGCAGTACTTGGCGCAATTGACTCTTTACTGAC
ATCTCTAGTAGCAGACAATATCTCTCAAACAAAACATAATTCTGATAGAGAACTGATTGGTCAAGGAATAGGAAATGCTG
TTGCAGGTCTGTTTTCAGGTTTACCTGGAGCAGGAGCAACAATGAGAACAGTTATAAATGTTAAATCTGGAGGCTCAACT
CCCATTTCTGGTATGGTTCACTCAGTTGTGTTGTTGATAGTTTTAGTTGGTGCAGGGCCTTTAGCTGAGCAAATACCCAC
TGCTTTGCTAGCAGGAATTCTTATCAAAGTAGGTCTAGATATTATTGATTGGGGATTCTTAAGGAGGGCTCACAAATTAT
CTTTAAAAACTTCAGTAGTAATGTACGGCGTACTTCTAATGACTGTTTTTTGGGATTTAATTTGGGCAGTTTTAGTCGGT
GTATTCATAGCAAATATGCTCACTATTGATTCAATCACCGAAACTCAACTAGAAGGCATGGATGAGGATAATCCTTTATC
AAAAGATGATCAAGCTAAAAATGCATTACCTGCTGATGAGAAAGCACTACTAGATAGATGTTCAGGAGAAGTAATGCTAT
TTAGACTAAAAGGGCCACTTAGTTTTGGAGCAGCTAAAGGTATATCTGAGAGAATGATGCTTGTAAGAAACTACAAGATT
TTGATATTAGATATTACTGATGTACCAAGACTTGGAGTGACAGCGACTCTCGCAATAGAGGATATGATGCAAGAAGCAAA
AAATAATTCCAGAAAAGCATTTGTTGCTGGGGCCAATCAAAAAGTAAAGGATAGATTAGCTAAGTTTGGAGTTGAAGGCA
TCATTGAAACAAGGAAAGAAGCATTAGAAACCGCTCTAAATGAACTTGGCTAG

Upstream 100 bases:

>100_bases
AAAAGTTAAAAAATATTTTGCAGAAACTTAATTTCTTACAAATTTACATCATAAAGAGATAATATCTTTTAGTTAAGTAT
TTATTTTAAGGAGAGTACCT

Downstream 100 bases:

>100_bases
TAATTTATGGAAATAAATACAATTCTGCAAAATGTATTAGCCCCCCCAGTTCTTTTCTTTTTGATTGGAGCAATATCAGT
ACTGTTTAAATCTGATTTGG

Product: putative sulfate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MQIINGFHLKNVRGDILGGITAAVVALPLALAFGNAALGPGGAIYGLYGAVVVGFLAALFGGTPAQVSGPTGPMSVTVAG
VVAGLAAVGVPRDLSAGQILPLVMAAVVIGGLLQILFGILKLGKYITLVPYSVVSGFMSGIGVIIIALQIGPLLGISTRG
GVVESLSTVFSNFQPNGAAIGVAIMTLGIVFLTPRKISQWVPSPLLALLIVTPISILIFGDGAIDRIGEIPRGVPSLNFP
SFNQYFPIIFKAGLVLAVLGAIDSLLTSLVADNISQTKHNSDRELIGQGIGNAVAGLFSGLPGAGATMRTVINVKSGGST
PISGMVHSVVLLIVLVGAGPLAEQIPTALLAGILIKVGLDIIDWGFLRRAHKLSLKTSVVMYGVLLMTVFWDLIWAVLVG
VFIANMLTIDSITETQLEGMDEDNPLSKDDQAKNALPADEKALLDRCSGEVMLFRLKGPLSFGAAKGISERMMLVRNYKI
LILDITDVPRLGVTATLAIEDMMQEAKNNSRKAFVAGANQKVKDRLAKFGVEGIIETRKEALETALNELG

Sequences:

>Translated_550_residues
MQIINGFHLKNVRGDILGGITAAVVALPLALAFGNAALGPGGAIYGLYGAVVVGFLAALFGGTPAQVSGPTGPMSVTVAG
VVAGLAAVGVPRDLSAGQILPLVMAAVVIGGLLQILFGILKLGKYITLVPYSVVSGFMSGIGVIIIALQIGPLLGISTRG
GVVESLSTVFSNFQPNGAAIGVAIMTLGIVFLTPRKISQWVPSPLLALLIVTPISILIFGDGAIDRIGEIPRGVPSLNFP
SFNQYFPIIFKAGLVLAVLGAIDSLLTSLVADNISQTKHNSDRELIGQGIGNAVAGLFSGLPGAGATMRTVINVKSGGST
PISGMVHSVVLLIVLVGAGPLAEQIPTALLAGILIKVGLDIIDWGFLRRAHKLSLKTSVVMYGVLLMTVFWDLIWAVLVG
VFIANMLTIDSITETQLEGMDEDNPLSKDDQAKNALPADEKALLDRCSGEVMLFRLKGPLSFGAAKGISERMMLVRNYKI
LILDITDVPRLGVTATLAIEDMMQEAKNNSRKAFVAGANQKVKDRLAKFGVEGIIETRKEALETALNELG
>Mature_550_residues
MQIINGFHLKNVRGDILGGITAAVVALPLALAFGNAALGPGGAIYGLYGAVVVGFLAALFGGTPAQVSGPTGPMSVTVAG
VVAGLAAVGVPRDLSAGQILPLVMAAVVIGGLLQILFGILKLGKYITLVPYSVVSGFMSGIGVIIIALQIGPLLGISTRG
GVVESLSTVFSNFQPNGAAIGVAIMTLGIVFLTPRKISQWVPSPLLALLIVTPISILIFGDGAIDRIGEIPRGVPSLNFP
SFNQYFPIIFKAGLVLAVLGAIDSLLTSLVADNISQTKHNSDRELIGQGIGNAVAGLFSGLPGAGATMRTVINVKSGGST
PISGMVHSVVLLIVLVGAGPLAEQIPTALLAGILIKVGLDIIDWGFLRRAHKLSLKTSVVMYGVLLMTVFWDLIWAVLVG
VFIANMLTIDSITETQLEGMDEDNPLSKDDQAKNALPADEKALLDRCSGEVMLFRLKGPLSFGAAKGISERMMLVRNYKI
LILDITDVPRLGVTATLAIEDMMQEAKNNSRKAFVAGANQKVKDRLAKFGVEGIIETRKEALETALNELG

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI39752683, Length=442, Percent_Identity=24.6606334841629, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI45827800, Length=442, Percent_Identity=24.6606334841629, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI45827802, Length=441, Percent_Identity=24.2630385487528, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI20336282, Length=501, Percent_Identity=23.5528942115768, Blast_Score=83, Evalue=9e-16,
Organism=Homo sapiens, GI16306483, Length=503, Percent_Identity=24.4532803180915, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI269784651, Length=389, Percent_Identity=23.6503856041131, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI4557535, Length=561, Percent_Identity=24.0641711229947, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI94721255, Length=364, Percent_Identity=25.8241758241758, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI94721253, Length=364, Percent_Identity=25.8241758241758, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI94721259, Length=364, Percent_Identity=25.8241758241758, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI4505697, Length=377, Percent_Identity=23.342175066313, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI94721257, Length=364, Percent_Identity=25.8241758241758, Blast_Score=76, Evalue=9e-14,
Organism=Homo sapiens, GI262206105, Length=300, Percent_Identity=22.3333333333333, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI262206075, Length=300, Percent_Identity=22.3333333333333, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI262206069, Length=300, Percent_Identity=22.3333333333333, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI262206063, Length=300, Percent_Identity=22.3333333333333, Blast_Score=69, Evalue=2e-11,
Organism=Escherichia coli, GI87081859, Length=439, Percent_Identity=31.2072892938497, Blast_Score=145, Evalue=6e-36,
Organism=Caenorhabditis elegans, GI17551690, Length=377, Percent_Identity=23.6074270557029, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17566848, Length=558, Percent_Identity=23.2974910394265, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI86565215, Length=448, Percent_Identity=24.3303571428571, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI193203292, Length=543, Percent_Identity=22.4677716390424, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI86564196, Length=442, Percent_Identity=25.7918552036199, Blast_Score=84, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI86564876, Length=387, Percent_Identity=23.5142118863049, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17562578, Length=375, Percent_Identity=25.3333333333333, Blast_Score=74, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6325260, Length=600, Percent_Identity=22.6666666666667, Blast_Score=104, Evalue=3e-23,
Organism=Drosophila melanogaster, GI21355087, Length=391, Percent_Identity=23.7851662404092, Blast_Score=102, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24647160, Length=391, Percent_Identity=23.7851662404092, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI85815873, Length=427, Percent_Identity=26.463700234192, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24649801, Length=440, Percent_Identity=26.3636363636364, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24666186, Length=423, Percent_Identity=26.0047281323877, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24651449, Length=401, Percent_Identity=25.1870324189526, Blast_Score=79, Evalue=8e-15,
Organism=Drosophila melanogaster, GI21358633, Length=430, Percent_Identity=22.3255813953488, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24663084, Length=422, Percent_Identity=22.9857819905213, Blast_Score=66, Evalue=7e-11,
Organism=Drosophila melanogaster, GI21357695, Length=422, Percent_Identity=22.9857819905213, Blast_Score=66, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 57341; Mature: 57341

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]