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The map label for this gene is 78778601

Identifier: 78778601

GI number: 78778601

Start: 206815

End: 207813

Strand: Reverse

Name: 78778601

Synonym: PMT9312_0215

Alternate gene names: NA

Gene position: 207813-206815 (Counterclockwise)

Preceding gene: 78778602

Following gene: 78778600

Centisome position: 12.16

GC content: 34.53

Gene sequence:

>999_bases
ATGGAAATAAATACAATTCTGCAAAATGTATTAGCCCCCCCAGTTCTTTTCTTTTTGATTGGAGCAATATCAGTACTGTT
TAAATCTGATTTGGAAATTCCAGCTCCATTACCTAAACTCTTTTCCTTATATCTGCTCTTAGCTATTGGTTTTAAAGGAG
GTATAGAGATTCAGAAAAGTGGGTTTACTGATCAAGTATTGCCGACTCTAAGTGCTGCAATACTAATGTCGCTAATAATT
CCGCTGATTGGATTTTTAATTTTAAGATTTAAGTTTGATGTCTTTAATTCAGCAGCAATAGCAGCAGCATACGGTTCAAT
TAGTGCTGTTACATTTATTTCCGCAGAAAGTTTCTTAGAAAGTCAAAAAATAGCTTTTGATGGGTTTATGGTTGGCGCCT
TAGCTTTAATGGAATCTCCGGCAATAATTGTTGGATTATTACTTGTAAAATTTGCAGCTCCCAAAAATAGACCAAAATCA
AGAAAAATGCATTTAAGCGCAATATTACATGAATCATTTTTGAATGGATCAGTGTATTTATTGCTTTCAAGCTTAATTGT
GGGATTTCTGACTGCTTCCAGTAATCCCTCAGGGATTACAAAAATGGAGCCATTTACTGGACAATTATTCTATGGTGCAG
AATGCTTCTTCTTGTTAGATATGGGAATAGTAGCTGCTCAAAGATTACCGAGACTGAAAAATGCAGGTTCTTTCTTGATT
GGCTTTGCAATTTTCATGCCTCTATTTAATGCATTCATAGGAGTTTTGGTTGCAAGATTTTTATCTTTAGAACCTGGCAA
CGCACTTTTATTTGTGGTTTTATGTGCAAGCGCCTCATATTTAGCAGTTCCTGCAGCTATGAGGATGACAGTTCCAGAAG
CTAAATCTAGTTATTATATTTCAACAACATTAGGTTTAACTTTCCCATTTAATATAGTTCTTGGCATTCCCATATATATG
AGTTTAGTAAATACCATTATCCCACTTTCTCCTTTATAA

Upstream 100 bases:

>100_bases
AAAAGTAAAGGATAGATTAGCTAAGTTTGGAGTTGAAGGCATCATTGAAACAAGGAAAGAAGCATTAGAAACCGCTCTAA
ATGAACTTGGCTAGTAATTT

Downstream 100 bases:

>100_bases
AGATGAAAAGATTAGACTTAATATTTAGTGAAAGAGAACTAGATGCAATCATTAAAACATTAGAAAAAGCTAATGTTCCT
GGATATACAGTTATGAAACA

Product: putative sodium-dependent bicarbonate transporter

Products: NA

Alternate protein names: Sodium-Dependent Bicarbonate Transporter; Sodium Bicarbonate Cotransporter; Conserved Domain Protein; SBT Type Permease Sodium-Bicarbonate; Membrane Permease; Permease-Like Protein; Domain Transmembrane Protein

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MEINTILQNVLAPPVLFFLIGAISVLFKSDLEIPAPLPKLFSLYLLLAIGFKGGIEIQKSGFTDQVLPTLSAAILMSLII
PLIGFLILRFKFDVFNSAAIAAAYGSISAVTFISAESFLESQKIAFDGFMVGALALMESPAIIVGLLLVKFAAPKNRPKS
RKMHLSAILHESFLNGSVYLLLSSLIVGFLTASSNPSGITKMEPFTGQLFYGAECFFLLDMGIVAAQRLPRLKNAGSFLI
GFAIFMPLFNAFIGVLVARFLSLEPGNALLFVVLCASASYLAVPAAMRMTVPEAKSSYYISTTLGLTFPFNIVLGIPIYM
SLVNTIIPLSPL

Sequences:

>Translated_332_residues
MEINTILQNVLAPPVLFFLIGAISVLFKSDLEIPAPLPKLFSLYLLLAIGFKGGIEIQKSGFTDQVLPTLSAAILMSLII
PLIGFLILRFKFDVFNSAAIAAAYGSISAVTFISAESFLESQKIAFDGFMVGALALMESPAIIVGLLLVKFAAPKNRPKS
RKMHLSAILHESFLNGSVYLLLSSLIVGFLTASSNPSGITKMEPFTGQLFYGAECFFLLDMGIVAAQRLPRLKNAGSFLI
GFAIFMPLFNAFIGVLVARFLSLEPGNALLFVVLCASASYLAVPAAMRMTVPEAKSSYYISTTLGLTFPFNIVLGIPIYM
SLVNTIIPLSPL
>Mature_332_residues
MEINTILQNVLAPPVLFFLIGAISVLFKSDLEIPAPLPKLFSLYLLLAIGFKGGIEIQKSGFTDQVLPTLSAAILMSLII
PLIGFLILRFKFDVFNSAAIAAAYGSISAVTFISAESFLESQKIAFDGFMVGALALMESPAIIVGLLLVKFAAPKNRPKS
RKMHLSAILHESFLNGSVYLLLSSLIVGFLTASSNPSGITKMEPFTGQLFYGAECFFLLDMGIVAAQRLPRLKNAGSFLI
GFAIFMPLFNAFIGVLVARFLSLEPGNALLFVVLCASASYLAVPAAMRMTVPEAKSSYYISTTLGLTFPFNIVLGIPIYM
SLVNTIIPLSPL

Specific function: Unknown

COG id: COG3329

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35738; Mature: 35738

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEINTILQNVLAPPVLFFLIGAISVLFKSDLEIPAPLPKLFSLYLLLAIGFKGGIEIQKS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECC
GFTDQVLPTLSAAILMSLIIPLIGFLILRFKFDVFNSAAIAAAYGSISAVTFISAESFLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHH
SQKIAFDGFMVGALALMESPAIIVGLLLVKFAAPKNRPKSRKMHLSAILHESFLNGSVYL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHH
LLSSLIVGFLTASSNPSGITKMEPFTGQLFYGAECFFLLDMGIVAAQRLPRLKNAGSFLI
HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHCCCHHHH
GFAIFMPLFNAFIGVLVARFLSLEPGNALLFVVLCASASYLAVPAAMRMTVPEAKSSYYI
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHEECCCCCCCEEE
STTLGLTFPFNIVLGIPIYMSLVNTIIPLSPL
EEEECCEEHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEINTILQNVLAPPVLFFLIGAISVLFKSDLEIPAPLPKLFSLYLLLAIGFKGGIEIQKS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECC
GFTDQVLPTLSAAILMSLIIPLIGFLILRFKFDVFNSAAIAAAYGSISAVTFISAESFLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHH
SQKIAFDGFMVGALALMESPAIIVGLLLVKFAAPKNRPKSRKMHLSAILHESFLNGSVYL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHH
LLSSLIVGFLTASSNPSGITKMEPFTGQLFYGAECFFLLDMGIVAAQRLPRLKNAGSFLI
HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHCCCHHHH
GFAIFMPLFNAFIGVLVARFLSLEPGNALLFVVLCASASYLAVPAAMRMTVPEAKSSYYI
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHEECCCCCCCEEE
STTLGLTFPFNIVLGIPIYMSLVNTIIPLSPL
EEEECCEEHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA