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The map label for this gene is ndhE [H]

Identifier: 78778545

GI number: 78778545

Start: 154039

End: 154362

Strand: Reverse

Name: ndhE [H]

Synonym: PMT9312_0159

Alternate gene names: 78778545

Gene position: 154362-154039 (Counterclockwise)

Preceding gene: 78778546

Following gene: 78778544

Centisome position: 9.03

GC content: 29.94

Gene sequence:

>324_bases
ATGATGAATTTAGAATCAATTCCTATTCAAGCCTTTTTGATAGTATCTTCAGTACTATTTTGTATTGGTATTTGGGGATT
ATTAAATAGCAGAAATGCAGTTAGAGTTCTAATGAGTATTGAATTAATGCTCAATGCGGTAAATATAAACTTGATGGCTT
TTTCTTCTTATATTGATAATAATGTAATTCAAGGACAAGTTTTTACAATTTTTGTAATTACTGTTGCAGCTGCAGAAGCA
GCCGTTGGCTTAGCTATACTGCTATCGCTTTACAGAAATAGGGTTACTGTAGATATGGAAAGTTTTAATTTATTAAAATG
GTAA

Upstream 100 bases:

>100_bases
GAACAAAGATATTTCAACTGGATTACCTGTTGATCAAGAGTTAATTGAAAAATCATCAGAACCATTACTTACTAATAAAA
ATTAATCTTTCACTTTTTTT

Downstream 100 bases:

>100_bases
AAGCATTAAATGAAACTTTCATTAGTGCTTATTATATATCGTTCAGATAGTTCTATCGCTTTAGAGGCTTCTAAATTCTG
TGAAGAGGTCCTCAAAGCAA

Product: NADH dehydrogenase subunit K

Products: NAD+; ubiquinol

Alternate protein names: NAD(P)H dehydrogenase subunit 4L; NADH-plastoquinone oxidoreductase subunit 4L; NDH-1, subunit 4L; NDH-E [H]

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MMNLESIPIQAFLIVSSVLFCIGIWGLLNSRNAVRVLMSIELMLNAVNINLMAFSSYIDNNVIQGQVFTIFVITVAAAEA
AVGLAILLSLYRNRVTVDMESFNLLKW

Sequences:

>Translated_107_residues
MMNLESIPIQAFLIVSSVLFCIGIWGLLNSRNAVRVLMSIELMLNAVNINLMAFSSYIDNNVIQGQVFTIFVITVAAAEA
AVGLAILLSLYRNRVTVDMESFNLLKW
>Mature_107_residues
MMNLESIPIQAFLIVSSVLFCIGIWGLLNSRNAVRVLMSIELMLNAVNINLMAFSSYIDNNVIQGQVFTIFVITVAAAEA
AVGLAILLSLYRNRVTVDMESFNLLKW

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: COG0713

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 4L family [H]

Homologues:

Organism=Escherichia coli, GI1788615, Length=100, Percent_Identity=38, Blast_Score=70, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001133 [H]

Pfam domain/function: PF00420 Oxidored_q2 [H]

EC number: 1.6.5.3

Molecular weight: Translated: 11883; Mature: 11883

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNLESIPIQAFLIVSSVLFCIGIWGLLNSRNAVRVLMSIELMLNAVNINLMAFSSYIDN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEEEHHHHCC
NVIQGQVFTIFVITVAAAEAAVGLAILLSLYRNRVTVDMESFNLLKW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCC
>Mature Secondary Structure
MMNLESIPIQAFLIVSSVLFCIGIWGLLNSRNAVRVLMSIELMLNAVNINLMAFSSYIDN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEEEHHHHCC
NVIQGQVFTIFVITVAAAEAAVGLAILLSLYRNRVTVDMESFNLLKW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA