Click here to switch to the map view.

The map label for this gene is 78778506

Identifier: 78778506

GI number: 78778506

Start: 118477

End: 118905

Strand: Direct

Name: 78778506

Synonym: PMT9312_0120

Alternate gene names: NA

Gene position: 118477-118905 (Clockwise)

Preceding gene: 78778505

Following gene: 78778507

Centisome position: 6.93

GC content: 32.87

Gene sequence:

>429_bases
ATGAATAACGAAATTAATCCCATCGAAGAGGATTTTAATGCAGCTCTATCAAAGTATAAAGATGGGCAAGATTTAATTCC
TATCGTTCAAGATTTTCAAAAAATTATACAGCAAATACCAAATCATTTTGCTGCCTGGACTTGTCTTTCATGGCTTCAAT
TACTTTTGAAAAATAATGAAGAAGCTTTAGAAGCAGCCAGACAAGCTGTTCGATTAAATCAGCAAGATCCACAAGCTCGA
ATGAATTTGTCTTTAGCGCTTTTGGCAACAAATAATAAAGGTGTTAGGGATCATGTTGAGTTAATAAAAAAAATGTCTAT
GATGATGCCAGATGTTAAAAGTGAGTTGAAAGAATCTGTTGAAGACGGATTTAGTAGATATCCAGATTGGCCTGAGTTAA
ACAAAGTTAAAAAATGGTTGGAATTTTAA

Upstream 100 bases:

>100_bases
AGATTTTAGTAAGGAATTAATTGGCGGTGGCTTTAATTTTGTAAACCCTAATGCTTCTCAAACTTGTGGTTGTGGAAGTT
CCTTTGCAGTTTAAATTACA

Downstream 100 bases:

>100_bases
ATTGTCTAGAATTTTATTATTGAGTAACGGACATGGAGAAGATTTATCTGGGAGCTTGATAGCTAAGCAAATTGTAAAAA
GTGGTCATTCTGTAGAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MNNEINPIEEDFNAALSKYKDGQDLIPIVQDFQKIIQQIPNHFAAWTCLSWLQLLLKNNEEALEAARQAVRLNQQDPQAR
MNLSLALLATNNKGVRDHVELIKKMSMMMPDVKSELKESVEDGFSRYPDWPELNKVKKWLEF

Sequences:

>Translated_142_residues
MNNEINPIEEDFNAALSKYKDGQDLIPIVQDFQKIIQQIPNHFAAWTCLSWLQLLLKNNEEALEAARQAVRLNQQDPQAR
MNLSLALLATNNKGVRDHVELIKKMSMMMPDVKSELKESVEDGFSRYPDWPELNKVKKWLEF
>Mature_142_residues
MNNEINPIEEDFNAALSKYKDGQDLIPIVQDFQKIIQQIPNHFAAWTCLSWLQLLLKNNEEALEAARQAVRLNQQDPQAR
MNLSLALLATNNKGVRDHVELIKKMSMMMPDVKSELKESVEDGFSRYPDWPELNKVKKWLEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16512; Mature: 16512

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNEINPIEEDFNAALSKYKDGQDLIPIVQDFQKIIQQIPNHFAAWTCLSWLQLLLKNNE
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EALEAARQAVRLNQQDPQARMNLSLALLATNNKGVRDHVELIKKMSMMMPDVKSELKESV
HHHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH
EDGFSRYPDWPELNKVKKWLEF
HHHHHHCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MNNEINPIEEDFNAALSKYKDGQDLIPIVQDFQKIIQQIPNHFAAWTCLSWLQLLLKNNE
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EALEAARQAVRLNQQDPQARMNLSLALLATNNKGVRDHVELIKKMSMMMPDVKSELKESV
HHHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH
EDGFSRYPDWPELNKVKKWLEF
HHHHHHCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA