Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
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Accession | NC_007577 |
Length | 1,709,204 |
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The map label for this gene is 78778507
Identifier: 78778507
GI number: 78778507
Start: 118907
End: 120118
Strand: Direct
Name: 78778507
Synonym: PMT9312_0121
Alternate gene names: NA
Gene position: 118907-120118 (Clockwise)
Preceding gene: 78778506
Following gene: 78778508
Centisome position: 6.96
GC content: 27.81
Gene sequence:
>1212_bases TTGTCTAGAATTTTATTATTGAGTAACGGACATGGAGAAGATTTATCTGGGAGCTTGATAGCTAAGCAAATTGTAAAAAG TGGTCATTCTGTAGAAGCTTTACCAATTGTTGGTAAAGGAACTCATTACGAAAAAGAAAAAATTAAGATTTATGGAATAA CTCAAGAATTTAGTACTGGAGGTATTGGCTATAATTCTTTTAAGGGGAGACTAATAGAGATATTTAGAGGAGAAGTAGTT TATCTTCTAAAAAGATTATATTTAACTTATAAATTAAGAAAAAAATATGATTATTTTTTTGTAGTTGGAGATATTGTGCC AGTTTTTTTTGCATGGATTTGTAAGAAAGATTTTTTTACATATCTAGTTGCTTATTCCAGTCATTATGAAGGAAAGTTAA AATTACCATGGCCTTCTAAATTTTTCTTGGTCTCACAAAAGGCAAAAAAAATATATACAAGAGATTCTCTTACAGCTAAT GATTTAACTTTGCAATTAAAAAAGAAAGTGTCTTTTTTAGGTAATCCATTTATGGATAAGTTTTTTCCTAGAAATAAAGA ATTAAAGAAATCTGAATTTAGTATTGGATTATTTCCAGGAAGTAGATTCCCCGAGATTTTAGATAATTTTGTTTTGATTT TAGAGGTATTAGAGGCACTGTCAGATTTAAGATATTTTCAAAAAATTGAGTTTAATTTTGCAATAGTTAATGCTTTATCT CCATCAAAAATCAAGGAGATATTTCAAAATAGAAAATGGTTATACCTAGAAAAAATAAAAGAGAAGTATCTCTTGAAATT TCAATATAAAACTATAGAAGTAAATATATATTGGAATAATTTTGACAAAATATTATTGAAAAGTAGATGCTGTATCAGCA TGGCAGGAACGGCAGCAGAGCAAGCGATTGGATTAGGAAAACCGGTTATTCAGATTGAAGGTAAAGGTCCACAATTTACA AAATCTTTTGCAGAAGCACAAAGACGTTTGCTTGGAAAATTTGTTTTTTGTGCCAGTAATTATAAAGATAAGAATGATCA AATAAATGAGACAATAAAATTGATCATAAAAGTAATATATCTAATAAAGCTAAATAAGAGGTTTATGATCTCATGTAATG AAAATGCCAAAAAAAGACTTGGTGAAAAGAAAGCTTGTCTTAAGATGGTTGATGATATGAATATTGTTATCAAAAATGAC TCAGGAAAATAA
Upstream 100 bases:
>100_bases GATGTTAAAAGTGAGTTGAAAGAATCTGTTGAAGACGGATTTAGTAGATATCCAGATTGGCCTGAGTTAAACAAAGTTAA AAAATGGTTGGAATTTTAAA
Downstream 100 bases:
>100_bases TCAAAATTACTTAAAACAAATAATTGATAATTTGTTATTAATAAACTTATTTACAGTAATTTTTTTTGCAATATTTTTTA TTTTTGCAATCATCATGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MSRILLLSNGHGEDLSGSLIAKQIVKSGHSVEALPIVGKGTHYEKEKIKIYGITQEFSTGGIGYNSFKGRLIEIFRGEVV YLLKRLYLTYKLRKKYDYFFVVGDIVPVFFAWICKKDFFTYLVAYSSHYEGKLKLPWPSKFFLVSQKAKKIYTRDSLTAN DLTLQLKKKVSFLGNPFMDKFFPRNKELKKSEFSIGLFPGSRFPEILDNFVLILEVLEALSDLRYFQKIEFNFAIVNALS PSKIKEIFQNRKWLYLEKIKEKYLLKFQYKTIEVNIYWNNFDKILLKSRCCISMAGTAAEQAIGLGKPVIQIEGKGPQFT KSFAEAQRRLLGKFVFCASNYKDKNDQINETIKLIIKVIYLIKLNKRFMISCNENAKKRLGEKKACLKMVDDMNIVIKND SGK
Sequences:
>Translated_403_residues MSRILLLSNGHGEDLSGSLIAKQIVKSGHSVEALPIVGKGTHYEKEKIKIYGITQEFSTGGIGYNSFKGRLIEIFRGEVV YLLKRLYLTYKLRKKYDYFFVVGDIVPVFFAWICKKDFFTYLVAYSSHYEGKLKLPWPSKFFLVSQKAKKIYTRDSLTAN DLTLQLKKKVSFLGNPFMDKFFPRNKELKKSEFSIGLFPGSRFPEILDNFVLILEVLEALSDLRYFQKIEFNFAIVNALS PSKIKEIFQNRKWLYLEKIKEKYLLKFQYKTIEVNIYWNNFDKILLKSRCCISMAGTAAEQAIGLGKPVIQIEGKGPQFT KSFAEAQRRLLGKFVFCASNYKDKNDQINETIKLIIKVIYLIKLNKRFMISCNENAKKRLGEKKACLKMVDDMNIVIKND SGK >Mature_402_residues SRILLLSNGHGEDLSGSLIAKQIVKSGHSVEALPIVGKGTHYEKEKIKIYGITQEFSTGGIGYNSFKGRLIEIFRGEVVY LLKRLYLTYKLRKKYDYFFVVGDIVPVFFAWICKKDFFTYLVAYSSHYEGKLKLPWPSKFFLVSQKAKKIYTRDSLTAND LTLQLKKKVSFLGNPFMDKFFPRNKELKKSEFSIGLFPGSRFPEILDNFVLILEVLEALSDLRYFQKIEFNFAIVNALSP SKIKEIFQNRKWLYLEKIKEKYLLKFQYKTIEVNIYWNNFDKILLKSRCCISMAGTAAEQAIGLGKPVIQIEGKGPQFTK SFAEAQRRLLGKFVFCASNYKDKNDQINETIKLIIKVIYLIKLNKRFMISCNENAKKRLGEKKACLKMVDDMNIVIKNDS GK
Specific function: Unknown
COG id: COG4370
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46642; Mature: 46510
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRILLLSNGHGEDLSGSLIAKQIVKSGHSVEALPIVGKGTHYEKEKIKIYGITQEFSTG CCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCCC GIGYNSFKGRLIEIFRGEVVYLLKRLYLTYKLRKKYDYFFVVGDIVPVFFAWICKKDFFT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHH YLVAYSSHYEGKLKLPWPSKFFLVSQKAKKIYTRDSLTANDLTLQLKKKVSFLGNPFMDK HHHHHCCCCCCEEECCCCCCEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHH FFPRNKELKKSEFSIGLFPGSRFPEILDNFVLILEVLEALSDLRYFQKIEFNFAIVNALS HCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC PSKIKEIFQNRKWLYLEKIKEKYLLKFQYKTIEVNIYWNNFDKILLKSRCCISMAGTAAE HHHHHHHHHCCCEEHHHHHHHHHEEEEEEEEEEEEEEECCHHHHHHHHCCCEEECCCHHH QAIGLGKPVIQIEGKGPQFTKSFAEAQRRLLGKFVFCASNYKDKNDQINETIKLIIKVIY HHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHH LIKLNKRFMISCNENAKKRLGEKKACLKMVDDMNIVIKNDSGK HHCCCCEEEEEECCCHHHHCCHHHHHHHHHCCCEEEEECCCCC >Mature Secondary Structure SRILLLSNGHGEDLSGSLIAKQIVKSGHSVEALPIVGKGTHYEKEKIKIYGITQEFSTG CEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCCC GIGYNSFKGRLIEIFRGEVVYLLKRLYLTYKLRKKYDYFFVVGDIVPVFFAWICKKDFFT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHH YLVAYSSHYEGKLKLPWPSKFFLVSQKAKKIYTRDSLTANDLTLQLKKKVSFLGNPFMDK HHHHHCCCCCCEEECCCCCCEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHH FFPRNKELKKSEFSIGLFPGSRFPEILDNFVLILEVLEALSDLRYFQKIEFNFAIVNALS HCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC PSKIKEIFQNRKWLYLEKIKEKYLLKFQYKTIEVNIYWNNFDKILLKSRCCISMAGTAAE HHHHHHHHHCCCEEHHHHHHHHHEEEEEEEEEEEEEEECCHHHHHHHHCCCEEECCCHHH QAIGLGKPVIQIEGKGPQFTKSFAEAQRRLLGKFVFCASNYKDKNDQINETIKLIIKVIY HHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHH LIKLNKRFMISCNENAKKRLGEKKACLKMVDDMNIVIKNDSGK HHCCCCEEEEEECCCHHHHCCHHHHHHHHHCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA