Definition Prochlorococcus marinus str. MIT 9312, complete genome.
Accession NC_007577
Length 1,709,204

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The map label for this gene is 78778507

Identifier: 78778507

GI number: 78778507

Start: 118907

End: 120118

Strand: Direct

Name: 78778507

Synonym: PMT9312_0121

Alternate gene names: NA

Gene position: 118907-120118 (Clockwise)

Preceding gene: 78778506

Following gene: 78778508

Centisome position: 6.96

GC content: 27.81

Gene sequence:

>1212_bases
TTGTCTAGAATTTTATTATTGAGTAACGGACATGGAGAAGATTTATCTGGGAGCTTGATAGCTAAGCAAATTGTAAAAAG
TGGTCATTCTGTAGAAGCTTTACCAATTGTTGGTAAAGGAACTCATTACGAAAAAGAAAAAATTAAGATTTATGGAATAA
CTCAAGAATTTAGTACTGGAGGTATTGGCTATAATTCTTTTAAGGGGAGACTAATAGAGATATTTAGAGGAGAAGTAGTT
TATCTTCTAAAAAGATTATATTTAACTTATAAATTAAGAAAAAAATATGATTATTTTTTTGTAGTTGGAGATATTGTGCC
AGTTTTTTTTGCATGGATTTGTAAGAAAGATTTTTTTACATATCTAGTTGCTTATTCCAGTCATTATGAAGGAAAGTTAA
AATTACCATGGCCTTCTAAATTTTTCTTGGTCTCACAAAAGGCAAAAAAAATATATACAAGAGATTCTCTTACAGCTAAT
GATTTAACTTTGCAATTAAAAAAGAAAGTGTCTTTTTTAGGTAATCCATTTATGGATAAGTTTTTTCCTAGAAATAAAGA
ATTAAAGAAATCTGAATTTAGTATTGGATTATTTCCAGGAAGTAGATTCCCCGAGATTTTAGATAATTTTGTTTTGATTT
TAGAGGTATTAGAGGCACTGTCAGATTTAAGATATTTTCAAAAAATTGAGTTTAATTTTGCAATAGTTAATGCTTTATCT
CCATCAAAAATCAAGGAGATATTTCAAAATAGAAAATGGTTATACCTAGAAAAAATAAAAGAGAAGTATCTCTTGAAATT
TCAATATAAAACTATAGAAGTAAATATATATTGGAATAATTTTGACAAAATATTATTGAAAAGTAGATGCTGTATCAGCA
TGGCAGGAACGGCAGCAGAGCAAGCGATTGGATTAGGAAAACCGGTTATTCAGATTGAAGGTAAAGGTCCACAATTTACA
AAATCTTTTGCAGAAGCACAAAGACGTTTGCTTGGAAAATTTGTTTTTTGTGCCAGTAATTATAAAGATAAGAATGATCA
AATAAATGAGACAATAAAATTGATCATAAAAGTAATATATCTAATAAAGCTAAATAAGAGGTTTATGATCTCATGTAATG
AAAATGCCAAAAAAAGACTTGGTGAAAAGAAAGCTTGTCTTAAGATGGTTGATGATATGAATATTGTTATCAAAAATGAC
TCAGGAAAATAA

Upstream 100 bases:

>100_bases
GATGTTAAAAGTGAGTTGAAAGAATCTGTTGAAGACGGATTTAGTAGATATCCAGATTGGCCTGAGTTAAACAAAGTTAA
AAAATGGTTGGAATTTTAAA

Downstream 100 bases:

>100_bases
TCAAAATTACTTAAAACAAATAATTGATAATTTGTTATTAATAAACTTATTTACAGTAATTTTTTTTGCAATATTTTTTA
TTTTTGCAATCATCATGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MSRILLLSNGHGEDLSGSLIAKQIVKSGHSVEALPIVGKGTHYEKEKIKIYGITQEFSTGGIGYNSFKGRLIEIFRGEVV
YLLKRLYLTYKLRKKYDYFFVVGDIVPVFFAWICKKDFFTYLVAYSSHYEGKLKLPWPSKFFLVSQKAKKIYTRDSLTAN
DLTLQLKKKVSFLGNPFMDKFFPRNKELKKSEFSIGLFPGSRFPEILDNFVLILEVLEALSDLRYFQKIEFNFAIVNALS
PSKIKEIFQNRKWLYLEKIKEKYLLKFQYKTIEVNIYWNNFDKILLKSRCCISMAGTAAEQAIGLGKPVIQIEGKGPQFT
KSFAEAQRRLLGKFVFCASNYKDKNDQINETIKLIIKVIYLIKLNKRFMISCNENAKKRLGEKKACLKMVDDMNIVIKND
SGK

Sequences:

>Translated_403_residues
MSRILLLSNGHGEDLSGSLIAKQIVKSGHSVEALPIVGKGTHYEKEKIKIYGITQEFSTGGIGYNSFKGRLIEIFRGEVV
YLLKRLYLTYKLRKKYDYFFVVGDIVPVFFAWICKKDFFTYLVAYSSHYEGKLKLPWPSKFFLVSQKAKKIYTRDSLTAN
DLTLQLKKKVSFLGNPFMDKFFPRNKELKKSEFSIGLFPGSRFPEILDNFVLILEVLEALSDLRYFQKIEFNFAIVNALS
PSKIKEIFQNRKWLYLEKIKEKYLLKFQYKTIEVNIYWNNFDKILLKSRCCISMAGTAAEQAIGLGKPVIQIEGKGPQFT
KSFAEAQRRLLGKFVFCASNYKDKNDQINETIKLIIKVIYLIKLNKRFMISCNENAKKRLGEKKACLKMVDDMNIVIKND
SGK
>Mature_402_residues
SRILLLSNGHGEDLSGSLIAKQIVKSGHSVEALPIVGKGTHYEKEKIKIYGITQEFSTGGIGYNSFKGRLIEIFRGEVVY
LLKRLYLTYKLRKKYDYFFVVGDIVPVFFAWICKKDFFTYLVAYSSHYEGKLKLPWPSKFFLVSQKAKKIYTRDSLTAND
LTLQLKKKVSFLGNPFMDKFFPRNKELKKSEFSIGLFPGSRFPEILDNFVLILEVLEALSDLRYFQKIEFNFAIVNALSP
SKIKEIFQNRKWLYLEKIKEKYLLKFQYKTIEVNIYWNNFDKILLKSRCCISMAGTAAEQAIGLGKPVIQIEGKGPQFTK
SFAEAQRRLLGKFVFCASNYKDKNDQINETIKLIIKVIYLIKLNKRFMISCNENAKKRLGEKKACLKMVDDMNIVIKNDS
GK

Specific function: Unknown

COG id: COG4370

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46642; Mature: 46510

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRILLLSNGHGEDLSGSLIAKQIVKSGHSVEALPIVGKGTHYEKEKIKIYGITQEFSTG
CCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCCC
GIGYNSFKGRLIEIFRGEVVYLLKRLYLTYKLRKKYDYFFVVGDIVPVFFAWICKKDFFT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHH
YLVAYSSHYEGKLKLPWPSKFFLVSQKAKKIYTRDSLTANDLTLQLKKKVSFLGNPFMDK
HHHHHCCCCCCEEECCCCCCEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHH
FFPRNKELKKSEFSIGLFPGSRFPEILDNFVLILEVLEALSDLRYFQKIEFNFAIVNALS
HCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
PSKIKEIFQNRKWLYLEKIKEKYLLKFQYKTIEVNIYWNNFDKILLKSRCCISMAGTAAE
HHHHHHHHHCCCEEHHHHHHHHHEEEEEEEEEEEEEEECCHHHHHHHHCCCEEECCCHHH
QAIGLGKPVIQIEGKGPQFTKSFAEAQRRLLGKFVFCASNYKDKNDQINETIKLIIKVIY
HHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHH
LIKLNKRFMISCNENAKKRLGEKKACLKMVDDMNIVIKNDSGK
HHCCCCEEEEEECCCHHHHCCHHHHHHHHHCCCEEEEECCCCC
>Mature Secondary Structure 
SRILLLSNGHGEDLSGSLIAKQIVKSGHSVEALPIVGKGTHYEKEKIKIYGITQEFSTG
CEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCCC
GIGYNSFKGRLIEIFRGEVVYLLKRLYLTYKLRKKYDYFFVVGDIVPVFFAWICKKDFFT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHH
YLVAYSSHYEGKLKLPWPSKFFLVSQKAKKIYTRDSLTANDLTLQLKKKVSFLGNPFMDK
HHHHHCCCCCCEEECCCCCCEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHH
FFPRNKELKKSEFSIGLFPGSRFPEILDNFVLILEVLEALSDLRYFQKIEFNFAIVNALS
HCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
PSKIKEIFQNRKWLYLEKIKEKYLLKFQYKTIEVNIYWNNFDKILLKSRCCISMAGTAAE
HHHHHHHHHCCCEEHHHHHHHHHEEEEEEEEEEEEEEECCHHHHHHHHCCCEEECCCHHH
QAIGLGKPVIQIEGKGPQFTKSFAEAQRRLLGKFVFCASNYKDKNDQINETIKLIIKVIY
HHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHH
LIKLNKRFMISCNENAKKRLGEKKACLKMVDDMNIVIKNDSGK
HHCCCCEEEEEECCCHHHHCCHHHHHHHHHCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA