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The map label for this gene is crtQ [H]

Identifier: 78778504

GI number: 78778504

Start: 116523

End: 118022

Strand: Reverse

Name: crtQ [H]

Synonym: PMT9312_0118

Alternate gene names: 78778504

Gene position: 118022-116523 (Counterclockwise)

Preceding gene: 78778509

Following gene: 78778503

Centisome position: 6.91

GC content: 35.13

Gene sequence:

>1500_bases
ATGAACCAATATCCAAACTTGATTTGTTATAATTTTAAGAAAAAAGTGAAAATTGCAATAGTCGGTTCTGGTTTAGCTGG
TCTCACAGCGGCAGTCAATTTAGTTGATGAAGGCCACGAAGTTGAAATTTACGAGAGCAGATCTTTTTGGGGAGGTAAAG
TTGGGAGTTGGGAGGATAAGGATGGCAACCATATAGAGATGGGATTACATGTATTTTTCTATAATTATGCAAATCTATTT
AAGTTAATGAAAAAAGTGGGGGCTTTGGATAATTTACTCCCGAAAGATCATACTCATTTGTTCATAAATAATGGTGGCAA
TTTGAAATCTTTAGATTTCAGATTTCCATTAGGTGCACCTTTTAATGGGCTAAAAGCATTTTTTACAACTGAACAACTTA
CTTGGGTAGACAAATTCAGAAACGCTCTAGCTTTAGGGACAAGTCCAATAGTTCGAGGATTAATAGATTATGAAGGTGCA
ATGAAAATAATTAGGGATCTAGATAGGATTAGCTTTAAAGAATGGTTCTTAAACCATGGTGGTAGTGAAAAAAGTTTAGC
AAGAATGTGGGATCCCATTGCATATGCATTGGGCTTTATCAATTGCAAAGATATTTCAGCAAGATGTATGCTAACTATCT
TCATGATGTTTGCTTCAAAAACGGAAGCCTCCAAACTTAATCTTTTAAAAGGTTCGCCTCATAAGTGGCTTACACAACCT
ATTGTCGATTACATCACAAAGAAAGGGGCTAAAATCCATTTAAACCATAAGGTAGAAGAAATTATTTATGAAAAGTATTC
TTCCTCTTATTCCGTTAATCAGTTAAAAATATCCTCTCCTGAAGGAACTAAGACAGTTTTTGCAGATAAATTTCTTGCTG
CCTGTGACGTTCCTGGGATAAAAAAAATAGTTCCAGAAGAATGGTATCAATTTAAAGAATTTGCAGGTTTAAAAAAACTT
AGAGCAGTTGCAGTAGCCACAATCCAATTAAGATACGACGGTTGGGTTACTGAATTACAAAAAGATAATACTGGAAACTC
GCCTACTGGACTCGATAACCTTCTATATTCTGCTGATGCTTCTTTCAGTTGTTTCGCTGATTTAGCACTAGCAAGTCCAG
CAGATTATAGAAAAAAAGATGTGGGATCACTACTTCAATGTGTTTTAACTCCGGGTGATAGATGGATGGGAAGATCTACA
GAAAGAATTACACAAGAAATTGATAAAGAAGTTCGCCGTCTATTCCCATCTTCAAAAAACCTTAAATTGCTTTGGAGTAA
CGTAGTACAAATTCCGCAATCTCTTTATAGAGAATCTCCAGGTATGGAAAAATTTAGACCCGATCAAAAAACATCTATAC
CTAATTTCTTTATGGCTGGTAGTTACACAAAACAAGATTATATAGACTCTATGGAGGGAGCTACAATGAGTGGGCATTTA
GCTGCAGCAGCAATTTTAGAGAAGAAAGCTGAATTAGCAAAAAATCTTACAGTAAATTAA

Upstream 100 bases:

>100_bases
ATCATCAGAATTCTTAATTTCCTGCTTAACTTCTAAATTTTCCATAACCAGAAATTTCCTACTATTTATAATATAAAAAC
TAAATCGTTAGGGTGCATAG

Downstream 100 bases:

>100_bases
CTAATGGGTACCTGGCTAAAACATGACGTAATAACAGTCGTTAATGCGCCGCTTGAAAATGTTTGGAATACATGGAGTGA
TTTAGACTCAATGTCACTGT

Product: zeta-carotene desaturase

Products: NA

Alternate protein names: Carotene 7,8-desaturase [H]

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MNQYPNLICYNFKKKVKIAIVGSGLAGLTAAVNLVDEGHEVEIYESRSFWGGKVGSWEDKDGNHIEMGLHVFFYNYANLF
KLMKKVGALDNLLPKDHTHLFINNGGNLKSLDFRFPLGAPFNGLKAFFTTEQLTWVDKFRNALALGTSPIVRGLIDYEGA
MKIIRDLDRISFKEWFLNHGGSEKSLARMWDPIAYALGFINCKDISARCMLTIFMMFASKTEASKLNLLKGSPHKWLTQP
IVDYITKKGAKIHLNHKVEEIIYEKYSSSYSVNQLKISSPEGTKTVFADKFLAACDVPGIKKIVPEEWYQFKEFAGLKKL
RAVAVATIQLRYDGWVTELQKDNTGNSPTGLDNLLYSADASFSCFADLALASPADYRKKDVGSLLQCVLTPGDRWMGRST
ERITQEIDKEVRRLFPSSKNLKLLWSNVVQIPQSLYRESPGMEKFRPDQKTSIPNFFMAGSYTKQDYIDSMEGATMSGHL
AAAAILEKKAELAKNLTVN

Sequences:

>Translated_499_residues
MNQYPNLICYNFKKKVKIAIVGSGLAGLTAAVNLVDEGHEVEIYESRSFWGGKVGSWEDKDGNHIEMGLHVFFYNYANLF
KLMKKVGALDNLLPKDHTHLFINNGGNLKSLDFRFPLGAPFNGLKAFFTTEQLTWVDKFRNALALGTSPIVRGLIDYEGA
MKIIRDLDRISFKEWFLNHGGSEKSLARMWDPIAYALGFINCKDISARCMLTIFMMFASKTEASKLNLLKGSPHKWLTQP
IVDYITKKGAKIHLNHKVEEIIYEKYSSSYSVNQLKISSPEGTKTVFADKFLAACDVPGIKKIVPEEWYQFKEFAGLKKL
RAVAVATIQLRYDGWVTELQKDNTGNSPTGLDNLLYSADASFSCFADLALASPADYRKKDVGSLLQCVLTPGDRWMGRST
ERITQEIDKEVRRLFPSSKNLKLLWSNVVQIPQSLYRESPGMEKFRPDQKTSIPNFFMAGSYTKQDYIDSMEGATMSGHL
AAAAILEKKAELAKNLTVN
>Mature_499_residues
MNQYPNLICYNFKKKVKIAIVGSGLAGLTAAVNLVDEGHEVEIYESRSFWGGKVGSWEDKDGNHIEMGLHVFFYNYANLF
KLMKKVGALDNLLPKDHTHLFINNGGNLKSLDFRFPLGAPFNGLKAFFTTEQLTWVDKFRNALALGTSPIVRGLIDYEGA
MKIIRDLDRISFKEWFLNHGGSEKSLARMWDPIAYALGFINCKDISARCMLTIFMMFASKTEASKLNLLKGSPHKWLTQP
IVDYITKKGAKIHLNHKVEEIIYEKYSSSYSVNQLKISSPEGTKTVFADKFLAACDVPGIKKIVPEEWYQFKEFAGLKKL
RAVAVATIQLRYDGWVTELQKDNTGNSPTGLDNLLYSADASFSCFADLALASPADYRKKDVGSLLQCVLTPGDRWMGRST
ERITQEIDKEVRRLFPSSKNLKLLWSNVVQIPQSLYRESPGMEKFRPDQKTSIPNFFMAGSYTKQDYIDSMEGATMSGHL
AAAAILEKKAELAKNLTVN

Specific function: Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7' [H]

COG id: COG3349

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zeta carotene desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR014103
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: =1.14.99.30 [H]

Molecular weight: Translated: 56165; Mature: 56165

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQYPNLICYNFKKKVKIAIVGSGLAGLTAAVNLVDEGHEVEIYESRSFWGGKVGSWEDK
CCCCCCEEEEECCCEEEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC
DGNHIEMGLHVFFYNYANLFKLMKKVGALDNLLPKDHTHLFINNGGNLKSLDFRFPLGAP
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCCC
FNGLKAFFTTEQLTWVDKFRNALALGTSPIVRGLIDYEGAMKIIRDLDRISFKEWFLNHG
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GSEKSLARMWDPIAYALGFINCKDISARCMLTIFMMFASKTEASKLNLLKGSPHKWLTQP
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHH
IVDYITKKGAKIHLNHKVEEIIYEKYSSSYSVNQLKISSPEGTKTVFADKFLAACDVPGI
HHHHHHCCCCEEEECHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCH
KKIVPEEWYQFKEFAGLKKLRAVAVATIQLRYDGWVTELQKDNTGNSPTGLDNLLYSADA
HHHCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHHCCCCCCCCCCHHHHHHHCCC
SFSCFADLALASPADYRKKDVGSLLQCVLTPGDRWMGRSTERITQEIDKEVRRLFPSSKN
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCC
LKLLWSNVVQIPQSLYRESPGMEKFRPDQKTSIPNFFMAGSYTKQDYIDSMEGATMSGHL
HHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCHH
AAAAILEKKAELAKNLTVN
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNQYPNLICYNFKKKVKIAIVGSGLAGLTAAVNLVDEGHEVEIYESRSFWGGKVGSWEDK
CCCCCCEEEEECCCEEEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC
DGNHIEMGLHVFFYNYANLFKLMKKVGALDNLLPKDHTHLFINNGGNLKSLDFRFPLGAP
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCCC
FNGLKAFFTTEQLTWVDKFRNALALGTSPIVRGLIDYEGAMKIIRDLDRISFKEWFLNHG
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GSEKSLARMWDPIAYALGFINCKDISARCMLTIFMMFASKTEASKLNLLKGSPHKWLTQP
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHH
IVDYITKKGAKIHLNHKVEEIIYEKYSSSYSVNQLKISSPEGTKTVFADKFLAACDVPGI
HHHHHHCCCCEEEECHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCH
KKIVPEEWYQFKEFAGLKKLRAVAVATIQLRYDGWVTELQKDNTGNSPTGLDNLLYSADA
HHHCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHHCCCCCCCCCCHHHHHHHCCC
SFSCFADLALASPADYRKKDVGSLLQCVLTPGDRWMGRSTERITQEIDKEVRRLFPSSKN
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCC
LKLLWSNVVQIPQSLYRESPGMEKFRPDQKTSIPNFFMAGSYTKQDYIDSMEGATMSGHL
HHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCHH
AAAAILEKKAELAKNLTVN
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]