Definition Prochlorococcus marinus str. MIT 9312, complete genome.
Accession NC_007577
Length 1,709,204

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The map label for this gene is 78778503

Identifier: 78778503

GI number: 78778503

Start: 116049

End: 116519

Strand: Reverse

Name: 78778503

Synonym: PMT9312_0117

Alternate gene names: NA

Gene position: 116519-116049 (Counterclockwise)

Preceding gene: 78778504

Following gene: 78778499

Centisome position: 6.82

GC content: 32.48

Gene sequence:

>471_bases
ATGGGTACCTGGCTAAAACATGACGTAATAACAGTCGTTAATGCGCCGCTTGAAAATGTTTGGAATACATGGAGTGATTT
AGACTCAATGTCACTGTGGATGAGCTGGATTGAATCAGTAAAAACAGTTGATGAAGAAACAACGACATTACCAGATTTAA
CAGAATGGACTTTAGCTGCAAATGGTTTTAAGTTTAAATGGAAAGCTCAAATTACAGAAAGAATTGATAAAAGTAAACTT
AAGTGGAAATCTATAGGAGGTTTACCAACTGAAGGATCAGTAGTTTTCGAAAGCAAAAGTGATCAAATAACAACAGTAAA
TTTAGCAATAACATATGAGCTACCTAAAATGATTGCGCGGTTTATGGAAGAGAATATTTTAGGCAAAATGGTCACTAACG
AATTACAGGCTAATATTGATAGATTTAAAGAATTAGTGGAAAAGAATTATAAAAAAGATTTTTCTAACTAA

Upstream 100 bases:

>100_bases
AGACTCTATGGAGGGAGCTACAATGAGTGGGCATTTAGCTGCAGCAGCAATTTTAGAGAAGAAAGCTGAATTAGCAAAAA
ATCTTACAGTAAATTAACTA

Downstream 100 bases:

>100_bases
AAATACTAATTGCTACATCCAGTAGTCCATCAAAAGTATATTTTTGTGCCTGACTATCAACTCTGCCAAAAATCTTTTTA
CATATTTTTGTTGTTTGAGG

Product: putative integral membrane protein

Products: NA

Alternate protein names: Integral Membrane Protein; Streptomyces Cyclase/Dehydrase Superfamily; Involved In Polyketide Synthesis; Streptomyces Cyclase/Dehydrase; Polyketide Cyclase / Dehydrase Family Protein

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MGTWLKHDVITVVNAPLENVWNTWSDLDSMSLWMSWIESVKTVDEETTTLPDLTEWTLAANGFKFKWKAQITERIDKSKL
KWKSIGGLPTEGSVVFESKSDQITTVNLAITYELPKMIARFMEENILGKMVTNELQANIDRFKELVEKNYKKDFSN

Sequences:

>Translated_156_residues
MGTWLKHDVITVVNAPLENVWNTWSDLDSMSLWMSWIESVKTVDEETTTLPDLTEWTLAANGFKFKWKAQITERIDKSKL
KWKSIGGLPTEGSVVFESKSDQITTVNLAITYELPKMIARFMEENILGKMVTNELQANIDRFKELVEKNYKKDFSN
>Mature_155_residues
GTWLKHDVITVVNAPLENVWNTWSDLDSMSLWMSWIESVKTVDEETTTLPDLTEWTLAANGFKFKWKAQITERIDKSKLK
WKSIGGLPTEGSVVFESKSDQITTVNLAITYELPKMIARFMEENILGKMVTNELQANIDRFKELVEKNYKKDFSN

Specific function: Unknown

COG id: COG5637

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18039; Mature: 17908

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTWLKHDVITVVNAPLENVWNTWSDLDSMSLWMSWIESVKTVDEETTTLPDLTEWTLAA
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHCC
NGFKFKWKAQITERIDKSKLKWKSIGGLPTEGSVVFESKSDQITTVNLAITYELPKMIAR
CCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEEEEHHHHHHHH
FMEENILGKMVTNELQANIDRFKELVEKNYKKDFSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GTWLKHDVITVVNAPLENVWNTWSDLDSMSLWMSWIESVKTVDEETTTLPDLTEWTLAA
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHCC
NGFKFKWKAQITERIDKSKLKWKSIGGLPTEGSVVFESKSDQITTVNLAITYELPKMIAR
CCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEEEEHHHHHHHH
FMEENILGKMVTNELQANIDRFKELVEKNYKKDFSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA