| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78778503
Identifier: 78778503
GI number: 78778503
Start: 116049
End: 116519
Strand: Reverse
Name: 78778503
Synonym: PMT9312_0117
Alternate gene names: NA
Gene position: 116519-116049 (Counterclockwise)
Preceding gene: 78778504
Following gene: 78778499
Centisome position: 6.82
GC content: 32.48
Gene sequence:
>471_bases ATGGGTACCTGGCTAAAACATGACGTAATAACAGTCGTTAATGCGCCGCTTGAAAATGTTTGGAATACATGGAGTGATTT AGACTCAATGTCACTGTGGATGAGCTGGATTGAATCAGTAAAAACAGTTGATGAAGAAACAACGACATTACCAGATTTAA CAGAATGGACTTTAGCTGCAAATGGTTTTAAGTTTAAATGGAAAGCTCAAATTACAGAAAGAATTGATAAAAGTAAACTT AAGTGGAAATCTATAGGAGGTTTACCAACTGAAGGATCAGTAGTTTTCGAAAGCAAAAGTGATCAAATAACAACAGTAAA TTTAGCAATAACATATGAGCTACCTAAAATGATTGCGCGGTTTATGGAAGAGAATATTTTAGGCAAAATGGTCACTAACG AATTACAGGCTAATATTGATAGATTTAAAGAATTAGTGGAAAAGAATTATAAAAAAGATTTTTCTAACTAA
Upstream 100 bases:
>100_bases AGACTCTATGGAGGGAGCTACAATGAGTGGGCATTTAGCTGCAGCAGCAATTTTAGAGAAGAAAGCTGAATTAGCAAAAA ATCTTACAGTAAATTAACTA
Downstream 100 bases:
>100_bases AAATACTAATTGCTACATCCAGTAGTCCATCAAAAGTATATTTTTGTGCCTGACTATCAACTCTGCCAAAAATCTTTTTA CATATTTTTGTTGTTTGAGG
Product: putative integral membrane protein
Products: NA
Alternate protein names: Integral Membrane Protein; Streptomyces Cyclase/Dehydrase Superfamily; Involved In Polyketide Synthesis; Streptomyces Cyclase/Dehydrase; Polyketide Cyclase / Dehydrase Family Protein
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MGTWLKHDVITVVNAPLENVWNTWSDLDSMSLWMSWIESVKTVDEETTTLPDLTEWTLAANGFKFKWKAQITERIDKSKL KWKSIGGLPTEGSVVFESKSDQITTVNLAITYELPKMIARFMEENILGKMVTNELQANIDRFKELVEKNYKKDFSN
Sequences:
>Translated_156_residues MGTWLKHDVITVVNAPLENVWNTWSDLDSMSLWMSWIESVKTVDEETTTLPDLTEWTLAANGFKFKWKAQITERIDKSKL KWKSIGGLPTEGSVVFESKSDQITTVNLAITYELPKMIARFMEENILGKMVTNELQANIDRFKELVEKNYKKDFSN >Mature_155_residues GTWLKHDVITVVNAPLENVWNTWSDLDSMSLWMSWIESVKTVDEETTTLPDLTEWTLAANGFKFKWKAQITERIDKSKLK WKSIGGLPTEGSVVFESKSDQITTVNLAITYELPKMIARFMEENILGKMVTNELQANIDRFKELVEKNYKKDFSN
Specific function: Unknown
COG id: COG5637
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18039; Mature: 17908
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTWLKHDVITVVNAPLENVWNTWSDLDSMSLWMSWIESVKTVDEETTTLPDLTEWTLAA CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHCC NGFKFKWKAQITERIDKSKLKWKSIGGLPTEGSVVFESKSDQITTVNLAITYELPKMIAR CCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEEEEHHHHHHHH FMEENILGKMVTNELQANIDRFKELVEKNYKKDFSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GTWLKHDVITVVNAPLENVWNTWSDLDSMSLWMSWIESVKTVDEETTTLPDLTEWTLAA CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHCC NGFKFKWKAQITERIDKSKLKWKSIGGLPTEGSVVFESKSDQITTVNLAITYELPKMIAR CCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEEEEHHHHHHHH FMEENILGKMVTNELQANIDRFKELVEKNYKKDFSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA