Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
---|---|
Accession | NC_007577 |
Length | 1,709,204 |
Click here to switch to the map view.
The map label for this gene is 78778500
Identifier: 78778500
GI number: 78778500
Start: 114671
End: 114880
Strand: Direct
Name: 78778500
Synonym: PMT9312_0114
Alternate gene names: NA
Gene position: 114671-114880 (Clockwise)
Preceding gene: 78778498
Following gene: 78778501
Centisome position: 6.71
GC content: 30.95
Gene sequence:
>210_bases ATGGGCGAATTTTTCTCTAATGTTGCAAGATATCCCAAGTATTTAATATCTATTATTATTGGAGGACTTGTTGCACTGCT TGAACCTTTATTCAAGAATCGATCAAATCCACTCACAATAGTAGGTTTAATATCTTCTGTTTTAAGTGCTTTCATAACAG TCTATTTTGTCTTGCAAGCAATGACAAATCCAATAAATTTACAATCATAA
Upstream 100 bases:
>100_bases TTTTTAAACAAAAAGCACTATGCCTAAATTGATATAATGTAATCATGCTGTTTAATGTTTTTTAAAACTTAGCTAAAAAA GTAATCTATTTGTGGAGCTG
Downstream 100 bases:
>100_bases TGCCAAATAATTTCCGTCTTGCAAAAGTTTCTTCTCTTTTAAAGAAAGAAATCACCCTTATTTTGCAAAATGATTTGGAA AATGATCTTATTAGAGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MGEFFSNVARYPKYLISIIIGGLVALLEPLFKNRSNPLTIVGLISSVLSAFITVYFVLQAMTNPINLQS
Sequences:
>Translated_69_residues MGEFFSNVARYPKYLISIIIGGLVALLEPLFKNRSNPLTIVGLISSVLSAFITVYFVLQAMTNPINLQS >Mature_68_residues GEFFSNVARYPKYLISIIIGGLVALLEPLFKNRSNPLTIVGLISSVLSAFITVYFVLQAMTNPINLQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7605; Mature: 7474
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEFFSNVARYPKYLISIIIGGLVALLEPLFKNRSNPLTIVGLISSVLSAFITVYFVLQA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH MTNPINLQS HCCCCCCCC >Mature Secondary Structure GEFFSNVARYPKYLISIIIGGLVALLEPLFKNRSNPLTIVGLISSVLSAFITVYFVLQA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH MTNPINLQS HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA