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The map label for this gene is ytxE [H]

Identifier: 78358627

GI number: 78358627

Start: 3545350

End: 3546270

Strand: Reverse

Name: ytxE [H]

Synonym: Dde_3588

Alternate gene names: 78358627

Gene position: 3546270-3545350 (Counterclockwise)

Preceding gene: 78358628

Following gene: 78358626

Centisome position: 95.07

GC content: 59.07

Gene sequence:

>921_bases
ATGGCGCGCAAGAAGAACAAAAAAGGCGGCGGGGGCGGCGCCCCCAAATGGCTCATCACGTTTTCGGACATGATGACCCT
GATGCTGACTTTTTTCGTGCTGCTGGTAAGTATGTCCGTGCTGGATGAACGCCGCAAACTGGTTGTGCTGGCTTCTGTCA
CCGGAGCATTCGGCATCGGTTCCGGCAGTTTCAACCCGCATGCTGAAGACGGTGCCAACCGCATAGTGGAACCGGGCCCC
ATGCAGATGGGCAGCGTGAACGATCTGCAGCCGCTCAAGGATCTCATATGGGAAGATCCCGACAGCGATTTGAATTTTCA
GCAGAACAGCATGGTGCAGATACTGTCCATCAACGATGCCGTGCTGTTCAGGCCCGGCTCCTTTGTTCTGCTGCCGGGCG
GCATCAAGGTGCTGGACAGAATTCTGCCGTGGCTGCTGCGGGTTGAGCATCCGCTGCTTCTGGCAGGACACACGGCGACC
CAGCGTGCCGAAGAAGGGCAGGAGTACAAGGTTGTTTTTGATGAAAAGCAGCTGGCTCCCACCTGGCGGCTTTCCTTTAT
GCGGGTAATGGCCGTGTACCGGTACCTTACCGGCAGAGGCATGCCCGCGGAAAACCTCAAGGTTGAGGCTTTTGCCCACT
ACCGGCCGCGCTTTGACGGCACGACGCCCGACGGACGCAGGCGCAACAGCAGGGTTGATATCGTGCTCGACAAGCGCAAC
CGTGAATGGATACGCAAGATGCGCGAGCAGGAACAGCGTGCTTCCGCCGACAGGCGCAATTTTGAGTACAAGGACTTCCG
GTTTTCGCTGGATGCTCCGGTGGAAGGCCCTGTGGGCGGCAGGATGAACGACGGCGCACCGCCGCAGAATGATGACGTGC
CGCAGGACGCCGGCGGATTTGACAGTCTGGGGAGGCCGTAA

Upstream 100 bases:

>100_bases
CCAAAGAACGCAAGGCGGATGCCGGTTAGTCCGGCACCAGTGACCGCCGCAGGGCCGGCAGTGCTGCACCCGGTGCGGCA
GCACAACAAGGAAGCAGGGC

Downstream 100 bases:

>100_bases
CCATGGCGCGTGAAAAGAAACCGCCGGAGGAAGAAGGCGTCCCCATGTGGCTGGTGACGTTTTCCGACCTTGTCACGCTG
CTGCTTACGTTTTTCGTGCT

Product: OmpA family protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MARKKNKKGGGGGAPKWLITFSDMMTLMLTFFVLLVSMSVLDERRKLVVLASVTGAFGIGSGSFNPHAEDGANRIVEPGP
MQMGSVNDLQPLKDLIWEDPDSDLNFQQNSMVQILSINDAVLFRPGSFVLLPGGIKVLDRILPWLLRVEHPLLLAGHTAT
QRAEEGQEYKVVFDEKQLAPTWRLSFMRVMAVYRYLTGRGMPAENLKVEAFAHYRPRFDGTTPDGRRRNSRVDIVLDKRN
REWIRKMREQEQRASADRRNFEYKDFRFSLDAPVEGPVGGRMNDGAPPQNDDVPQDAGGFDSLGRP

Sequences:

>Translated_306_residues
MARKKNKKGGGGGAPKWLITFSDMMTLMLTFFVLLVSMSVLDERRKLVVLASVTGAFGIGSGSFNPHAEDGANRIVEPGP
MQMGSVNDLQPLKDLIWEDPDSDLNFQQNSMVQILSINDAVLFRPGSFVLLPGGIKVLDRILPWLLRVEHPLLLAGHTAT
QRAEEGQEYKVVFDEKQLAPTWRLSFMRVMAVYRYLTGRGMPAENLKVEAFAHYRPRFDGTTPDGRRRNSRVDIVLDKRN
REWIRKMREQEQRASADRRNFEYKDFRFSLDAPVEGPVGGRMNDGAPPQNDDVPQDAGGFDSLGRP
>Mature_305_residues
ARKKNKKGGGGGAPKWLITFSDMMTLMLTFFVLLVSMSVLDERRKLVVLASVTGAFGIGSGSFNPHAEDGANRIVEPGPM
QMGSVNDLQPLKDLIWEDPDSDLNFQQNSMVQILSINDAVLFRPGSFVLLPGGIKVLDRILPWLLRVEHPLLLAGHTATQ
RAEEGQEYKVVFDEKQLAPTWRLSFMRVMAVYRYLTGRGMPAENLKVEAFAHYRPRFDGTTPDGRRRNSRVDIVLDKRNR
EWIRKMREQEQRASADRRNFEYKDFRFSLDAPVEGPVGGRMNDGAPPQNDDVPQDAGGFDSLGRP

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 34448; Mature: 34317

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKKNKKGGGGGAPKWLITFSDMMTLMLTFFVLLVSMSVLDERRKLVVLASVTGAFGIG
CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEECC
SGSFNPHAEDGANRIVEPGPMQMGSVNDLQPLKDLIWEDPDSDLNFQQNSMVQILSINDA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCE
VLFRPGSFVLLPGGIKVLDRILPWLLRVEHPLLLAGHTATQRAEEGQEYKVVFDEKQLAP
EEECCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCEEEEECCCCCCH
TWRLSFMRVMAVYRYLTGRGMPAENLKVEAFAHYRPRFDGTTPDGRRRNSRVDIVLDKRN
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCC
REWIRKMREQEQRASADRRNFEYKDFRFSLDAPVEGPVGGRMNDGAPPQNDDVPQDAGGF
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DSLGRP
CCCCCC
>Mature Secondary Structure 
ARKKNKKGGGGGAPKWLITFSDMMTLMLTFFVLLVSMSVLDERRKLVVLASVTGAFGIG
CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEECC
SGSFNPHAEDGANRIVEPGPMQMGSVNDLQPLKDLIWEDPDSDLNFQQNSMVQILSINDA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCE
VLFRPGSFVLLPGGIKVLDRILPWLLRVEHPLLLAGHTATQRAEEGQEYKVVFDEKQLAP
EEECCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCEEEEECCCCCCH
TWRLSFMRVMAVYRYLTGRGMPAENLKVEAFAHYRPRFDGTTPDGRRRNSRVDIVLDKRN
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCC
REWIRKMREQEQRASADRRNFEYKDFRFSLDAPVEGPVGGRMNDGAPPQNDDVPQDAGGF
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DSLGRP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]