Click here to switch to the map view.

The map label for this gene is ytxE [H]

Identifier: 78358626

GI number: 78358626

Start: 3544619

End: 3545347

Strand: Reverse

Name: ytxE [H]

Synonym: Dde_3587

Alternate gene names: 78358626

Gene position: 3545347-3544619 (Counterclockwise)

Preceding gene: 78358627

Following gene: 78358625

Centisome position: 95.04

GC content: 58.71

Gene sequence:

>729_bases
ATGGCGCGTGAAAAGAAACCGCCGGAGGAAGAAGGCGTCCCCATGTGGCTGGTGACGTTTTCCGACCTTGTCACGCTGCT
GCTTACGTTTTTCGTGCTGCTTCTTTCCATGGCATCCATGGATCAGGTGCTGCTGTCGCGGATCAATCCCTATTCAAGCA
GCTTCAGCATCATGGGGTCCATGAGTCCGGGCCGTATTCCGCAGCGTATCCTGATGGTCATGGAATTGCTGGAATCGCCG
CGCGATGTCATGCAGAAACCCGAAAGGCTGAAGGATCTGCTGTGGCCCGAAGACATGTTGCCGCCCGAGGTGGATACCGC
TACACTGGATGAGAACCTGCGTATTATGCAGGATCCGCAGGGGCTTGCCATTGTGCTGACAGACGGGGTGCTGTTCCGTC
CGGGCAGCTGGGAGCTGACAGCCCCCGCGCGCAAGCTGCTTGCGCCGCTGGCGGATGTGCTGGAATACAGCTCCGCTGAT
GTGACCATCTCGGGCCATACAGACGACAGTCCCGCTTCGGGTGTGGATAATTATGACCTTTCCGGCCGCAGAGCCATGGC
CGTACTTGATTTTTTTCTGGAGAGCGGGCTTGGTGCGGAACGGTTTTCCGTTTCGGGATACGGCCCTGACAAGCCGCTGG
AATCCAACGCCACGCCGCAGGGCAGGGCGCAGAACAGACGGGTGGAAATTTTGCTCAAGACGACGCAGTGGCTGGGGCGC
TACAGCTAG

Upstream 100 bases:

>100_bases
AAGGCCCTGTGGGCGGCAGGATGAACGACGGCGCACCGCCGCAGAATGATGACGTGCCGCAGGACGCCGGCGGATTTGAC
AGTCTGGGGAGGCCGTAACC

Downstream 100 bases:

>100_bases
CAGCGCAAACCGGCAAGGAGAACAGCCGTGGCAGAAGAAAAAACGCAGGAAAAAAAGGGCGGCAAGCTCAAATGGATCAT
CATGATCGTCGTGCTGCTGT

Product: chemotaxis protein MotB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MAREKKPPEEEGVPMWLVTFSDLVTLLLTFFVLLLSMASMDQVLLSRINPYSSSFSIMGSMSPGRIPQRILMVMELLESP
RDVMQKPERLKDLLWPEDMLPPEVDTATLDENLRIMQDPQGLAIVLTDGVLFRPGSWELTAPARKLLAPLADVLEYSSAD
VTISGHTDDSPASGVDNYDLSGRRAMAVLDFFLESGLGAERFSVSGYGPDKPLESNATPQGRAQNRRVEILLKTTQWLGR
YS

Sequences:

>Translated_242_residues
MAREKKPPEEEGVPMWLVTFSDLVTLLLTFFVLLLSMASMDQVLLSRINPYSSSFSIMGSMSPGRIPQRILMVMELLESP
RDVMQKPERLKDLLWPEDMLPPEVDTATLDENLRIMQDPQGLAIVLTDGVLFRPGSWELTAPARKLLAPLADVLEYSSAD
VTISGHTDDSPASGVDNYDLSGRRAMAVLDFFLESGLGAERFSVSGYGPDKPLESNATPQGRAQNRRVEILLKTTQWLGR
YS
>Mature_241_residues
AREKKPPEEEGVPMWLVTFSDLVTLLLTFFVLLLSMASMDQVLLSRINPYSSSFSIMGSMSPGRIPQRILMVMELLESPR
DVMQKPERLKDLLWPEDMLPPEVDTATLDENLRIMQDPQGLAIVLTDGVLFRPGSWELTAPARKLLAPLADVLEYSSADV
TISGHTDDSPASGVDNYDLSGRRAMAVLDFFLESGLGAERFSVSGYGPDKPLESNATPQGRAQNRRVEILLKTTQWLGRY
S

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=107, Percent_Identity=39.2523364485981, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 26917; Mature: 26786

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAREKKPPEEEGVPMWLVTFSDLVTLLLTFFVLLLSMASMDQVLLSRINPYSSSFSIMGS
CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
MSPGRIPQRILMVMELLESPRDVMQKPERLKDLLWPEDMLPPEVDTATLDENLRIMQDPQ
CCCCCHHHHHHHHHHHHHCHHHHHHCHHHHHHHCCCCCCCCCCCCCHHHCCCCEEEECCC
GLAIVLTDGVLFRPGSWELTAPARKLLAPLADVLEYSSADVTISGHTDDSPASGVDNYDL
CEEEEEECCEEECCCCCEECHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCC
SGRRAMAVLDFFLESGLGAERFSVSGYGPDKPLESNATPQGRAQNRRVEILLKTTQWLGR
CCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHC
YS
CC
>Mature Secondary Structure 
AREKKPPEEEGVPMWLVTFSDLVTLLLTFFVLLLSMASMDQVLLSRINPYSSSFSIMGS
CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
MSPGRIPQRILMVMELLESPRDVMQKPERLKDLLWPEDMLPPEVDTATLDENLRIMQDPQ
CCCCCHHHHHHHHHHHHHCHHHHHHCHHHHHHHCCCCCCCCCCCCCHHHCCCCEEEECCC
GLAIVLTDGVLFRPGSWELTAPARKLLAPLADVLEYSSADVTISGHTDDSPASGVDNYDL
CEEEEEECCEEECCCCCEECHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCC
SGRRAMAVLDFFLESGLGAERFSVSGYGPDKPLESNATPQGRAQNRRVEILLKTTQWLGR
CCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHC
YS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934817; 9387221; 9384377 [H]