| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358611
Identifier: 78358611
GI number: 78358611
Start: 3529380
End: 3530900
Strand: Reverse
Name: 78358611
Synonym: Dde_3572
Alternate gene names: NA
Gene position: 3530900-3529380 (Counterclockwise)
Preceding gene: 78358613
Following gene: 78358610
Centisome position: 94.66
GC content: 60.29
Gene sequence:
>1521_bases ATGGCGGCACCTGTCGAGCATACCGTAAAACGAGGCAGGTTTCCACGGCTGTGCCCGGTTCCGCTTCCGGCCCTTCCTTG GTGGTGGCCGATGCTGGCTTGCCGGCGCATGTTCTGGTACACCTTCGCCATGTCGCAGAAAACGCAAACAGACCTGCACA AGGTTTCTCACCGGCGGCGCATGGTTATTCTGGGACTGGACGGACTGTCTTTGTCCATGGCTGTCAAACTGTGCGCCACC GGCCGCTTTCCGCACCTTTCGCGCCTTGCGCTTGCACCGGAGTGCGGCACAGTGCGGGCCGAGCTGCCGGAACTGTCTCC TGTCAACTGGACGTCTTTTTATACCGGCTGCGGGCCGGAAGATCACGGAATTTTCGGATTCACCCGCATCAGTCCAGCCA GCTATCAGATGGCACTTGCGGATTTTTCTCAGGTGGCTGTTCCCACAATTTTTGACCGGTTGGGTGATGCCGGTTATGCA AGCAGACTGGTGAACCTGCCCAACACGTATCCGGTGCGTCCGGTCAAAGGTGCCATGACGGTGGCTGGATTTGTGGCACC GGAACTATCCCGTGCCGTGCATCCGCCTTTTCTTGCGCACCGGCTGCGCGAGGCCGGATACCTGCTGGAGGCGGATACCA CCCGCGGTGCTGCTGACCTGCCGTATCTGCTTGCGCAGCTGCGTGCCACACTGCAGTCGCGCAGATACGCTCTGGAGCTT TTGTGGCCGGACCTCGGCTGGGATGTGTTCACCATAGTGCTCACAGAAACAGACCGCCTTTTTCATTTCTTTTACGATGC GGTGACTGAGCCTGACCACCCGCAGCATGAAGCCTGCATGGTTTTGCTGCAGGAGTGGGACGCACTGATCGGCCGCGTGC TGGAACTGTACGACGCCCTGCCTGTTCCGGGGCGCCTGATGGCGCTGGCAGATCACGGGTTCACACGTCTGATCACAGAG GTGGACATTAACGCATGGCTGCGGCAAAACGGGTACCTGTATACACAGCATCATGACGGTGCGACGGCAGAGCTGGACGC CACGGGTATTCTGCCGGAGACCAGAGCGTTTGCGCTGGACCCGGGCCGTATCTATCTGCATACGGCACAGCGGTTCGGCA GGGGCAGGCTGACCCCCGCGCAGGCCGGACAGACCATGCAGGCCGTCACTGAAGGATTGTTGCGGCTCACATACAACGGT CAGCCGGTCATCAAGGCGGTGCACACGGCCGACAGCCTGTACAACGGTCCCTTGCGTGACAGGGCGCCGGATATTGTCTG CGAACCGCATGACGGCTTTGATCTCAAGGCCAAGTTCGACAGGACGGAAGTTTTCGGCTTTTTCGGCAGAACGGGTACGC ACACTGCGGACGGAGCTTTTTTTTACGATTCGATGCACGCGGCACCGCAGATAATGCGTCATACGGGCAGGCTGGTGCTG GAGCATTTCGGTCTGGCCCCTGTCGCACAATCAGGCCGCCCCGCGGCGACGGGGCTTATCCACCCGCCCGGCAACAAGTA A
Upstream 100 bases:
>100_bases CGAGAAAAAACCGAACATTTCACAGTCATACTTGGCCATGTGTTCCCTCCTGCAACACTGTTGTCAGCATACGGCAGTCT GACAGGTGGTTGTGTGCGCC
Downstream 100 bases:
>100_bases CGATACCATATATATGATTGATTATAAAAAAGAACTGAACGCGGCTCAGTACGAAGCCGCCACCACCCTCGAAGGCCCCA TGCTGGTCATAGCCGGAGCA
Product: type I phosphodiesterase/nucleotide pyrophosphatase family protein
Products: NA
Alternate protein names: Sulfatase Arylsulfatase A-Like Protein; Phosphodiesterase/Nucleotide Pyrophosphatase; Protein Involved In Mitomycin Biosynthesis; Sulfatase Arylsulfatase A-Like
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MAAPVEHTVKRGRFPRLCPVPLPALPWWWPMLACRRMFWYTFAMSQKTQTDLHKVSHRRRMVILGLDGLSLSMAVKLCAT GRFPHLSRLALAPECGTVRAELPELSPVNWTSFYTGCGPEDHGIFGFTRISPASYQMALADFSQVAVPTIFDRLGDAGYA SRLVNLPNTYPVRPVKGAMTVAGFVAPELSRAVHPPFLAHRLREAGYLLEADTTRGAADLPYLLAQLRATLQSRRYALEL LWPDLGWDVFTIVLTETDRLFHFFYDAVTEPDHPQHEACMVLLQEWDALIGRVLELYDALPVPGRLMALADHGFTRLITE VDINAWLRQNGYLYTQHHDGATAELDATGILPETRAFALDPGRIYLHTAQRFGRGRLTPAQAGQTMQAVTEGLLRLTYNG QPVIKAVHTADSLYNGPLRDRAPDIVCEPHDGFDLKAKFDRTEVFGFFGRTGTHTADGAFFYDSMHAAPQIMRHTGRLVL EHFGLAPVAQSGRPAATGLIHPPGNK
Sequences:
>Translated_506_residues MAAPVEHTVKRGRFPRLCPVPLPALPWWWPMLACRRMFWYTFAMSQKTQTDLHKVSHRRRMVILGLDGLSLSMAVKLCAT GRFPHLSRLALAPECGTVRAELPELSPVNWTSFYTGCGPEDHGIFGFTRISPASYQMALADFSQVAVPTIFDRLGDAGYA SRLVNLPNTYPVRPVKGAMTVAGFVAPELSRAVHPPFLAHRLREAGYLLEADTTRGAADLPYLLAQLRATLQSRRYALEL LWPDLGWDVFTIVLTETDRLFHFFYDAVTEPDHPQHEACMVLLQEWDALIGRVLELYDALPVPGRLMALADHGFTRLITE VDINAWLRQNGYLYTQHHDGATAELDATGILPETRAFALDPGRIYLHTAQRFGRGRLTPAQAGQTMQAVTEGLLRLTYNG QPVIKAVHTADSLYNGPLRDRAPDIVCEPHDGFDLKAKFDRTEVFGFFGRTGTHTADGAFFYDSMHAAPQIMRHTGRLVL EHFGLAPVAQSGRPAATGLIHPPGNK >Mature_505_residues AAPVEHTVKRGRFPRLCPVPLPALPWWWPMLACRRMFWYTFAMSQKTQTDLHKVSHRRRMVILGLDGLSLSMAVKLCATG RFPHLSRLALAPECGTVRAELPELSPVNWTSFYTGCGPEDHGIFGFTRISPASYQMALADFSQVAVPTIFDRLGDAGYAS RLVNLPNTYPVRPVKGAMTVAGFVAPELSRAVHPPFLAHRLREAGYLLEADTTRGAADLPYLLAQLRATLQSRRYALELL WPDLGWDVFTIVLTETDRLFHFFYDAVTEPDHPQHEACMVLLQEWDALIGRVLELYDALPVPGRLMALADHGFTRLITEV DINAWLRQNGYLYTQHHDGATAELDATGILPETRAFALDPGRIYLHTAQRFGRGRLTPAQAGQTMQAVTEGLLRLTYNGQ PVIKAVHTADSLYNGPLRDRAPDIVCEPHDGFDLKAKFDRTEVFGFFGRTGTHTADGAFFYDSMHAAPQIMRHTGRLVLE HFGLAPVAQSGRPAATGLIHPPGNK
Specific function: Unknown
COG id: COG3379
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56356; Mature: 56225
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPVEHTVKRGRFPRLCPVPLPALPWWWPMLACRRMFWYTFAMSQKTQTDLHKVSHRRR CCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCE MVILGLDGLSLSMAVKLCATGRFPHLSRLALAPECGTVRAELPELSPVNWTSFYTGCGPE EEEEECCCCHHHHHHHHHHCCCCCCCHHEEECCCCCCHHHCCCCCCCCCCHHEECCCCCC DHGIFGFTRISPASYQMALADFSQVAVPTIFDRLGDAGYASRLVNLPNTYPVRPVKGAMT CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHH VAGFVAPELSRAVHPPFLAHRLREAGYLLEADTTRGAADLPYLLAQLRATLQSRRYALEL HHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEEE LWPDLGWDVFTIVLTETDRLFHFFYDAVTEPDHPQHEACMVLLQEWDALIGRVLELYDAL ECCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC PVPGRLMALADHGFTRLITEVDINAWLRQNGYLYTQHHDGATAELDATGILPETRAFALD CCCCCEEEEHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCCCCEEEEC PGRIYLHTAQRFGRGRLTPAQAGQTMQAVTEGLLRLTYNGQPVIKAVHTADSLYNGPLRD CCEEEEEEHHHHCCCCCCHHHCCHHHHHHHHHHEEEEECCCHHHHHHHHHHHHCCCCCCC RAPDIVCEPHDGFDLKAKFDRTEVFGFFGRTGTHTADGAFFYDSMHAAPQIMRHTGRLVL CCCCCEECCCCCCCEEEECCHHHHHEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH EHFGLAPVAQSGRPAATGLIHPPGNK HHCCCCCCCCCCCCCCCEECCCCCCC >Mature Secondary Structure AAPVEHTVKRGRFPRLCPVPLPALPWWWPMLACRRMFWYTFAMSQKTQTDLHKVSHRRR CCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCE MVILGLDGLSLSMAVKLCATGRFPHLSRLALAPECGTVRAELPELSPVNWTSFYTGCGPE EEEEECCCCHHHHHHHHHHCCCCCCCHHEEECCCCCCHHHCCCCCCCCCCHHEECCCCCC DHGIFGFTRISPASYQMALADFSQVAVPTIFDRLGDAGYASRLVNLPNTYPVRPVKGAMT CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHH VAGFVAPELSRAVHPPFLAHRLREAGYLLEADTTRGAADLPYLLAQLRATLQSRRYALEL HHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEEE LWPDLGWDVFTIVLTETDRLFHFFYDAVTEPDHPQHEACMVLLQEWDALIGRVLELYDAL ECCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC PVPGRLMALADHGFTRLITEVDINAWLRQNGYLYTQHHDGATAELDATGILPETRAFALD CCCCCEEEEHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCCCCEEEEC PGRIYLHTAQRFGRGRLTPAQAGQTMQAVTEGLLRLTYNGQPVIKAVHTADSLYNGPLRD CCEEEEEEHHHHCCCCCCHHHCCHHHHHHHHHHEEEEECCCHHHHHHHHHHHHCCCCCCC RAPDIVCEPHDGFDLKAKFDRTEVFGFFGRTGTHTADGAFFYDSMHAAPQIMRHTGRLVL CCCCCEECCCCCCCEEEECCHHHHHEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH EHFGLAPVAQSGRPAATGLIHPPGNK HHCCCCCCCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA