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The map label for this gene is ygbL [C]

Identifier: 78358608

GI number: 78358608

Start: 3525105

End: 3526103

Strand: Reverse

Name: ygbL [C]

Synonym: Dde_3569

Alternate gene names: 78358608

Gene position: 3526103-3525105 (Counterclockwise)

Preceding gene: 78358609

Following gene: 78358607

Centisome position: 94.53

GC content: 63.46

Gene sequence:

>999_bases
ATGACGGCAGAACTGCGCTTTATAGGTGTTGTCCGTTCTTCTCTTAAAGATATCGGCGATTGCCCCAAACAGGGGGATGA
AGGCGGCGTGGAGGCATGGGTGGACATCCATGAAGAGTACCGCGCCGGACTTGATTCGCTGCGGGCGGGGCAGGGGCTGA
CGCTGCTCACATGGCTGCACGAGGCCGACAGGTCGGTTCTTTCCGTTCATCCGAGAGGCGATACCGGTCGTCCGCGGCGC
GGGGTGTTCAATACCCGTTCGCCTGCACGGCCCAACCCTGTGGGGCTGCACGAGGTACGCCTGACGGCAGTGGAAGACGG
CAGGCTGAAAGTCGCCCCGCTGGAAGCGCTGGACGGTACGCCTGTCATTGATATCAAAACAAGTTTTGACCAGCGCAGCG
GTACTGGCGGCGCAGCGTCGCATGCCGCGCCGCAGGGGGCAGCCGCCGTGCTGCGGCATGCCTGCCGCACCGCGTGGGAG
CGCGGACTGCTTTCCGGTTTTAACGGCAACATCAGTCTGCGCATTGACAGCGACACCTGTCTTGTGACCTGTACCGGCTC
TGTAAAGGGCGATCTGCATGCCGAAGATACGGCGCTGGTACGTATAGATTCCGGCGAACGGCTGGCGGGAGGCGTACCTT
CTTCGGAGACGGCCATGCATCTGGCCATCTACCGCAGCCAGCCGCAGGCGCAGGCGGTGGTGCACACGCATCCGCCCTGC
CTGCTGGCGCTGGGCATCCGCGTGGCAGCGGACGAACTGCTGCGTATTCCGGTGTACGAGTCGGACCTGATACGCAGGCG
CATGACATCCGTTCCCGCGCATGCACCGGGCTCTCAGGAACTGGCACAGGCAGCGGGTGAGGCTGCGCGGACGCACGAAG
CGGTGTACATGGAGCGGCACGGACTGGTGTGCTGGGCCGGTACCGTGCGTCAGGCGCTGGCGCTGAGTGAAGAAATAGAG
CATCTTGCCGGAATGCACCTGCATGCGTCAGGCATATAG

Upstream 100 bases:

>100_bases
TACACGGCGAGCCGGTTGTCATGCTTAACGGCGTACCGGTTACCGGCGGCGGGTTTGATCATTTTTCCGGTTAAGATGCG
TCATACAGGAGGCTTGCCCC

Downstream 100 bases:

>100_bases
TGCGTTGCTGCGGGTTGCACATTGTATACAAAAACGGTATTTCGGGCGATTCAGAGCCAGAGATTCTGAACCTGCTCCGG
CCGCGTGGTGTACGCGGCCG

Product: hypothetical protein

Products: glycerone phosphate; (S)-lactaldehyde

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MTAELRFIGVVRSSLKDIGDCPKQGDEGGVEAWVDIHEEYRAGLDSLRAGQGLTLLTWLHEADRSVLSVHPRGDTGRPRR
GVFNTRSPARPNPVGLHEVRLTAVEDGRLKVAPLEALDGTPVIDIKTSFDQRSGTGGAASHAAPQGAAAVLRHACRTAWE
RGLLSGFNGNISLRIDSDTCLVTCTGSVKGDLHAEDTALVRIDSGERLAGGVPSSETAMHLAIYRSQPQAQAVVHTHPPC
LLALGIRVAADELLRIPVYESDLIRRRMTSVPAHAPGSQELAQAAGEAARTHEAVYMERHGLVCWAGTVRQALALSEEIE
HLAGMHLHASGI

Sequences:

>Translated_332_residues
MTAELRFIGVVRSSLKDIGDCPKQGDEGGVEAWVDIHEEYRAGLDSLRAGQGLTLLTWLHEADRSVLSVHPRGDTGRPRR
GVFNTRSPARPNPVGLHEVRLTAVEDGRLKVAPLEALDGTPVIDIKTSFDQRSGTGGAASHAAPQGAAAVLRHACRTAWE
RGLLSGFNGNISLRIDSDTCLVTCTGSVKGDLHAEDTALVRIDSGERLAGGVPSSETAMHLAIYRSQPQAQAVVHTHPPC
LLALGIRVAADELLRIPVYESDLIRRRMTSVPAHAPGSQELAQAAGEAARTHEAVYMERHGLVCWAGTVRQALALSEEIE
HLAGMHLHASGI
>Mature_331_residues
TAELRFIGVVRSSLKDIGDCPKQGDEGGVEAWVDIHEEYRAGLDSLRAGQGLTLLTWLHEADRSVLSVHPRGDTGRPRRG
VFNTRSPARPNPVGLHEVRLTAVEDGRLKVAPLEALDGTPVIDIKTSFDQRSGTGGAASHAAPQGAAAVLRHACRTAWER
GLLSGFNGNISLRIDSDTCLVTCTGSVKGDLHAEDTALVRIDSGERLAGGVPSSETAMHLAIYRSQPQAQAVVHTHPPCL
LALGIRVAADELLRIPVYESDLIRRRMTSVPAHAPGSQELAQAAGEAARTHEAVYMERHGLVCWAGTVRQALALSEEIEH
LAGMHLHASGI

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=171, Percent_Identity=32.7485380116959, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1789164, Length=178, Percent_Identity=32.5842696629214, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: 4.1.2.17

Molecular weight: Translated: 35505; Mature: 35373

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAELRFIGVVRSSLKDIGDCPKQGDEGGVEAWVDIHEEYRAGLDSLRAGQGLTLLTWLH
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCEEHHHHH
EADRSVLSVHPRGDTGRPRRGVFNTRSPARPNPVGLHEVRLTAVEDGRLKVAPLEALDGT
HHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEHHHCCCC
PVIDIKTSFDQRSGTGGAASHAAPQGAAAVLRHACRTAWERGLLSGFNGNISLRIDSDTC
CEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEE
LVTCTGSVKGDLHAEDTALVRIDSGERLAGGVPSSETAMHLAIYRSQPQAQAVVHTHPPC
EEEEECCCCCCCCCCCEEEEEECCCCEEECCCCCCCCEEEEEEEECCCCCEEEEECCCCC
LLALGIRVAADELLRIPVYESDLIRRRMTSVPAHAPGSQELAQAAGEAARTHEAVYMERH
HHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEECC
GLVCWAGTVRQALALSEEIEHLAGMHLHASGI
CEEEEHHHHHHHHHHHHHHHHHHCCCEEECCC
>Mature Secondary Structure 
TAELRFIGVVRSSLKDIGDCPKQGDEGGVEAWVDIHEEYRAGLDSLRAGQGLTLLTWLH
CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCEEHHHHH
EADRSVLSVHPRGDTGRPRRGVFNTRSPARPNPVGLHEVRLTAVEDGRLKVAPLEALDGT
HHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEHHHCCCC
PVIDIKTSFDQRSGTGGAASHAAPQGAAAVLRHACRTAWERGLLSGFNGNISLRIDSDTC
CEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEE
LVTCTGSVKGDLHAEDTALVRIDSGERLAGGVPSSETAMHLAIYRSQPQAQAVVHTHPPC
EEEEECCCCCCCCCCCEEEEEECCCCEEECCCCCCCCEEEEEEEECCCCCEEEEECCCCC
LLALGIRVAADELLRIPVYESDLIRRRMTSVPAHAPGSQELAQAAGEAARTHEAVYMERH
HHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEECC
GLVCWAGTVRQALALSEEIEHLAGMHLHASGI
CEEEEHHHHHHHHHHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-fuculose 1-phosphate

Specific reaction: L-fuculose 1-phosphate = glycerone phosphate + (S)-lactaldehyde

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]