| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is thiL [H]
Identifier: 78358609
GI number: 78358609
Start: 3526130
End: 3527149
Strand: Reverse
Name: thiL [H]
Synonym: Dde_3570
Alternate gene names: 78358609
Gene position: 3527149-3526130 (Counterclockwise)
Preceding gene: 78358610
Following gene: 78358608
Centisome position: 94.56
GC content: 64.71
Gene sequence:
>1020_bases ATGAGCACCATGACTTCCGAAGATGCGTTTCTTGCCTGTATTGACAGGCACTTCTGTAACGAGCACCCGCATATGCTGCG GGGCAGAGGCGATGATTGCTGCGAACTGGCATGTCCGCCGCGCATGACGCTGAGTACAGACCTGTTCATGCAGGACACCC ATTTCCGGCTGAGCTATTTTTCCGCAGCGGACATAGGGCACAAGGCGCTGGCTGTGAATATCAGCGATATTGCCGCCGCG GGCGCCCGGCCGCTGGGATTCAGCATGGGGCTTATGGTGCCGGAAAAGCAGCCGGGGCCGCACCGGCTTACCGGGGCGTT CTGGGACAGCTTGTTTGACGGCATGGCGCAGCTGGCCCGCAGTCACGGCATGGCACTGACCGGAGGCGACCTGACCCGTG CGGGTACGTTTGGCCTGTGTGTGACGGTGTGGGGCGGCCCCTGCGGCGATGCGCCTTTTTTGCGGCGCACAGGGTGCAGA CCCGGCGATGCCGTTTTTCTGGCGGGCGAAGCCGGACTGGCCCGCACCGGCCTGATGGCGCTGGAAGCCATGGGGGCGGA GGCTGCCGGCGAGTATCCGCATGCTGTGGCGGCTCATCTGAGGCCGGTGCCGCTGGTGCGCAGCGGGCAGCGTCTTGCTG CTTTGCAGGGGGCACGGCCGCAGTCACGCATCACGTTGATGGATCTTTCCGACGGACTGGCCCGTGACCTGCCGCGTCTT TTTGCTGCCGGTGAGGGCACCTGCGGTGCCTCGCTGGTTCTGCCCGATGCTTCACTGCATCCAGATGTGCGCCGCTGGGC CGCAGAGCAGGGTACTGATGCCGCCGTGCATGCGTTCTGCGGCGGAGAAGATTATGCACTGCTGGGCACCTGTGCGCCCG AAGCCGTGGCCGATGTCATTGAGGCCGCGGCATGCGACGGGGTGCCCGTGCGGGTGCTGGGCACGGTACACGGCGAGCCG GTTGTCATGCTTAACGGCGTACCGGTTACCGGCGGCGGGTTTGATCATTTTTCCGGTTAA
Upstream 100 bases:
>100_bases CGGTCTCAAGGTCATTATGGCCCAGTATCTTACTCTGGAATGATAACGGCCCGCTGCCGCGGCCGCCGCAAAATTCACCG GAACCCACACGGATGCGCAT
Downstream 100 bases:
>100_bases GATGCGTCATACAGGAGGCTTGCCCCATGACGGCAGAACTGCGCTTTATAGGTGTTGTCCGTTCTTCTCTTAAAGATATC GGCGATTGCCCCAAACAGGG
Product: thiamine-monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSTMTSEDAFLACIDRHFCNEHPHMLRGRGDDCCELACPPRMTLSTDLFMQDTHFRLSYFSAADIGHKALAVNISDIAAA GARPLGFSMGLMVPEKQPGPHRLTGAFWDSLFDGMAQLARSHGMALTGGDLTRAGTFGLCVTVWGGPCGDAPFLRRTGCR PGDAVFLAGEAGLARTGLMALEAMGAEAAGEYPHAVAAHLRPVPLVRSGQRLAALQGARPQSRITLMDLSDGLARDLPRL FAAGEGTCGASLVLPDASLHPDVRRWAAEQGTDAAVHAFCGGEDYALLGTCAPEAVADVIEAAACDGVPVRVLGTVHGEP VVMLNGVPVTGGGFDHFSG
Sequences:
>Translated_339_residues MSTMTSEDAFLACIDRHFCNEHPHMLRGRGDDCCELACPPRMTLSTDLFMQDTHFRLSYFSAADIGHKALAVNISDIAAA GARPLGFSMGLMVPEKQPGPHRLTGAFWDSLFDGMAQLARSHGMALTGGDLTRAGTFGLCVTVWGGPCGDAPFLRRTGCR PGDAVFLAGEAGLARTGLMALEAMGAEAAGEYPHAVAAHLRPVPLVRSGQRLAALQGARPQSRITLMDLSDGLARDLPRL FAAGEGTCGASLVLPDASLHPDVRRWAAEQGTDAAVHAFCGGEDYALLGTCAPEAVADVIEAAACDGVPVRVLGTVHGEP VVMLNGVPVTGGGFDHFSG >Mature_338_residues STMTSEDAFLACIDRHFCNEHPHMLRGRGDDCCELACPPRMTLSTDLFMQDTHFRLSYFSAADIGHKALAVNISDIAAAG ARPLGFSMGLMVPEKQPGPHRLTGAFWDSLFDGMAQLARSHGMALTGGDLTRAGTFGLCVTVWGGPCGDAPFLRRTGCRP GDAVFLAGEAGLARTGLMALEAMGAEAAGEYPHAVAAHLRPVPLVRSGQRLAALQGARPQSRITLMDLSDGLARDLPRLF AAGEGTCGASLVLPDASLHPDVRRWAAEQGTDAAVHAFCGGEDYALLGTCAPEAVADVIEAAACDGVPVRVLGTVHGEPV VMLNGVPVTGGGFDHFSG
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=322, Percent_Identity=34.472049689441, Blast_Score=118, Evalue=6e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 35422; Mature: 35291
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTMTSEDAFLACIDRHFCNEHPHMLRGRGDDCCELACPPRMTLSTDLFMQDTHFRLSYF CCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCEECCCCCCCEECCEEEEECCCEEEEEE SAADIGHKALAVNISDIAAAGARPLGFSMGLMVPEKQPGPHRLTGAFWDSLFDGMAQLAR EHHCCCCEEEEEEHHHHHHCCCCCCCEEECEECCCCCCCCCHHHHHHHHHHHHHHHHHHH SHGMALTGGDLTRAGTFGLCVTVWGGPCGDAPFLRRTGCRPGDAVFLAGEAGLARTGLMA HCCCEEECCCCCCCCCCEEEEEEECCCCCCCCHHHHCCCCCCCEEEEECCCCCHHHHHHH LEAMGAEAAGEYPHAVAAHLRPVPLVRSGQRLAALQGARPQSRITLMDLSDGLARDLPRL HHHHCCHHCCCCCHHHHHHCCCCCCCCCCCCEEHHCCCCCCCEEEEEECCCHHHHHHHHH FAAGEGTCGASLVLPDASLHPDVRRWAAEQGTDAAVHAFCGGEDYALLGTCAPEAVADVI HHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCHHHHHHHH EAAACDGVPVRVLGTVHGEPVVMLNGVPVTGGGFDHFSG HHHHCCCCCEEEEEECCCCCEEEECCEEECCCCCCCCCC >Mature Secondary Structure STMTSEDAFLACIDRHFCNEHPHMLRGRGDDCCELACPPRMTLSTDLFMQDTHFRLSYF CCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCEECCCCCCCEECCEEEEECCCEEEEEE SAADIGHKALAVNISDIAAAGARPLGFSMGLMVPEKQPGPHRLTGAFWDSLFDGMAQLAR EHHCCCCEEEEEEHHHHHHCCCCCCCEEECEECCCCCCCCCHHHHHHHHHHHHHHHHHHH SHGMALTGGDLTRAGTFGLCVTVWGGPCGDAPFLRRTGCRPGDAVFLAGEAGLARTGLMA HCCCEEECCCCCCCCCCEEEEEEECCCCCCCCHHHHCCCCCCCEEEEECCCCCHHHHHHH LEAMGAEAAGEYPHAVAAHLRPVPLVRSGQRLAALQGARPQSRITLMDLSDGLARDLPRL HHHHCCHHCCCCCHHHHHHCCCCCCCCCCCCEEHHCCCCCCCEEEEEECCCHHHHHHHHH FAAGEGTCGASLVLPDASLHPDVRRWAAEQGTDAAVHAFCGGEDYALLGTCAPEAVADVI HHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCHHHHHHHH EAAACDGVPVRVLGTVHGEPVVMLNGVPVTGGGFDHFSG HHHHCCCCCEEEEEECCCCCEEEECCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9202461; 9384377; 8419296 [H]