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The map label for this gene is 78358527

Identifier: 78358527

GI number: 78358527

Start: 3448863

End: 3449849

Strand: Reverse

Name: 78358527

Synonym: Dde_3488

Alternate gene names: NA

Gene position: 3449849-3448863 (Counterclockwise)

Preceding gene: 78358528

Following gene: 78358526

Centisome position: 92.48

GC content: 60.28

Gene sequence:

>987_bases
ATGAAAAAAGTGCTTTTCCGTTGCGTTCCTTACGATAAAGACGCAGTGACGCTCGCGCTGGAATCGGGGGTGGACGGTCT
GGTGGTTCCTGCCGGTCATGTGCAGGAGGTGGCTTCACTGGCACGCTGCACCGTGGTGGCCGACGAGGATATGCCCTGCA
TACTGCTGCAGGAAAAGGCGGATGAGGAAAACGTGGCCCGCATGCTGCAGCAGGGGCGCAGTGTAATACTGGCCCGCGGC
TGGGAAATCATTCCCGTGGAAAACCTGCTGGCGGTTTCGGATAACGTGGTTGCCGAAGTGGCCTCGCTGGAGGAGGCAAG
ACTTGCGGCGGGCATACTGGAACGCGGTGTCTCCGCCGTGGCCGTGTCTGCCCGTGGTGTGGAGGAACTGAAGGACATCG
TGAAGGAACTCAAGCTTTCTCAGGGGACGCTGGAACTTGTGCCCGCCACGGTCACCGCCGTTTCTGCCGCGGGACTGGGG
CATCGCGTGTGCGTGGACACCATGTCGCTTATGCGCACAGGACAGGGCATGCTGGTGGGTAACTCCAGCGCGTTCACTTT
TCTGGTAAATGCCGAAACCGAGCATAACGAGTATGTGGCGGCGCGCCCTTTCAGGGTTAATGCCGGAGCAGTGCATGCCT
ACGCCGTCATGCCGGGTGACAGGACAACGTATCTTGAGGAACTGTCCGCCGGAACAGAGGTGCTGGTGGTTGACCATACA
GGTGCCACGGGCATTGCCACGGTGGGCAGGGTAAAGGTGGAAGTGCGCCCCATGCTGCTGGTGCGCGCTCGGGTGCAGGG
ACCGGACGGGCAGTGCACCGAAGGCGCTGTTTTTCTGCAGAACGCCGAGACCATACGGCTGGTGCGCACCGACGGTACTC
CCGTAAGCGTTGTGGCACTGAAAGAGGGTGATGAAATTCTGGTGCGTACCGATGCTGCGGGCCGGCATTTCGGCATGCGA
ATTTCCGAAGAGATAAGGGAAGAGTAG

Upstream 100 bases:

>100_bases
AGAGCGCTGGTAAAGGCGCTGCGTGGTCTTGTGCACGAAGACTGGGACGTGGAACAGGCACTTGAAACTGTGGGCGGGTG
CGCCCCCGAGGGTGAATAAC

Downstream 100 bases:

>100_bases
CCATGGCAGACGCAGACCGGATTCAGGAACGGATGGGCAGCGTACGTGAAGATATAGACGCCGTGGACAGAGAGCTGCTG
GCCCTTTTGAACAGGCGGGC

Product: 3-dehydroquinate synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MKKVLFRCVPYDKDAVTLALESGVDGLVVPAGHVQEVASLARCTVVADEDMPCILLQEKADEENVARMLQQGRSVILARG
WEIIPVENLLAVSDNVVAEVASLEEARLAAGILERGVSAVAVSARGVEELKDIVKELKLSQGTLELVPATVTAVSAAGLG
HRVCVDTMSLMRTGQGMLVGNSSAFTFLVNAETEHNEYVAARPFRVNAGAVHAYAVMPGDRTTYLEELSAGTEVLVVDHT
GATGIATVGRVKVEVRPMLLVRARVQGPDGQCTEGAVFLQNAETIRLVRTDGTPVSVVALKEGDEILVRTDAAGRHFGMR
ISEEIREE

Sequences:

>Translated_328_residues
MKKVLFRCVPYDKDAVTLALESGVDGLVVPAGHVQEVASLARCTVVADEDMPCILLQEKADEENVARMLQQGRSVILARG
WEIIPVENLLAVSDNVVAEVASLEEARLAAGILERGVSAVAVSARGVEELKDIVKELKLSQGTLELVPATVTAVSAAGLG
HRVCVDTMSLMRTGQGMLVGNSSAFTFLVNAETEHNEYVAARPFRVNAGAVHAYAVMPGDRTTYLEELSAGTEVLVVDHT
GATGIATVGRVKVEVRPMLLVRARVQGPDGQCTEGAVFLQNAETIRLVRTDGTPVSVVALKEGDEILVRTDAAGRHFGMR
ISEEIREE
>Mature_328_residues
MKKVLFRCVPYDKDAVTLALESGVDGLVVPAGHVQEVASLARCTVVADEDMPCILLQEKADEENVARMLQQGRSVILARG
WEIIPVENLLAVSDNVVAEVASLEEARLAAGILERGVSAVAVSARGVEELKDIVKELKLSQGTLELVPATVTAVSAAGLG
HRVCVDTMSLMRTGQGMLVGNSSAFTFLVNAETEHNEYVAARPFRVNAGAVHAYAVMPGDRTTYLEELSAGTEVLVVDHT
GATGIATVGRVKVEVRPMLLVRARVQGPDGQCTEGAVFLQNAETIRLVRTDGTPVSVVALKEGDEILVRTDAAGRHFGMR
ISEEIREE

Specific function: Unknown

COG id: COG1465

COG function: function code E; Predicted alternative 3-dehydroquinate synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal-type DHQ synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002812
- ProDom:   PD017907 [H]

Pfam domain/function: PF01959 DHQS [H]

EC number: NA

Molecular weight: Translated: 35037; Mature: 35037

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLFRCVPYDKDAVTLALESGVDGLVVPAGHVQEVASLARCTVVADEDMPCILLQEKA
CCCEEEEECCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHHEEEEECCCCCEEEEECCC
DEENVARMLQQGRSVILARGWEIIPVENLLAVSDNVVAEVASLEEARLAAGILERGVSAV
CHHHHHHHHHCCCEEEEECCEEEEEHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEE
AVSARGVEELKDIVKELKLSQGTLELVPATVTAVSAAGLGHRVCVDTMSLMRTGQGMLVG
EEECCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEE
NSSAFTFLVNAETEHNEYVAARPFRVNAGAVHAYAVMPGDRTTYLEELSAGTEVLVVDHT
CCCEEEEEEECCCCCCCEEEECCEEECCCCEEEEEEECCCCHHHHHHHCCCCEEEEEECC
GATGIATVGRVKVEVRPMLLVRARVQGPDGQCTEGAVFLQNAETIRLVRTDGTPVSVVAL
CCCCEEEEEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEECCCEEEEEEECCCCEEEEEE
KEGDEILVRTDAAGRHFGMRISEEIREE
ECCCEEEEEECCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MKKVLFRCVPYDKDAVTLALESGVDGLVVPAGHVQEVASLARCTVVADEDMPCILLQEKA
CCCEEEEECCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHHEEEEECCCCCEEEEECCC
DEENVARMLQQGRSVILARGWEIIPVENLLAVSDNVVAEVASLEEARLAAGILERGVSAV
CHHHHHHHHHCCCEEEEECCEEEEEHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEE
AVSARGVEELKDIVKELKLSQGTLELVPATVTAVSAAGLGHRVCVDTMSLMRTGQGMLVG
EEECCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEE
NSSAFTFLVNAETEHNEYVAARPFRVNAGAVHAYAVMPGDRTTYLEELSAGTEVLVVDHT
CCCEEEEEEECCCCCCCEEEECCEEECCCCEEEEEEECCCCHHHHHHHCCCCEEEEEECC
GATGIATVGRVKVEVRPMLLVRARVQGPDGQCTEGAVFLQNAETIRLVRTDGTPVSVVAL
CCCCEEEEEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEECCCEEEEEEECCCCEEEEEE
KEGDEILVRTDAAGRHFGMRISEEIREE
ECCCEEEEEECCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]