| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358506
Identifier: 78358506
GI number: 78358506
Start: 3428239
End: 3428901
Strand: Reverse
Name: 78358506
Synonym: Dde_3467
Alternate gene names: NA
Gene position: 3428901-3428239 (Counterclockwise)
Preceding gene: 78358507
Following gene: 78358505
Centisome position: 91.92
GC content: 62.29
Gene sequence:
>663_bases GTGACCGAAATTATCTGCGACCGCTGCGGCACCTGCTGCCGCAAGGGCGGACCGGCTCTGCACCGGCAGGACATGGACCT TGTCCGCAGCGGTGTCATACGCCCTGCGCACATGGTCACCCTGCGGCGGGGCGAAATGGCCTATGATGAAGCCCGCGACG AGGTGATTCCCCTGCAGGAAGAGCTGGTCAAGCTGCGCGGGGCGGTGCGCGGCAGCTGGACGTGCCTTTTTTTCATGCCC GCGGAAATAGGCTGCCGCATCTACAACAGCCGCCCTGCGGAGTGCCGCGCTCTGTCCTGCAAGGATACTTCTGCCATTCT GGGAATGTATGACAAAGACAGGCTGACACGGCGCGATATTCTGGCGGACAATGCGGAACTGCTGTCTCTGGTGGAGGCGC ACGAAGCCAGCTGTCCCTATGCGCCGCTTGCCGAGCTGGGGCCCCGGTTGCGCAGTGATGAGGATGCGGCGCGCAGGCTG CTGGAAGCCGTGCGTCTTGATCTTTCCTTCCGCGAGGTTGTGGCGGAACGCACATCCGTTCCCGCAGAGGATATGGATTT TCTTTTCGGCAGGCCCCTTACCGAAACAGTGCACCGCATGTACGGCATCAGAGTGCAGCGGCGGGGTGATGATCTTTTTC TGGCGCCCGCACAGGCTGTCTAG
Upstream 100 bases:
>100_bases GCATGGTTTGTCTCGGCATCCATGGGGTTTGTGGGCTGGCAGGATTTCACCTGCCGGTTTTCCGTCCGTGCGGTGCGGAC GCATTCAGGAGAATAACCCT
Downstream 100 bases:
>100_bases GTTGCGCGGGCACCATGTCCGGTGCAGGGCGGGACAGGCGCCCGCGGCGTAAAACGCCGCACTGCAGGCGGCATGGTGAT GAACAGCGGCGGACAGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTEIICDRCGTCCRKGGPALHRQDMDLVRSGVIRPAHMVTLRRGEMAYDEARDEVIPLQEELVKLRGAVRGSWTCLFFMP AEIGCRIYNSRPAECRALSCKDTSAILGMYDKDRLTRRDILADNAELLSLVEAHEASCPYAPLAELGPRLRSDEDAARRL LEAVRLDLSFREVVAERTSVPAEDMDFLFGRPLTETVHRMYGIRVQRRGDDLFLAPAQAV
Sequences:
>Translated_220_residues MTEIICDRCGTCCRKGGPALHRQDMDLVRSGVIRPAHMVTLRRGEMAYDEARDEVIPLQEELVKLRGAVRGSWTCLFFMP AEIGCRIYNSRPAECRALSCKDTSAILGMYDKDRLTRRDILADNAELLSLVEAHEASCPYAPLAELGPRLRSDEDAARRL LEAVRLDLSFREVVAERTSVPAEDMDFLFGRPLTETVHRMYGIRVQRRGDDLFLAPAQAV >Mature_219_residues TEIICDRCGTCCRKGGPALHRQDMDLVRSGVIRPAHMVTLRRGEMAYDEARDEVIPLQEELVKLRGAVRGSWTCLFFMPA EIGCRIYNSRPAECRALSCKDTSAILGMYDKDRLTRRDILADNAELLSLVEAHEASCPYAPLAELGPRLRSDEDAARRLL EAVRLDLSFREVVAERTSVPAEDMDFLFGRPLTETVHRMYGIRVQRRGDDLFLAPAQAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24798; Mature: 24667
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEIICDRCGTCCRKGGPALHRQDMDLVRSGVIRPAHMVTLRRGEMAYDEARDEVIPLQE CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHEEECCCCHHHHHHHCCCCCHHH ELVKLRGAVRGSWTCLFFMPAEIGCRIYNSRPAECRALSCKDTSAILGMYDKDRLTRRDI HHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCCCEEECCCCCHHHHCCCCHHHHHHHHH LADNAELLSLVEAHEASCPYAPLAELGPRLRSDEDAARRLLEAVRLDLSFREVVAERTSV HHCCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCC PAEDMDFLFGRPLTETVHRMYGIRVQRRGDDLFLAPAQAV CHHHHHHHHCCCHHHHHHHHHCCEEEECCCEEEECCCCCC >Mature Secondary Structure TEIICDRCGTCCRKGGPALHRQDMDLVRSGVIRPAHMVTLRRGEMAYDEARDEVIPLQE CCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHEEECCCCHHHHHHHCCCCCHHH ELVKLRGAVRGSWTCLFFMPAEIGCRIYNSRPAECRALSCKDTSAILGMYDKDRLTRRDI HHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCCCEEECCCCCHHHHCCCCHHHHHHHHH LADNAELLSLVEAHEASCPYAPLAELGPRLRSDEDAARRLLEAVRLDLSFREVVAERTSV HHCCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCC PAEDMDFLFGRPLTETVHRMYGIRVQRRGDDLFLAPAQAV CHHHHHHHHCCCHHHHHHHHHCCEEEECCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA