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The map label for this gene is ybbM [C]

Identifier: 78358500

GI number: 78358500

Start: 3421622

End: 3422410

Strand: Reverse

Name: ybbM [C]

Synonym: Dde_3461

Alternate gene names: 78358500

Gene position: 3422410-3421622 (Counterclockwise)

Preceding gene: 78358505

Following gene: 78358499

Centisome position: 91.75

GC content: 57.16

Gene sequence:

>789_bases
ATGGCGTCCGGATACATTGCCATCGAGTGGTGGCAGCTGTGTTTTGCGCTGGGGTTTGTATTGCTTTCCGGGGCGGTCTC
AGTATGGTACGGCCTGCGTCTTGAGCGCGACCTTGCATGGGGCACTGTGCGCACTTTTGTGCAGCTTATGGCCATGGGAT
ATATACTGCGCCTGCTTTTCGGGTTGCAGAACGCTGTGGCGGTATTATGTATATATGTGGTCATGACATGGTTTGCATCG
CGAATCGTGCGTGACAGAGTGGGGGAGACAGGCGTATCCTATTTCGGGCCGACCTTTCTTTCCGCGTCATTCAGTTTCAT
GCTTGTCACCATGCTTGTGACGGCGGTCATTGTGCAGGCCAGCCCGTGGTGGGACCCCCGCTATTTCATTCCCATAGGGG
GAATGGTGGCAGGCAATTCCATGAACGCGCTTGCCATTTCGCTGGACAGGCTGTTCACGGAACTGCGCCTGCGACGCAGT
GAAGTTGAAATGCGCCTTTGTCTGGGCGCCGATTACGAAGAAGCGAGCCGCGATATTTTCCGGGACGCGCTGAAGTCCGG
CATGGTGCCTTCCATCAATTCCATGATGGGCGTGGGCATAGTTTCGCTGCCGGGCATGATGACCGGTCAGATTCTGGCTG
GTGCCGACCCCGCGGAAGCTGTGCGCTACCAGATTGTGGTCATGCTGATGATAGTGGCGGCAACGGCGCTCAGCAGCTTT
CTGGTGCTGCGGCTGGTGCGCAGGCGCTGCTTCGGTACAGGACACCGTCTGCTGGTTCGTTACAGATGA

Upstream 100 bases:

>100_bases
TGCCGCGATGTACACAGGCGTCCGGTGCCGCGGGGCCGGATGCCGGAAGCCGTGACCGTGTTGCCGGAAAATGCACTGCG
GACAGCGGGGAGGGAGTGGC

Downstream 100 bases:

>100_bases
GCGGCAGTACAACATAAAAGGGGATCAGTTTTGATACACGACATCGAAGCGCTGTTCCGGCGCGGCGTATTGTCGGAACG
GCTGTTTGCCGGGGGCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MASGYIAIEWWQLCFALGFVLLSGAVSVWYGLRLERDLAWGTVRTFVQLMAMGYILRLLFGLQNAVAVLCIYVVMTWFAS
RIVRDRVGETGVSYFGPTFLSASFSFMLVTMLVTAVIVQASPWWDPRYFIPIGGMVAGNSMNALAISLDRLFTELRLRRS
EVEMRLCLGADYEEASRDIFRDALKSGMVPSINSMMGVGIVSLPGMMTGQILAGADPAEAVRYQIVVMLMIVAATALSSF
LVLRLVRRRCFGTGHRLLVRYR

Sequences:

>Translated_262_residues
MASGYIAIEWWQLCFALGFVLLSGAVSVWYGLRLERDLAWGTVRTFVQLMAMGYILRLLFGLQNAVAVLCIYVVMTWFAS
RIVRDRVGETGVSYFGPTFLSASFSFMLVTMLVTAVIVQASPWWDPRYFIPIGGMVAGNSMNALAISLDRLFTELRLRRS
EVEMRLCLGADYEEASRDIFRDALKSGMVPSINSMMGVGIVSLPGMMTGQILAGADPAEAVRYQIVVMLMIVAATALSSF
LVLRLVRRRCFGTGHRLLVRYR
>Mature_261_residues
ASGYIAIEWWQLCFALGFVLLSGAVSVWYGLRLERDLAWGTVRTFVQLMAMGYILRLLFGLQNAVAVLCIYVVMTWFASR
IVRDRVGETGVSYFGPTFLSASFSFMLVTMLVTAVIVQASPWWDPRYFIPIGGMVAGNSMNALAISLDRLFTELRLRRSE
VEMRLCLGADYEEASRDIFRDALKSGMVPSINSMMGVGIVSLPGMMTGQILAGADPAEAVRYQIVVMLMIVAATALSSFL
VLRLVRRRCFGTGHRLLVRYR

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=251, Percent_Identity=31.4741035856574, Blast_Score=142, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 29214; Mature: 29083

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCCCEEEEEEC
>Mature Secondary Structure 
ASGYIAIEWWQLCFALGFVLLSGAVSVWYGLRLERDLAWGTVRTFVQLMAMGYILRLLF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLQNAVAVLCIYVVMTWFASRIVRDRVGETGVSYFGPTFLSASFSFMLVTMLVTAVIVQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHC
SPWWDPRYFIPIGGMVAGNSMNALAISLDRLFTELRLRRSEVEMRLCLGADYEEASRDIF
CCCCCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RDALKSGMVPSINSMMGVGIVSLPGMMTGQILAGADPAEAVRYQIVVMLMIVAATALSSF
HHHHHCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LVLRLVRRRCFGTGHRLLVRYR
HHHHHHHHHHCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]