| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358291
Identifier: 78358291
GI number: 78358291
Start: 3249295
End: 3250449
Strand: Reverse
Name: 78358291
Synonym: Dde_3251
Alternate gene names: NA
Gene position: 3250449-3249295 (Counterclockwise)
Preceding gene: 78358292
Following gene: 78358290
Centisome position: 87.14
GC content: 45.11
Gene sequence:
>1155_bases ATGAGAACCCTTAAGGTCCTGCATCTCGCCAGTTTTGATGGCAATATCGGTGATAATGCAAATCACAATGGCGTCCGGTT TCTATGGAAAAAATATCTTCCGGAATATGATTTTGCCATTACTCCATTAGAGATGCGTGAGTATTTTTGGAAATGGAAGT CTTTTGACGACGGCTTCGCTGACATGGTCAATGAGTACGACCTGTTTGTATGCGGCGGAGGGAACTATTTCGAACTGTGG GTTCAAAGCTCCCCTACCGGAACCAGTGTGGCCATTCCTCTTGAAGTGCTGCGTAAAATAAAGACTCCTTGTCTTTTTTA TGCGCTTGGTCTTGATCCATACATGGGAGCGCCGGATATATGCATTGAACGGTTTAAGCGTTTTCTGGACTATACGCTGG CTTCTCCGCAGTTTCTTGTTTCGGTGCGCAATGACGGCTCGTTAGATTCTGCGCGGCGGGTGCTTGGCGGTGAGTACGCA GACCGGATTCACCTGATGCCCGACGGAGGGCATTTTGTGCAACCGGAAGCCTGCACCCATTATGAGTTGACACCCGGTGC CAGAACGATAGGTGTCAATCTTGCGGGAGATATGCTGGATTTCCGGTTTAAATCATGTAACGGAAAAAATTTAAATGACT TTAAACGGTCTACGGCTGCTGTTCTTTGCGATATTATGCGGCGTATGCCCGATGTGAATTTGATATTTTATCCGCATATC CATAAAGATTATAGTTTTCTGGCTGATTTTATCTGCGGAATTGACGATCATTTGCTCCGCAGGCGGATTACTGTTGCTCC ATATCTGCATGGGCAGGGTGCTGAAAGGAAATTCTTTGACTTGTATAGACAGTGTGCACTCAATATCGGAACAAGACTGC ACGCAAATATCTGTAGCGTGGGACTTAAGACTCCATCCATCGGCATTGTGACGCACGAGCAGATACATGAGCTTTACGGC TATTATGGGATGGCTGAACGCGCTTTACGTTTTTCAGATGACAATTATGCTGCAAAGCTGGATGACCTGATTTCTGATTC ATTAGAAAATACTGAAAGGATATCATGCAGATATTCAGATGTTATGAGTATGGTCACTAAAGATGCAGAGCGGTTTCTTG GGATTATGAATTGCTGGTTGGATAGTGTTGTATGA
Upstream 100 bases:
>100_bases ATGAGGAATGCAAAAGGTGTCCTGTGTGGAAATTGTGTAGCCGGAGGCGGTGTAGAGTACGAGCCCTTGGTGATGGAATT CATGTCGAGGAGTAAGCGCC
Downstream 100 bases:
>100_bases AGATTGTAATGTATCATTACATCAGAAAGCCCGATGCGAACTTTCCGTACTGGCGTTTTTTGCATGTTGACGACTTTCGT CGCCAGCTGGATTTTTTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MRTLKVLHLASFDGNIGDNANHNGVRFLWKKYLPEYDFAITPLEMREYFWKWKSFDDGFADMVNEYDLFVCGGGNYFELW VQSSPTGTSVAIPLEVLRKIKTPCLFYALGLDPYMGAPDICIERFKRFLDYTLASPQFLVSVRNDGSLDSARRVLGGEYA DRIHLMPDGGHFVQPEACTHYELTPGARTIGVNLAGDMLDFRFKSCNGKNLNDFKRSTAAVLCDIMRRMPDVNLIFYPHI HKDYSFLADFICGIDDHLLRRRITVAPYLHGQGAERKFFDLYRQCALNIGTRLHANICSVGLKTPSIGIVTHEQIHELYG YYGMAERALRFSDDNYAAKLDDLISDSLENTERISCRYSDVMSMVTKDAERFLGIMNCWLDSVV
Sequences:
>Translated_384_residues MRTLKVLHLASFDGNIGDNANHNGVRFLWKKYLPEYDFAITPLEMREYFWKWKSFDDGFADMVNEYDLFVCGGGNYFELW VQSSPTGTSVAIPLEVLRKIKTPCLFYALGLDPYMGAPDICIERFKRFLDYTLASPQFLVSVRNDGSLDSARRVLGGEYA DRIHLMPDGGHFVQPEACTHYELTPGARTIGVNLAGDMLDFRFKSCNGKNLNDFKRSTAAVLCDIMRRMPDVNLIFYPHI HKDYSFLADFICGIDDHLLRRRITVAPYLHGQGAERKFFDLYRQCALNIGTRLHANICSVGLKTPSIGIVTHEQIHELYG YYGMAERALRFSDDNYAAKLDDLISDSLENTERISCRYSDVMSMVTKDAERFLGIMNCWLDSVV >Mature_384_residues MRTLKVLHLASFDGNIGDNANHNGVRFLWKKYLPEYDFAITPLEMREYFWKWKSFDDGFADMVNEYDLFVCGGGNYFELW VQSSPTGTSVAIPLEVLRKIKTPCLFYALGLDPYMGAPDICIERFKRFLDYTLASPQFLVSVRNDGSLDSARRVLGGEYA DRIHLMPDGGHFVQPEACTHYELTPGARTIGVNLAGDMLDFRFKSCNGKNLNDFKRSTAAVLCDIMRRMPDVNLIFYPHI HKDYSFLADFICGIDDHLLRRRITVAPYLHGQGAERKFFDLYRQCALNIGTRLHANICSVGLKTPSIGIVTHEQIHELYG YYGMAERALRFSDDNYAAKLDDLISDSLENTERISCRYSDVMSMVTKDAERFLGIMNCWLDSVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43863; Mature: 43863
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLKVLHLASFDGNIGDNANHNGVRFLWKKYLPEYDFAITPLEMREYFWKWKSFDDGFA CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEECHHHHHHHHHHHCCCCCCHH DMVNEYDLFVCGGGNYFELWVQSSPTGTSVAIPLEVLRKIKTPCLFYALGLDPYMGAPDI HHHCCCEEEEECCCCEEEEEEECCCCCCEEEEHHHHHHHHCCCCEEEEECCCCCCCCHHH CIERFKRFLDYTLASPQFLVSVRNDGSLDSARRVLGGEYADRIHLMPDGGHFVQPEACTH HHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEECCCCCEECCCCCCC YELTPGARTIGVNLAGDMLDFRFKSCNGKNLNDFKRSTAAVLCDIMRRMPDVNLIFYPHI EEECCCCEEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC HKDYSFLADFICGIDDHLLRRRITVAPYLHGQGAERKFFDLYRQCALNIGTRLHANICSV CCHHHHHHHHHHCCHHHHHHHHHEECCEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHC GLKTPSIGIVTHEQIHELYGYYGMAERALRFSDDNYAAKLDDLISDSLENTERISCRYSD CCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH VMSMVTKDAERFLGIMNCWLDSVV HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRTLKVLHLASFDGNIGDNANHNGVRFLWKKYLPEYDFAITPLEMREYFWKWKSFDDGFA CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEECHHHHHHHHHHHCCCCCCHH DMVNEYDLFVCGGGNYFELWVQSSPTGTSVAIPLEVLRKIKTPCLFYALGLDPYMGAPDI HHHCCCEEEEECCCCEEEEEEECCCCCCEEEEHHHHHHHHCCCCEEEEECCCCCCCCHHH CIERFKRFLDYTLASPQFLVSVRNDGSLDSARRVLGGEYADRIHLMPDGGHFVQPEACTH HHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEECCCCCEECCCCCCC YELTPGARTIGVNLAGDMLDFRFKSCNGKNLNDFKRSTAAVLCDIMRRMPDVNLIFYPHI EEECCCCEEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC HKDYSFLADFICGIDDHLLRRRITVAPYLHGQGAERKFFDLYRQCALNIGTRLHANICSV CCHHHHHHHHHHCCHHHHHHHHHEECCEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHC GLKTPSIGIVTHEQIHELYGYYGMAERALRFSDDNYAAKLDDLISDSLENTERISCRYSD CCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH VMSMVTKDAERFLGIMNCWLDSVV HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA