Click here to switch to the map view.

The map label for this gene is 78358290

Identifier: 78358290

GI number: 78358290

Start: 3248345

End: 3249298

Strand: Reverse

Name: 78358290

Synonym: Dde_3250

Alternate gene names: NA

Gene position: 3249298-3248345 (Counterclockwise)

Preceding gene: 78358291

Following gene: 78358289

Centisome position: 87.11

GC content: 46.02

Gene sequence:

>954_bases
ATGAAGATTGTAATGTATCATTACATCAGAAAGCCCGATGCGAACTTTCCGTACTGGCGTTTTTTGCATGTTGACGACTT
TCGTCGCCAGCTGGATTTTTTCCAGAAAGATGGAAACATCGTGACCCGCGAACAGCTGGAATATGCCTTGGAGCACGGAG
ATCCGTTGACTGATAAGGACTATCTGCTGACATTTGATGACGGATTGCGGGATCATTATCAATTCGTTCTGCCGGAATTA
CAGCACAGAAATGTTACAGGAATCTTTTCCTGCTGTGCTGGTTCAGCCATGCCTGTGAATGTGCTTGATGTGCACTTAGT
GCATGCCCTGATCGGGGCTTATGGCGGCGAAGCGATGCTGGCTCATCTGAAAAAAACAATCGGGTCTGCTCAGATAGACT
TGAACTCCACACGATTTCGTCATGCAGTGTATAAACTCCAGCCAAGAAATGATGAAACTGAGTTTAAACGCATTGTAAAC
TATTGTCTGGACAGAAAAGCGCGAACTTTTGTTCTGGAGAAGCTTCGTTCCAACCTGTTGCCTGAATTTAACAGCGACAG
GTGTTTTTATCTGCAGCCAGCGGAATTGAAGGAGATGGATGCAGCCGGCATGATTGTTGGCGGGCATACTGTAACGCATA
ATCTTCTTGCTCGTCTTTGCCCTGCTGCCCAACGGGAAGAGATAGGAAGCAATATAGACTGGTTGTCGGCTGTTCTGGGC
CGGCGTATTTTATGGTTTTGTTTCCCGTATGGTGGTGAAATCAGTTATAATGAGTATACACTGCAAATTCTAGAAGAGCA
CGGTATACGATATTGCCTGTCGGTGGATTCAAGGAATGTGGTGGTTGATGATCTTGAAAAACCACTGACTCTGCCAAGAT
ACGATTGTATGGAATTTCCTTTTGGGAAAAGCTACCAATCTCTCCCGCATCCACGGCGGGCATCAGGCCTTTAA

Upstream 100 bases:

>100_bases
CTGAAAGGATATCATGCAGATATTCAGATGTTATGAGTATGGTCACTAAAGATGCAGAGCGGTTTCTTGGGATTATGAAT
TGCTGGTTGGATAGTGTTGT

Downstream 100 bases:

>100_bases
AAACCGGAGGGAATGTTGCGCTCTCAATTTGAAATTCTCTATCCCGGTGTTAGTTTCGGGAATAATGTGCAGATATTGGG
AATGGCTAACGTTGATATCG

Product: polysaccharide deacetylase family protein

Products: NA

Alternate protein names: Polysaccharide Deacetylase Family Protein; Polysaccharide Deacetylase Est4A

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MKIVMYHYIRKPDANFPYWRFLHVDDFRRQLDFFQKDGNIVTREQLEYALEHGDPLTDKDYLLTFDDGLRDHYQFVLPEL
QHRNVTGIFSCCAGSAMPVNVLDVHLVHALIGAYGGEAMLAHLKKTIGSAQIDLNSTRFRHAVYKLQPRNDETEFKRIVN
YCLDRKARTFVLEKLRSNLLPEFNSDRCFYLQPAELKEMDAAGMIVGGHTVTHNLLARLCPAAQREEIGSNIDWLSAVLG
RRILWFCFPYGGEISYNEYTLQILEEHGIRYCLSVDSRNVVVDDLEKPLTLPRYDCMEFPFGKSYQSLPHPRRASGL

Sequences:

>Translated_317_residues
MKIVMYHYIRKPDANFPYWRFLHVDDFRRQLDFFQKDGNIVTREQLEYALEHGDPLTDKDYLLTFDDGLRDHYQFVLPEL
QHRNVTGIFSCCAGSAMPVNVLDVHLVHALIGAYGGEAMLAHLKKTIGSAQIDLNSTRFRHAVYKLQPRNDETEFKRIVN
YCLDRKARTFVLEKLRSNLLPEFNSDRCFYLQPAELKEMDAAGMIVGGHTVTHNLLARLCPAAQREEIGSNIDWLSAVLG
RRILWFCFPYGGEISYNEYTLQILEEHGIRYCLSVDSRNVVVDDLEKPLTLPRYDCMEFPFGKSYQSLPHPRRASGL
>Mature_317_residues
MKIVMYHYIRKPDANFPYWRFLHVDDFRRQLDFFQKDGNIVTREQLEYALEHGDPLTDKDYLLTFDDGLRDHYQFVLPEL
QHRNVTGIFSCCAGSAMPVNVLDVHLVHALIGAYGGEAMLAHLKKTIGSAQIDLNSTRFRHAVYKLQPRNDETEFKRIVN
YCLDRKARTFVLEKLRSNLLPEFNSDRCFYLQPAELKEMDAAGMIVGGHTVTHNLLARLCPAAQREEIGSNIDWLSAVLG
RRILWFCFPYGGEISYNEYTLQILEEHGIRYCLSVDSRNVVVDDLEKPLTLPRYDCMEFPFGKSYQSLPHPRRASGL

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36713; Mature: 36713

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVMYHYIRKPDANFPYWRFLHVDDFRRQLDFFQKDGNIVTREQLEYALEHGDPLTDKD
CEEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCC
YLLTFDDGLRDHYQFVLPELQHRNVTGIFSCCAGSAMPVNVLDVHLVHALIGAYGGEAML
EEEEECCCHHHHHHHHCCHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHH
AHLKKTIGSAQIDLNSTRFRHAVYKLQPRNDETEFKRIVNYCLDRKARTFVLEKLRSNLL
HHHHHHHCCCEEECCHHHHHHHHEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
PEFNSDRCFYLQPAELKEMDAAGMIVGGHTVTHNLLARLCPAAQREEIGSNIDWLSAVLG
CCCCCCCEEEECCHHHHHCCCCCEEECCHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHH
RRILWFCFPYGGEISYNEYTLQILEEHGIRYCLSVDSRNVVVDDLEKPLTLPRYDCMEFP
HHEEEEEECCCCEECCCHHHHHHHHHCCCEEEEEECCCCEEHHHCCCCCCCCCCHHHCCC
FGKSYQSLPHPRRASGL
CCCCHHHCCCCCCCCCC
>Mature Secondary Structure
MKIVMYHYIRKPDANFPYWRFLHVDDFRRQLDFFQKDGNIVTREQLEYALEHGDPLTDKD
CEEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCC
YLLTFDDGLRDHYQFVLPELQHRNVTGIFSCCAGSAMPVNVLDVHLVHALIGAYGGEAML
EEEEECCCHHHHHHHHCCHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHH
AHLKKTIGSAQIDLNSTRFRHAVYKLQPRNDETEFKRIVNYCLDRKARTFVLEKLRSNLL
HHHHHHHCCCEEECCHHHHHHHHEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
PEFNSDRCFYLQPAELKEMDAAGMIVGGHTVTHNLLARLCPAAQREEIGSNIDWLSAVLG
CCCCCCCEEEECCHHHHHCCCCCEEECCHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHH
RRILWFCFPYGGEISYNEYTLQILEEHGIRYCLSVDSRNVVVDDLEKPLTLPRYDCMEFP
HHEEEEEECCCCEECCCHHHHHHHHHCCCEEEEEECCCCEEHHHCCCCCCCCCCHHHCCC
FGKSYQSLPHPRRASGL
CCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA