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The map label for this gene is flgH

Identifier: 78358196

GI number: 78358196

Start: 3142794

End: 3143498

Strand: Reverse

Name: flgH

Synonym: Dde_3156

Alternate gene names: 78358196

Gene position: 3143498-3142794 (Counterclockwise)

Preceding gene: 78358197

Following gene: 78358195

Centisome position: 84.27

GC content: 58.87

Gene sequence:

>705_bases
ATGAGATACGCAGTCATATGCATGCTGCTGCTGGCAGCTTCCGGCTGCACGGCAGCCAGACAGGCGCCGTCGCCCGAACC
CGGGCTTGTGCCGCCGCCTGTGGTCACCACGCCGGAGGAAAAAGCCGAAAATCCCGGTTCGCTGTTCAGCGATGAAAACG
CAGACCTGCTCTATGCCGACTACAGAGCACGCCGCGTGGGGGACATTGTCCTTATAAATATAGTGGAAAATTCCAAGGCC
GAGAACAAGGCATCCACCTCCACCAATAAAGAATCCACCGGCGAGTACGGCGTTTCTTCGTTTTTCGACCGCAGCAAGGT
GGGCATCATTCCCGGGCAGACGCTGCTCAGCGGCCGCACTGGCGATGTGCCGCTGCTCAAGTTCAGCTCTGTAAGCGATT
TTTCCGGCGACGGAGAGACAACCCGCGAAAACACTGTCACCGCCACCATTGCCGCAAGGGTGACACGGGTGCTGCCCGGA
GGTCTGATGCAGGTCGAGGGGTCGCGTGAAACCAGAGTGAACGAAGAAACCCAGATAGTGACGGTGAGCGGGCTGGTGCG
CACTTCGGACGTGGCGGACGACAACTCCGTCATGTCCACCCAGATGGCTGATGCCCGCATTTCCTATTACGGCAAGGGTG
TCATTTCGGACAAACAGCGTGTGGGCTGGTTCACCCGGCTCATGGACAACCTCTGGCCGTTTTAG

Upstream 100 bases:

>100_bases
GAATTTGCAAAGTCGCAGGCAGGTGTATGCCACCGTCAAAGATCCGACCACCGTCATTGTGCAATAGCCGGCCGCACCGG
CGTCCGGAGGAGTGGATATC

Downstream 100 bases:

>100_bases
GAGCGCACACACATGACCTTTTTTACCCGTTGCTTCCGCCGTGGCGCGCTGCTTTTTCTGCTGGCTGTCCTGCTGCTGCC
TTCGCCCGCCCAGGCTGTAC

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MRYAVICMLLLAASGCTAARQAPSPEPGLVPPPVVTTPEEKAENPGSLFSDENADLLYADYRARRVGDIVLINIVENSKA
ENKASTSTNKESTGEYGVSSFFDRSKVGIIPGQTLLSGRTGDVPLLKFSSVSDFSGDGETTRENTVTATIAARVTRVLPG
GLMQVEGSRETRVNEETQIVTVSGLVRTSDVADDNSVMSTQMADARISYYGKGVISDKQRVGWFTRLMDNLWPF

Sequences:

>Translated_234_residues
MRYAVICMLLLAASGCTAARQAPSPEPGLVPPPVVTTPEEKAENPGSLFSDENADLLYADYRARRVGDIVLINIVENSKA
ENKASTSTNKESTGEYGVSSFFDRSKVGIIPGQTLLSGRTGDVPLLKFSSVSDFSGDGETTRENTVTATIAARVTRVLPG
GLMQVEGSRETRVNEETQIVTVSGLVRTSDVADDNSVMSTQMADARISYYGKGVISDKQRVGWFTRLMDNLWPF
>Mature_234_residues
MRYAVICMLLLAASGCTAARQAPSPEPGLVPPPVVTTPEEKAENPGSLFSDENADLLYADYRARRVGDIVLINIVENSKA
ENKASTSTNKESTGEYGVSSFFDRSKVGIIPGQTLLSGRTGDVPLLKFSSVSDFSGDGETTRENTVTATIAARVTRVLPG
GLMQVEGSRETRVNEETQIVTVSGLVRTSDVADDNSVMSTQMADARISYYGKGVISDKQRVGWFTRLMDNLWPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family

Homologues:

Organism=Escherichia coli, GI1787319, Length=244, Percent_Identity=29.9180327868852, Blast_Score=95, Evalue=3e-21,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGH_DESDG (Q30WJ6)

Other databases:

- EMBL:   CP000112
- RefSeq:   YP_389645.1
- STRING:   Q30WJ6
- GeneID:   3758131
- GenomeReviews:   CP000112_GR
- KEGG:   dde:Dde_3156
- NMPDR:   fig|207559.3.peg.3745
- eggNOG:   COG2063
- HOGENOM:   HBG507455
- OMA:   CESQAIL
- ProtClustDB:   PRK12696
- BioCyc:   DDES207559:DDE_3156-MONOMER
- HAMAP:   MF_00415
- InterPro:   IPR000527
- PRINTS:   PR01008

Pfam domain/function: PF02107 FlgH

EC number: NA

Molecular weight: Translated: 25265; Mature: 25265

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYAVICMLLLAASGCTAARQAPSPEPGLVPPPVVTTPEEKAENPGSLFSDENADLLYAD
CHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCEECCHHHCCCCCCCCCCCCCCEEEEC
YRARRVGDIVLINIVENSKAENKASTSTNKESTGEYGVSSFFDRSKVGIIPGQTLLSGRT
CHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHCCCCC
GDVPLLKFSSVSDFSGDGETTRENTVTATIAARVTRVLPGGLMQVEGSRETRVNEETQIV
CCCEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEE
TVSGLVRTSDVADDNSVMSTQMADARISYYGKGVISDKQRVGWFTRLMDNLWPF
EEECEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRYAVICMLLLAASGCTAARQAPSPEPGLVPPPVVTTPEEKAENPGSLFSDENADLLYAD
CHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCEECCHHHCCCCCCCCCCCCCCEEEEC
YRARRVGDIVLINIVENSKAENKASTSTNKESTGEYGVSSFFDRSKVGIIPGQTLLSGRT
CHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHCCCCC
GDVPLLKFSSVSDFSGDGETTRENTVTATIAARVTRVLPGGLMQVEGSRETRVNEETQIV
CCCEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEE
TVSGLVRTSDVADDNSVMSTQMADARISYYGKGVISDKQRVGWFTRLMDNLWPF
EEECEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA