| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is flgI
Identifier: 78358195
GI number: 78358195
Start: 3141669
End: 3142781
Strand: Reverse
Name: flgI
Synonym: Dde_3155
Alternate gene names: 78358195
Gene position: 3142781-3141669 (Counterclockwise)
Preceding gene: 78358196
Following gene: 78358194
Centisome position: 84.25
GC content: 60.83
Gene sequence:
>1113_bases ATGACCTTTTTTACCCGTTGCTTCCGCCGTGGCGCGCTGCTTTTTCTGCTGGCTGTCCTGCTGCTGCCTTCGCCCGCCCA GGCTGTACGCATCAAGGACATAGCCTCGTTCGGCGGTGTGCGCGACAACGACCTCATGGGCTACGGGCTTGTGGTGGGGC TTGGCGGTACGGGTGACAAAAAATCATCCACGTTCACCATAAGCTCCATGGTGAACATGCTCGACAAGATGGGCATAGCC GTGGACCGCACCAAGCTGACACCTAAAAACGTGGCCGCTGTGATGGTGACCACGCGCATGCCCGTGTCGGCCCGTCCGGG TTCGCGTCTGGATATTACGGTATCATCGCTGGGAGACGCCACCAGTCTGCTGGGCGGCGTGTTGCTGATGACACCCATGA AAGGGGTGGACGGCAAGGTGTATGCGCTGGCACAGGGACCGCTTGCCCTGGGCGGTTTTTCGGCGGAAGGCGATGCGGCG CGGGCGCAGAAGAACATCACCACCGTGGGCCGCATTCCCGGCGGTGCCGTGGTGGAGCGTGCCGTGCCGTTTGAATTCAA CACCCAGAACAAGCTGACGCTGCATATGAACGTGCAGGATTTTTCCACAACCATGCAGGTGGTGGACAGGCTTAATGACA ACATGGGCGGCCAGTTTGCCAGTGCGCGCGATATAGCCACCGTGGACATCATGGTGCCGCCCGCCTACAGGGGCAATCTG GTGCCGCTGATGGCTTCGCTGGAAAACCTGCCCGTAACGCCGGACAGCCCCGCCCGTGTGGTGGTGGATGAAAAGACCGG AACCGTTGTGGTGGGTAACAGTGTGCGGATTTCCAAGGTTGCCGTGTCGCATGGCAATCTGCAGATAGTGGTGCAGGAAA ATCCGCAGGTTTCGCAGCCCGGAGCCTTCAGCCCGGGGCAGACCGTGGTCACTCCGCAGACGGATATAGCCGCACAGGAA GAGAACCGGCGGCTGGTGATGATGGAAGGAGCCACGCTGCAGGAACTTGTGGACGGCCTGAATTCCATAGGCGCCACACC GCGCGATCTTATTTCCATACTGCGCACGCTCAAAGCGGCGGGCGCGCTGCACGCGGAGCTGGAGGTCATCTAG
Upstream 100 bases:
>100_bases CATTTCCTATTACGGCAAGGGTGTCATTTCGGACAAACAGCGTGTGGGCTGGTTCACCCGGCTCATGGACAACCTCTGGC CGTTTTAGGAGCGCACACAC
Downstream 100 bases:
>100_bases CATGAGCGGCCCTTTGTACGATTCCGGCATGGCATCTTCCGCCCTTGAAGGGCAGGAGCTTGTGCGGCGCAAGCGCGAGA TGGACGCGCTGCGTCAGCGG
Product: flagellar basal body P-ring protein
Products: NA
Alternate protein names: Basal body P-ring protein
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MTFFTRCFRRGALLFLLAVLLLPSPAQAVRIKDIASFGGVRDNDLMGYGLVVGLGGTGDKKSSTFTISSMVNMLDKMGIA VDRTKLTPKNVAAVMVTTRMPVSARPGSRLDITVSSLGDATSLLGGVLLMTPMKGVDGKVYALAQGPLALGGFSAEGDAA RAQKNITTVGRIPGGAVVERAVPFEFNTQNKLTLHMNVQDFSTTMQVVDRLNDNMGGQFASARDIATVDIMVPPAYRGNL VPLMASLENLPVTPDSPARVVVDEKTGTVVVGNSVRISKVAVSHGNLQIVVQENPQVSQPGAFSPGQTVVTPQTDIAAQE ENRRLVMMEGATLQELVDGLNSIGATPRDLISILRTLKAAGALHAELEVI
Sequences:
>Translated_370_residues MTFFTRCFRRGALLFLLAVLLLPSPAQAVRIKDIASFGGVRDNDLMGYGLVVGLGGTGDKKSSTFTISSMVNMLDKMGIA VDRTKLTPKNVAAVMVTTRMPVSARPGSRLDITVSSLGDATSLLGGVLLMTPMKGVDGKVYALAQGPLALGGFSAEGDAA RAQKNITTVGRIPGGAVVERAVPFEFNTQNKLTLHMNVQDFSTTMQVVDRLNDNMGGQFASARDIATVDIMVPPAYRGNL VPLMASLENLPVTPDSPARVVVDEKTGTVVVGNSVRISKVAVSHGNLQIVVQENPQVSQPGAFSPGQTVVTPQTDIAAQE ENRRLVMMEGATLQELVDGLNSIGATPRDLISILRTLKAAGALHAELEVI >Mature_369_residues TFFTRCFRRGALLFLLAVLLLPSPAQAVRIKDIASFGGVRDNDLMGYGLVVGLGGTGDKKSSTFTISSMVNMLDKMGIAV DRTKLTPKNVAAVMVTTRMPVSARPGSRLDITVSSLGDATSLLGGVLLMTPMKGVDGKVYALAQGPLALGGFSAEGDAAR AQKNITTVGRIPGGAVVERAVPFEFNTQNKLTLHMNVQDFSTTMQVVDRLNDNMGGQFASARDIATVDIMVPPAYRGNLV PLMASLENLPVTPDSPARVVVDEKTGTVVVGNSVRISKVAVSHGNLQIVVQENPQVSQPGAFSPGQTVVTPQTDIAAQEE NRRLVMMEGATLQELVDGLNSIGATPRDLISILRTLKAAGALHAELEVI
Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation
COG id: COG1706
COG function: function code N; Flagellar basal-body P-ring protein
Gene ontology:
Cell location: Periplasm. Bacterial flagellum basal body (By similarity)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgI family
Homologues:
Organism=Escherichia coli, GI1787320, Length=364, Percent_Identity=44.7802197802198, Blast_Score=259, Evalue=2e-70,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): FLGI_DESDG (Q30WJ7)
Other databases:
- EMBL: CP000112 - RefSeq: YP_389644.1 - STRING: Q30WJ7 - GeneID: 3758130 - GenomeReviews: CP000112_GR - KEGG: dde:Dde_3155 - NMPDR: fig|207559.3.peg.3744 - eggNOG: COG1706 - HOGENOM: HBG321070 - OMA: NAVAQMN - ProtClustDB: PRK05303 - BioCyc: DDES207559:DDE_3155-MONOMER - HAMAP: MF_00416 - InterPro: IPR001782 - PRINTS: PR01010
Pfam domain/function: PF02119 FlgI
EC number: NA
Molecular weight: Translated: 39067; Mature: 38936
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFFTRCFRRGALLFLLAVLLLPSPAQAVRIKDIASFGGVRDNDLMGYGLVVGLGGTGDK CCHHHHHHHCCHHHHHHHHHHCCCCHHHEEHHHHHHHCCCCCCCCEEEEEEEEECCCCCC KSSTFTISSMVNMLDKMGIAVDRTKLTPKNVAAVMVTTRMPVSARPGSRLDITVSSLGDA CCCEEEHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCEEEEEHHHCCCH TSLLGGVLLMTPMKGVDGKVYALAQGPLALGGFSAEGDAARAQKNITTVGRIPGGAVVER HHHHHHHHEECCCCCCCCEEEEEECCCEEECCCCCCCCHHHHHCCCEEEECCCCCHHHHC AVPFEFNTQNKLTLHMNVQDFSTTMQVVDRLNDNMGGQFASARDIATVDIMVPPAYRGNL CCCCEECCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCE VPLMASLENLPVTPDSPARVVVDEKTGTVVVGNSVRISKVAVSHGNLQIVVQENPQVSQP EHHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCEEEEEEEEECCCEEEEECCCCCCCCC GAFSPGQTVVTPQTDIAAQEENRRLVMMEGATLQELVDGLNSIGATPRDLISILRTLKAA CCCCCCCEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH GALHAELEVI CCCCEEEEEC >Mature Secondary Structure TFFTRCFRRGALLFLLAVLLLPSPAQAVRIKDIASFGGVRDNDLMGYGLVVGLGGTGDK CHHHHHHHCCHHHHHHHHHHCCCCHHHEEHHHHHHHCCCCCCCCEEEEEEEEECCCCCC KSSTFTISSMVNMLDKMGIAVDRTKLTPKNVAAVMVTTRMPVSARPGSRLDITVSSLGDA CCCEEEHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCEEEEEHHHCCCH TSLLGGVLLMTPMKGVDGKVYALAQGPLALGGFSAEGDAARAQKNITTVGRIPGGAVVER HHHHHHHHEECCCCCCCCEEEEEECCCEEECCCCCCCCHHHHHCCCEEEECCCCCHHHHC AVPFEFNTQNKLTLHMNVQDFSTTMQVVDRLNDNMGGQFASARDIATVDIMVPPAYRGNL CCCCEECCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCE VPLMASLENLPVTPDSPARVVVDEKTGTVVVGNSVRISKVAVSHGNLQIVVQENPQVSQP EHHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCEEEEEEEEECCCEEEEECCCCCCCCC GAFSPGQTVVTPQTDIAAQEENRRLVMMEGATLQELVDGLNSIGATPRDLISILRTLKAA CCCCCCCEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH GALHAELEVI CCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA