Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is cheB1
Identifier: 78356614
GI number: 78356614
Start: 1594903
End: 1596012
Strand: Direct
Name: cheB1
Synonym: Dde_1571
Alternate gene names: 78356614
Gene position: 1594903-1596012 (Clockwise)
Preceding gene: 78356612
Following gene: 78356615
Centisome position: 42.76
GC content: 58.65
Gene sequence:
>1110_bases GTGATAAAAGTCGTCGTTGTTGATGATTCCGCCTTTATGCGCAAGGCTCTCAGCAGCATGCTGGAGAAAGACCCCGGTAT TTCCGTGGTTGCCACGGCACGCAACGGTGAAGAAGGGCTGGAGCAGATACGTAAACATGACCCTGATGTGGTCACGCTTG ATATTGAAATGCCCCGCATGGACGGGTTGACGGCACTGCGCCATATAATGATGGAAATGCCCCGCCCGGTGCTCATGGTC AGCTCGCTGACCGTGGAAGGGGCGGAAGCGACCCTGAAGGCGATGGAGCTGGGCGCTGTTGATTTTATTCCCAAACAGCT TTCCACTGTGTCGCTCGATATCGTTAAAATTGAAAAAGACCTGCAGGAAAAGGTAAAGGCCATTTCCCGTCGCAGGGTTC CGGGCCGGTCTTTCCGTCCTGCCCCCGCGGTCCGTCCTGCTGCCCCTGCCGCTCTGCGTGCCACGCCGCGGCCTTCCGCT GCTCCCTCATCCGCTGCTTCTTCAACGGGAACGCTGCAGGTTGCCGGTGGCAAGCCGGTGCGCGATGTGGTGGCCATCGG GGTGTCCACAGGGGGACCTCCGGCTGTGCAGAAAGTGCTTTCACGTCTGCCGCAGGATTTTCCCGTGGGTATTGTCATTG CTCAGCACATGCCCGCTGCGTTTACCGGGCCGTTTGCCAAAAGGCTTGACGGGGTGTGCGCCATTGCCGTCAAAGAAGCC GAAGACGGCGAGATGCTGATGCCGGGCAAGGCCTACATTGCGCCCGGCGGCAAACATGTGCGGGTCAGAAACACCCGCGG CCGCCTGACTCTGGAAGTGTCTGCCGAACCGGCAGAGGCGCTTTACAAGCCTTCCGCCAATGAGCTTATGGAATCTGCCG GTCTTGCTCTCGGGCGACGTTCGCTCGGTGTCATTCTTACCGGTATGGGCAGTGACGGGCTGGAGGGCATCAAGGTGCTC AAGCAGAAAGGTGGGCATGCTCTGGCGCAGAGTGACTCCACCTGCGTTGTGTACGGTATGCCCAAAGCGATTGTCGACGC CGGTCTGGCTGACAGTGTCGTCGATATTGACGATATGGCGCAGGCCATTATGAATGCTGTTTATAAGTGA
Upstream 100 bases:
>100_bases GCCGGCTGTCATCCGGCACTAAGGCTGTCCGGACATTATGTTATGAATCTGAATCAATTGGTATGCAGGACAGCGTTGTC ATGAATTGCAGGAGTTCCTG
Downstream 100 bases:
>100_bases TATCAGCGTAAGGTCTCTGTTATGCTGGTGACAGTAGATAGTGCCGCTTTGCTGAAATCATAACGAGTAAGGATATAAAC CATGGCTGAGCATCGTCAGA
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MIKVVVVDDSAFMRKALSSMLEKDPGISVVATARNGEEGLEQIRKHDPDVVTLDIEMPRMDGLTALRHIMMEMPRPVLMV SSLTVEGAEATLKAMELGAVDFIPKQLSTVSLDIVKIEKDLQEKVKAISRRRVPGRSFRPAPAVRPAAPAALRATPRPSA APSSAASSTGTLQVAGGKPVRDVVAIGVSTGGPPAVQKVLSRLPQDFPVGIVIAQHMPAAFTGPFAKRLDGVCAIAVKEA EDGEMLMPGKAYIAPGGKHVRVRNTRGRLTLEVSAEPAEALYKPSANELMESAGLALGRRSLGVILTGMGSDGLEGIKVL KQKGGHALAQSDSTCVVYGMPKAIVDAGLADSVVDIDDMAQAIMNAVYK
Sequences:
>Translated_369_residues MIKVVVVDDSAFMRKALSSMLEKDPGISVVATARNGEEGLEQIRKHDPDVVTLDIEMPRMDGLTALRHIMMEMPRPVLMV SSLTVEGAEATLKAMELGAVDFIPKQLSTVSLDIVKIEKDLQEKVKAISRRRVPGRSFRPAPAVRPAAPAALRATPRPSA APSSAASSTGTLQVAGGKPVRDVVAIGVSTGGPPAVQKVLSRLPQDFPVGIVIAQHMPAAFTGPFAKRLDGVCAIAVKEA EDGEMLMPGKAYIAPGGKHVRVRNTRGRLTLEVSAEPAEALYKPSANELMESAGLALGRRSLGVILTGMGSDGLEGIKVL KQKGGHALAQSDSTCVVYGMPKAIVDAGLADSVVDIDDMAQAIMNAVYK >Mature_369_residues MIKVVVVDDSAFMRKALSSMLEKDPGISVVATARNGEEGLEQIRKHDPDVVTLDIEMPRMDGLTALRHIMMEMPRPVLMV SSLTVEGAEATLKAMELGAVDFIPKQLSTVSLDIVKIEKDLQEKVKAISRRRVPGRSFRPAPAVRPAAPAALRATPRPSA APSSAASSTGTLQVAGGKPVRDVVAIGVSTGGPPAVQKVLSRLPQDFPVGIVIAQHMPAAFTGPFAKRLDGVCAIAVKEA EDGEMLMPGKAYIAPGGKHVRVRNTRGRLTLEVSAEPAEALYKPSANELMESAGLALGRRSLGVILTGMGSDGLEGIKVL KQKGGHALAQSDSTCVVYGMPKAIVDAGLADSVVDIDDMAQAIMNAVYK
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain
Homologues:
Organism=Escherichia coli, GI1788192, Length=363, Percent_Identity=39.6694214876033, Blast_Score=252, Evalue=3e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CHEB1_DESDG (Q311M8)
Other databases:
- EMBL: CP000112 - RefSeq: YP_388063.1 - ProteinModelPortal: Q311M8 - STRING: Q311M8 - GeneID: 3755973 - GenomeReviews: CP000112_GR - KEGG: dde:Dde_1571 - NMPDR: fig|207559.3.peg.975 - eggNOG: COG2201 - HOGENOM: HBG705324 - OMA: SALERIM - ProtClustDB: CLSK705569 - BioCyc: DDES207559:DDE_1571-MONOMER - GO: GO:0005737 - GO: GO:0006935 - HAMAP: MF_00099 - InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 - Gene3D: G3DSA:3.40.50.180 - PIRSF: PIRSF000876 - SMART: SM00448
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg; SSF52738 Chemotax_RR_pGlu_Me-esterase; SSF52172 CheY_like
EC number: =3.1.1.61
Molecular weight: Translated: 38866; Mature: 38866
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS50122 CHEB; PS50110 RESPONSE_REGULATORY
Important sites: ACT_SITE 189-189 ACT_SITE 216-216 ACT_SITE 312-312
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKVVVVDDSAFMRKALSSMLEKDPGISVVATARNGEEGLEQIRKHDPDVVTLDIEMPRM CEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCC DGLTALRHIMMEMPRPVLMVSSLTVEGAEATLKAMELGAVDFIPKQLSTVSLDIVKIEKD CHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHEEEEEEHHHHH LQEKVKAISRRRVPGRSFRPAPAVRPAAPAALRATPRPSAAPSSAASSTGTLQVAGGKPV HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEECCCCCC RDVVAIGVSTGGPPAVQKVLSRLPQDFPVGIVIAQHMPAAFTGPFAKRLDGVCAIAVKEA CHHEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHCCHHHHHCCCEEEEEEEEC EDGEMLMPGKAYIAPGGKHVRVRNTRGRLTLEVSAEPAEALYKPSANELMESAGLALGRR CCCCEECCCCEEECCCCCEEEEECCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHCCC SLGVILTGMGSDGLEGIKVLKQKGGHALAQSDSTCVVYGMPKAIVDAGLADSVVDIDDMA CCEEEEEECCCCCHHHHHHHHHCCCCEEECCCCEEEEEECCHHHHHCCCCCCCCCHHHHH QAIMNAVYK HHHHHHHCC >Mature Secondary Structure MIKVVVVDDSAFMRKALSSMLEKDPGISVVATARNGEEGLEQIRKHDPDVVTLDIEMPRM CEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCC DGLTALRHIMMEMPRPVLMVSSLTVEGAEATLKAMELGAVDFIPKQLSTVSLDIVKIEKD CHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHEEEEEEHHHHH LQEKVKAISRRRVPGRSFRPAPAVRPAAPAALRATPRPSAAPSSAASSTGTLQVAGGKPV HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEECCCCCC RDVVAIGVSTGGPPAVQKVLSRLPQDFPVGIVIAQHMPAAFTGPFAKRLDGVCAIAVKEA CHHEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHCCHHHHHCCCEEEEEEEEC EDGEMLMPGKAYIAPGGKHVRVRNTRGRLTLEVSAEPAEALYKPSANELMESAGLALGRR CCCCEECCCCEEECCCCCEEEEECCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHCCC SLGVILTGMGSDGLEGIKVLKQKGGHALAQSDSTCVVYGMPKAIVDAGLADSVVDIDDMA CCEEEEEECCCCCHHHHHHHHHCCCCEEECCCCEEEEEECCHHHHHCCCCCCCCCHHHHH QAIMNAVYK HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA