| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355895
Identifier: 78355895
GI number: 78355895
Start: 879048
End: 879668
Strand: Direct
Name: 78355895
Synonym: Dde_0848
Alternate gene names: NA
Gene position: 879048-879668 (Clockwise)
Preceding gene: 78355894
Following gene: 78355896
Centisome position: 23.57
GC content: 56.36
Gene sequence:
>621_bases ATGCGCGCTAGGTTCTGCGTTGTTTTTGCGCTGCTGGCTCTTGCGGCTGTTTTTGTGCATACACATTCGACAGCGTCTGC TCCGCCCCACCGTCCGCTGCAGGAAATTCCTGTTTCTCTGGGGCCGTGGCGGCTGATGGGCCAGACTGCATTCAGCACCG AAGTGCTGGACCTGCTGCGTCCCACAGACTACCTGATGCGCCGCTATCAGGACCGTTCCGGTGTCGTGGTGGATTTGTAT GTGGGCTATCACGGCGGCGCTAAAGGGGAAGGCGGAATACATTCCCCCCGTAACTGTCTGCCCGGTTCCGGTTGGTATGA GTTGTCTTCAAACCCCATGGTGGTGCGTACTTCTGCCGGCAGCGTGCATCTGGTGCGTGCGGAATACGCCTATGGCGAAA TGAGCACGTCGTTTTATTACTGGTTTGATGTGCGGGGGCGCAGTCTGACGGATGAATATGCATTGAAGTGGGAGCAGCTT GTCAACGGGCTGCTGCACGGGCGCAAGGATGCCTCGTTTATCAGAATATCCGTTCCTCCGCATATTCCGCAGCCTGATGA GGTGGCAACGCGTTTCATCAGTGATTTTTATCCTGTTCTGAACACCTTTCTGCCGCGCTGA
Upstream 100 bases:
>100_bases GCCGAAGGCTTTTTCCATGATTTTGCCGGGCTGGCTGTTTTTGCCACGGCCATGGTGCTCATTGCAGTCATAGGCTGGCT GCTGAGCATGGGAGGACGTA
Downstream 100 bases:
>100_bases CAGGTGCCGCACACCGGGGACGGTATGGTATGACGCTGATATTGTCAGTATTTCTGGGAGCGCTGCTGGCTGCGGCTTTC TGCGTTTACACGGTGCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Exosortase; Eight Transmembrane Protein EpsH
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MRARFCVVFALLALAAVFVHTHSTASAPPHRPLQEIPVSLGPWRLMGQTAFSTEVLDLLRPTDYLMRRYQDRSGVVVDLY VGYHGGAKGEGGIHSPRNCLPGSGWYELSSNPMVVRTSAGSVHLVRAEYAYGEMSTSFYYWFDVRGRSLTDEYALKWEQL VNGLLHGRKDASFIRISVPPHIPQPDEVATRFISDFYPVLNTFLPR
Sequences:
>Translated_206_residues MRARFCVVFALLALAAVFVHTHSTASAPPHRPLQEIPVSLGPWRLMGQTAFSTEVLDLLRPTDYLMRRYQDRSGVVVDLY VGYHGGAKGEGGIHSPRNCLPGSGWYELSSNPMVVRTSAGSVHLVRAEYAYGEMSTSFYYWFDVRGRSLTDEYALKWEQL VNGLLHGRKDASFIRISVPPHIPQPDEVATRFISDFYPVLNTFLPR >Mature_206_residues MRARFCVVFALLALAAVFVHTHSTASAPPHRPLQEIPVSLGPWRLMGQTAFSTEVLDLLRPTDYLMRRYQDRSGVVVDLY VGYHGGAKGEGGIHSPRNCLPGSGWYELSSNPMVVRTSAGSVHLVRAEYAYGEMSTSFYYWFDVRGRSLTDEYALKWEQL VNGLLHGRKDASFIRISVPPHIPQPDEVATRFISDFYPVLNTFLPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23190; Mature: 23190
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRARFCVVFALLALAAVFVHTHSTASAPPHRPLQEIPVSLGPWRLMGQTAFSTEVLDLLR CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHC PTDYLMRRYQDRSGVVVDLYVGYHGGAKGEGGIHSPRNCLPGSGWYELSSNPMVVRTSAG CHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCC SVHLVRAEYAYGEMSTSFYYWFDVRGRSLTDEYALKWEQLVNGLLHGRKDASFIRISVPP CEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCC HIPQPDEVATRFISDFYPVLNTFLPR CCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRARFCVVFALLALAAVFVHTHSTASAPPHRPLQEIPVSLGPWRLMGQTAFSTEVLDLLR CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHC PTDYLMRRYQDRSGVVVDLYVGYHGGAKGEGGIHSPRNCLPGSGWYELSSNPMVVRTSAG CHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCC SVHLVRAEYAYGEMSTSFYYWFDVRGRSLTDEYALKWEQLVNGLLHGRKDASFIRISVPP CEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCC HIPQPDEVATRFISDFYPVLNTFLPR CCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA