| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is exoA [H]
Identifier: 78355886
GI number: 78355886
Start: 866680
End: 869148
Strand: Direct
Name: exoA [H]
Synonym: Dde_0839
Alternate gene names: 78355886
Gene position: 866680-869148 (Clockwise)
Preceding gene: 78355885
Following gene: 78355887
Centisome position: 23.23
GC content: 63.06
Gene sequence:
>2469_bases ATGTCTTTTGCCGCAGTGCGCGGACTGTTGGCGCGGCGCGGAAAGGCTTCTCCGGCCACAGCTGAACAACAGGCCCCGGG TGAACAACAGGCCGCCGGTGAACAACAGGCCGCCGGTCAGGTGCAGGAAGAAGTCGTCGCACAGGCGGTTGCGGAGGCTG AATCTCCGGAAATTCCTCTGTGGCGGCGGGACGAAGGCGTCTGGCCGTTTATCACGGTGGTCATGCCCGTACGCAACGAG GAGCAGTTTATCGCCGCCACGCTTGAGCAGCTTCTGGCGCAGCGGTATCCGCATGACAGGTTCGAGATTATCGTTGCTGA CGGCATGTCCGGCGATGCCACGCCGGATATAGTGAAGGAGATCGCCGGTCGTGCACCGCAGGTGCGGTACGTGCCCAATG CCGGACGGCGCTCATCGGCGGGGCGCAATGCAGGATTCCGCGAAGGCAGGGGAGATATTTTTCTGGTGGTGGACGGGCAT TGTCATATCCCCGATGCCATGCTGCTGCATAATGTTGCCCAGTGCATGCGCAGATTTGATGCCGACTGTCTCGGCCGTCC GCAGCCTCTTGATCCGCCGGGGCTCACCGCGTTTCAGCGGGTGGTGGCGCTGGCCCGGGCATCGCGCATCGGCCACGGTG CCGGTTCGTTGATCTACAGCGGGTATGAAGGCCCAGCCAGCCCCGTAAGCAATGGCGCGGCCTATACCCGTGCCGTGCTG GAAAAAGTGGGCTATGTGGATGAAAGTTTTGATGCCTGCGAAGATGTGGAGTTCAACTACCGTGTGGAGCAGGCCGGTTT TACCGCGGCCACCAGCCCGCTGCTGACTGTCCGCTATTATCCGCGTGAAACCCTGCCTGAACTCTGGCGGCAGATGGTGC GGTACGGCGAGGGGCGTTTCAGACTCTGGCGCCGCCATCCGGCAACGCTGACGCTGCCTGCGGCCCTGCCTGCCGCTCTG GCTGCCGGTGTTTTCTCTCTGCCGCTGTGCCTGCTGGCAGCTCTGGCGGGGTGGCTTCTGCCTTTGGGCATGTGGCTGTT GTGCGTGCTGCTGTATGCGCTGGCAGTGTTTACCGTTTCTGCCGTTGAAGCGCAGAAACGCGAGGAACCGGCCCTGCTGC GGCATATGCCGGTGGTGTTCGGTTCCATACATCTGGGATTGGGGTACGGGTTTCTGCGGGCGGCGGCGCGTTGTCTCAGG CAGGGCTGGAGGCAGTGGAAAAATAGTTTTATCGCTGTGTTACCCCGTCGTGCGCGGCGTGTGCTGGGCATTGCCGAACG CGTGCCGCATTCCGGCGGACCTGTGCGGGTGGGCATGGTCATCGACGGCATCTGGTCGCCCACAGCCGGTACCGAAAAAC AGCTGCTCATGCTGCTGGACAGGCTGGACAGGGAAAAATTCGAGCCGGTGCTTTATGTGCTGCGCGGTTCGCAGTGGATC AGTGAATCTTTTGATTCGTGTCAGGTACGGGTGGCCGGAACAGACAGCTTTAAAACCCGCGAAGGATGGCGCGGAGTCCT GCGGCTTGCGCAGTGGTTTGCGGCAGACGGTGTGGATGTGGTGCAGCTGCACTTCAGGGACGCCACACTGGCAGGCACCG TGGCCGCATGGCTGGCCGGAGTGCCCCGCGTGATCAGCATGCGCAAGAATCAGGGATACTGGCTCACGCGTCCGGACCGC CTGCTGCTGCGGGTACTGAACCGCGGGGCGGATGTTTTTGTGGCCAATTCCGCCGACACAGCCGCCCGGGTGCGGCGTAC GGAACATCTGCCGGCAGAGGCGGTGAGGGTCATTCCCAACGGGTTTGATACCGGCGCACTGCCCGGCGACGGCGGGATGA GGGCAGCCGCCCGGCAAGAAGCCCGCGAAGCGCTGGGGCTTGCACCGGATGTTCCCGTGGCGGGCATTGTGGCCAACCTG CGGCCGGTGAAGCGTCTGGATGTGTTTTTAAAGGCAGCGGCGGCGGTGCGCCGCAAAATGCCTGCGGCACATTTTGTTCT GGTGGGCGAAGGCAGTGCGCGGCCTGCGCTGGAAAAGCAGGCACGCAAGCTGAAGCTGGAAGAATGCACCGTGTTTGCAG GGCGCAGAGAGGACGTGCAGCGGCTGTTGCCGGCCTTTGACGTGGGAGTGCTTTCGTCTGATTCGGAAAGTTTTTCCAAC GCGCTTGTGGAGTATATGGCCGCAGGGCTGCCCGTGGCGGCCACTGACGTGGGCGGTGTGCGTGAAGCGCTGGAAGGTTC GGCCGCAGGCCGTATTGTTCCCGCGGGCAATGCCCGCCGTCTGGGGGCTGCCGTGCTGGAACTGCTGCAGGATGAACAGG CCCGCGGCCTTGCTGCTGAGGAGCATCCCCGTATTGTGCGTGAGCGGTTTTCCGCCCGTGCGTATGTGGCTGCCTATGAG GAACTGTACCGCGAACTGATGTGCGGCGCGGCAGATGTCAATGCCTCCGGCGTACAGAAGGAAGAGTGA
Upstream 100 bases:
>100_bases GTGCCGTTACCCCGCAGCATTGTGCGTGGTCGGACGGCCGCGGCGGTGCCGTGTCCGGCCAGGAACAGCAGCAGCCCGTG CGGCGGCAGGAGGACGCGTA
Downstream 100 bases:
>100_bases CTATGAGCCGTTGTGAAAGCGTTATGGCCTGCGGATGCCGGTTGCTGGTCGGCTTTGTTTTTCTGGCGGCGTTGATGGTG CTGCCGGCTGCTGCGTCTGC
Product: glycosyltransferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 822; Mature: 821
Protein sequence:
>822_residues MSFAAVRGLLARRGKASPATAEQQAPGEQQAAGEQQAAGQVQEEVVAQAVAEAESPEIPLWRRDEGVWPFITVVMPVRNE EQFIAATLEQLLAQRYPHDRFEIIVADGMSGDATPDIVKEIAGRAPQVRYVPNAGRRSSAGRNAGFREGRGDIFLVVDGH CHIPDAMLLHNVAQCMRRFDADCLGRPQPLDPPGLTAFQRVVALARASRIGHGAGSLIYSGYEGPASPVSNGAAYTRAVL EKVGYVDESFDACEDVEFNYRVEQAGFTAATSPLLTVRYYPRETLPELWRQMVRYGEGRFRLWRRHPATLTLPAALPAAL AAGVFSLPLCLLAALAGWLLPLGMWLLCVLLYALAVFTVSAVEAQKREEPALLRHMPVVFGSIHLGLGYGFLRAAARCLR QGWRQWKNSFIAVLPRRARRVLGIAERVPHSGGPVRVGMVIDGIWSPTAGTEKQLLMLLDRLDREKFEPVLYVLRGSQWI SESFDSCQVRVAGTDSFKTREGWRGVLRLAQWFAADGVDVVQLHFRDATLAGTVAAWLAGVPRVISMRKNQGYWLTRPDR LLLRVLNRGADVFVANSADTAARVRRTEHLPAEAVRVIPNGFDTGALPGDGGMRAAARQEAREALGLAPDVPVAGIVANL RPVKRLDVFLKAAAAVRRKMPAAHFVLVGEGSARPALEKQARKLKLEECTVFAGRREDVQRLLPAFDVGVLSSDSESFSN ALVEYMAAGLPVAATDVGGVREALEGSAAGRIVPAGNARRLGAAVLELLQDEQARGLAAEEHPRIVRERFSARAYVAAYE ELYRELMCGAADVNASGVQKEE
Sequences:
>Translated_822_residues MSFAAVRGLLARRGKASPATAEQQAPGEQQAAGEQQAAGQVQEEVVAQAVAEAESPEIPLWRRDEGVWPFITVVMPVRNE EQFIAATLEQLLAQRYPHDRFEIIVADGMSGDATPDIVKEIAGRAPQVRYVPNAGRRSSAGRNAGFREGRGDIFLVVDGH CHIPDAMLLHNVAQCMRRFDADCLGRPQPLDPPGLTAFQRVVALARASRIGHGAGSLIYSGYEGPASPVSNGAAYTRAVL EKVGYVDESFDACEDVEFNYRVEQAGFTAATSPLLTVRYYPRETLPELWRQMVRYGEGRFRLWRRHPATLTLPAALPAAL AAGVFSLPLCLLAALAGWLLPLGMWLLCVLLYALAVFTVSAVEAQKREEPALLRHMPVVFGSIHLGLGYGFLRAAARCLR QGWRQWKNSFIAVLPRRARRVLGIAERVPHSGGPVRVGMVIDGIWSPTAGTEKQLLMLLDRLDREKFEPVLYVLRGSQWI SESFDSCQVRVAGTDSFKTREGWRGVLRLAQWFAADGVDVVQLHFRDATLAGTVAAWLAGVPRVISMRKNQGYWLTRPDR LLLRVLNRGADVFVANSADTAARVRRTEHLPAEAVRVIPNGFDTGALPGDGGMRAAARQEAREALGLAPDVPVAGIVANL RPVKRLDVFLKAAAAVRRKMPAAHFVLVGEGSARPALEKQARKLKLEECTVFAGRREDVQRLLPAFDVGVLSSDSESFSN ALVEYMAAGLPVAATDVGGVREALEGSAAGRIVPAGNARRLGAAVLELLQDEQARGLAAEEHPRIVRERFSARAYVAAYE ELYRELMCGAADVNASGVQKEE >Mature_821_residues SFAAVRGLLARRGKASPATAEQQAPGEQQAAGEQQAAGQVQEEVVAQAVAEAESPEIPLWRRDEGVWPFITVVMPVRNEE QFIAATLEQLLAQRYPHDRFEIIVADGMSGDATPDIVKEIAGRAPQVRYVPNAGRRSSAGRNAGFREGRGDIFLVVDGHC HIPDAMLLHNVAQCMRRFDADCLGRPQPLDPPGLTAFQRVVALARASRIGHGAGSLIYSGYEGPASPVSNGAAYTRAVLE KVGYVDESFDACEDVEFNYRVEQAGFTAATSPLLTVRYYPRETLPELWRQMVRYGEGRFRLWRRHPATLTLPAALPAALA AGVFSLPLCLLAALAGWLLPLGMWLLCVLLYALAVFTVSAVEAQKREEPALLRHMPVVFGSIHLGLGYGFLRAAARCLRQ GWRQWKNSFIAVLPRRARRVLGIAERVPHSGGPVRVGMVIDGIWSPTAGTEKQLLMLLDRLDREKFEPVLYVLRGSQWIS ESFDSCQVRVAGTDSFKTREGWRGVLRLAQWFAADGVDVVQLHFRDATLAGTVAAWLAGVPRVISMRKNQGYWLTRPDRL LLRVLNRGADVFVANSADTAARVRRTEHLPAEAVRVIPNGFDTGALPGDGGMRAAARQEAREALGLAPDVPVAGIVANLR PVKRLDVFLKAAAAVRRKMPAAHFVLVGEGSARPALEKQARKLKLEECTVFAGRREDVQRLLPAFDVGVLSSDSESFSNA LVEYMAAGLPVAATDVGGVREALEGSAAGRIVPAGNARRLGAAVLELLQDEQARGLAAEEHPRIVRERFSARAYVAAYEE LYRELMCGAADVNASGVQKEE
Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the second sugar (glucose). Catalyzes the formation of a beta-1,3 linkage with the galactose lipid carrier [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 89621; Mature: 89490
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFAAVRGLLARRGKASPATAEQQAPGEQQAAGEQQAAGQVQEEVVAQAVAEAESPEIPL CCHHHHHHHHHHCCCCCCCCCHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC WRRDEGVWPFITVVMPVRNEEQFIAATLEQLLAQRYPHDRFEIIVADGMSGDATPDIVKE EECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHH IAGRAPQVRYVPNAGRRSSAGRNAGFREGRGDIFLVVDGHCHIPDAMLLHNVAQCMRRFD HHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC ADCLGRPQPLDPPGLTAFQRVVALARASRIGHGAGSLIYSGYEGPASPVSNGAAYTRAVL HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCHHHHHHHH EKVGYVDESFDACEDVEFNYRVEQAGFTAATSPLLTVRYYPRETLPELWRQMVRYGEGRF HHHCCCCCCCHHHHCCCCCEEECCCCCCHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCE RLWRRHPATLTLPAALPAALAAGVFSLPLCLLAALAGWLLPLGMWLLCVLLYALAVFTVS EEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVEAQKREEPALLRHMPVVFGSIHLGLGYGFLRAAARCLRQGWRQWKNSFIAVLPRRARR HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGIAERVPHSGGPVRVGMVIDGIWSPTAGTEKQLLMLLDRLDREKFEPVLYVLRGSQWI HHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCHHHHCHHHHHHHCCHHH SESFDSCQVRVAGTDSFKTREGWRGVLRLAQWFAADGVDVVQLHFRDATLAGTVAAWLAG HCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCC VPRVISMRKNQGYWLTRPDRLLLRVLNRGADVFVANSADTAARVRRTEHLPAEAVRVIPN CHHHHHHHCCCCEEEECHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCHHHHHHCCC GFDTGALPGDGGMRAAARQEAREALGLAPDVPVAGIVANLRPVKRLDVFLKAAAAVRRKM CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHC PAAHFVLVGEGSARPALEKQARKLKLEECTVFAGRREDVQRLLPAFDVGVLSSDSESFSN CCEEEEEEECCCCCHHHHHHHHHCCHHHHHEECCCHHHHHHHHHHHHCCCCCCCHHHHHH ALVEYMAAGLPVAATDVGGVREALEGSAAGRIVPAGNARRLGAAVLELLQDEQARGLAAE HHHHHHHCCCCEEECCHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCC EHPRIVRERFSARAYVAAYEELYRELMCGAADVNASGVQKEE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SFAAVRGLLARRGKASPATAEQQAPGEQQAAGEQQAAGQVQEEVVAQAVAEAESPEIPL CHHHHHHHHHHCCCCCCCCCHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC WRRDEGVWPFITVVMPVRNEEQFIAATLEQLLAQRYPHDRFEIIVADGMSGDATPDIVKE EECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHH IAGRAPQVRYVPNAGRRSSAGRNAGFREGRGDIFLVVDGHCHIPDAMLLHNVAQCMRRFD HHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC ADCLGRPQPLDPPGLTAFQRVVALARASRIGHGAGSLIYSGYEGPASPVSNGAAYTRAVL HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCHHHHHHHH EKVGYVDESFDACEDVEFNYRVEQAGFTAATSPLLTVRYYPRETLPELWRQMVRYGEGRF HHHCCCCCCCHHHHCCCCCEEECCCCCCHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCE RLWRRHPATLTLPAALPAALAAGVFSLPLCLLAALAGWLLPLGMWLLCVLLYALAVFTVS EEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVEAQKREEPALLRHMPVVFGSIHLGLGYGFLRAAARCLRQGWRQWKNSFIAVLPRRARR HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGIAERVPHSGGPVRVGMVIDGIWSPTAGTEKQLLMLLDRLDREKFEPVLYVLRGSQWI HHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCHHHHCHHHHHHHCCHHH SESFDSCQVRVAGTDSFKTREGWRGVLRLAQWFAADGVDVVQLHFRDATLAGTVAAWLAG HCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCC VPRVISMRKNQGYWLTRPDRLLLRVLNRGADVFVANSADTAARVRRTEHLPAEAVRVIPN CHHHHHHHCCCCEEEECHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCHHHHHHCCC GFDTGALPGDGGMRAAARQEAREALGLAPDVPVAGIVANLRPVKRLDVFLKAAAAVRRKM CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHC PAAHFVLVGEGSARPALEKQARKLKLEECTVFAGRREDVQRLLPAFDVGVLSSDSESFSN CCEEEEEEECCCCCHHHHHHHHHCCHHHHHEECCCHHHHHHHHHHHHCCCCCCCHHHHHH ALVEYMAAGLPVAATDVGGVREALEGSAAGRIVPAGNARRLGAAVLELLQDEQARGLAAE HHHHHHHCCCCEEECCHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCC EHPRIVRERFSARAYVAAYEELYRELMCGAADVNASGVQKEE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8226645; 8246891; 11481431 [H]