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The map label for this gene is intD [C]

Identifier: 78355667

GI number: 78355667

Start: 639695

End: 640540

Strand: Direct

Name: intD [C]

Synonym: Dde_0620

Alternate gene names: 78355667

Gene position: 639695-640540 (Clockwise)

Preceding gene: 78355666

Following gene: 78355669

Centisome position: 17.15

GC content: 50.24

Gene sequence:

>846_bases
ATGACTGTCGGTAAGTGGGCAGAATACTATGTTGATCACGCCGAACAGACTTGGCCTCACAAGACGTTTGACGAGAAGCG
TAGAGCGTTCAGACGTTTTTTTGATACCAAAATATGCAAGCCTGGGGACCCTATCACCACAGTCTCGGTGGAAAAGGCTT
CCAAGGTGCTGGCGGTATTAAAGGAACACCACTCGGGCAACAACCTGAATAGGATGCGGAAAAATCTGATTGCAGCGTGG
AACTGGGGAATAAAAAATCACAAGATTCCTGCCCAAAACCCCTTCGCTTTGACAGACAGATCTAGCGAGATCATCAAGTT
GCGATATGTCCCTCCGATGGAGGACTTGAAGGCGGTTGTTGATGTGGCTGCAGGAGAACAGAGGCTGATGCTTTTGACTG
CGTTTTATACTGCAGCCCGGAAGTGTGAACTCTTTCGGCTGAGGTGGACGGATGTAGACTTCGCATCGAACAAGATCGGT
CTCTGGACGAAAAAACGTAAGGGGGGAAACTTGGAGTTGGATCTTATGCCAATGGCAAAACCCTTACGTTCACTGCTCGA
AGAGCACCACCGTGGGGCAGAGTCTGAACATGTCTTTGATCAGTCTCCACATTCGCAGAACTCGAACAACCGCTGGTTGA
AAGAGTTATGCAAGGAGGCTGGGGTCAAGGCTTTTGGATTTCACGGCATCAGGCATTTGGCGGCAAGCTATGGCATTGAG
TCCGGCGCTTCCATTGTGGATGTGCAGGAGTTGCTGCGGCATAAGTCTGCAAATGTGACTGCCCGGTATATCAGACGATT
GAAGAAGGGCAACCGTGCGGTGGAAGCTTTGGAAATGGCCCTGTAG

Upstream 100 bases:

>100_bases
TGACAAGAAAAAAGATGCAATAGGATGGGAGCGTGATACGCGCATCGCGCTCGAACATGCTGAAGCACAGAAGCGTTCGT
TGCGGGGCATCGGGGAAGTC

Downstream 100 bases:

>100_bases
GTAACGCGAAAGTGTTTTGGGAAAAATTGACACATCGGTCTGACACATGGCGACAGAGCAAAAGAAAAAAGCACTTATGC
TATCGCATAAGTGCTTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Site-Specific Recombinase; Phage Integrase Family Protein; Integrase; Site Specific Recombinase

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTVGKWAEYYVDHAEQTWPHKTFDEKRRAFRRFFDTKICKPGDPITTVSVEKASKVLAVLKEHHSGNNLNRMRKNLIAAW
NWGIKNHKIPAQNPFALTDRSSEIIKLRYVPPMEDLKAVVDVAAGEQRLMLLTAFYTAARKCELFRLRWTDVDFASNKIG
LWTKKRKGGNLELDLMPMAKPLRSLLEEHHRGAESEHVFDQSPHSQNSNNRWLKELCKEAGVKAFGFHGIRHLAASYGIE
SGASIVDVQELLRHKSANVTARYIRRLKKGNRAVEALEMAL

Sequences:

>Translated_281_residues
MTVGKWAEYYVDHAEQTWPHKTFDEKRRAFRRFFDTKICKPGDPITTVSVEKASKVLAVLKEHHSGNNLNRMRKNLIAAW
NWGIKNHKIPAQNPFALTDRSSEIIKLRYVPPMEDLKAVVDVAAGEQRLMLLTAFYTAARKCELFRLRWTDVDFASNKIG
LWTKKRKGGNLELDLMPMAKPLRSLLEEHHRGAESEHVFDQSPHSQNSNNRWLKELCKEAGVKAFGFHGIRHLAASYGIE
SGASIVDVQELLRHKSANVTARYIRRLKKGNRAVEALEMAL
>Mature_280_residues
TVGKWAEYYVDHAEQTWPHKTFDEKRRAFRRFFDTKICKPGDPITTVSVEKASKVLAVLKEHHSGNNLNRMRKNLIAAWN
WGIKNHKIPAQNPFALTDRSSEIIKLRYVPPMEDLKAVVDVAAGEQRLMLLTAFYTAARKCELFRLRWTDVDFASNKIGL
WTKKRKGGNLELDLMPMAKPLRSLLEEHHRGAESEHVFDQSPHSQNSNNRWLKELCKEAGVKAFGFHGIRHLAASYGIES
GASIVDVQELLRHKSANVTARYIRRLKKGNRAVEALEMAL

Specific function: Integrase From The Cryptic Lambdoic Prophage Dlp12. Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From Th

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32198; Mature: 32067

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVGKWAEYYVDHAEQTWPHKTFDEKRRAFRRFFDTKICKPGDPITTVSVEKASKVLAVL
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHH
KEHHSGNNLNRMRKNLIAAWNWGIKNHKIPAQNPFALTDRSSEIIKLRYVPPMEDLKAVV
HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCHHHHHHHH
DVAAGEQRLMLLTAFYTAARKCELFRLRWTDVDFASNKIGLWTKKRKGGNLELDLMPMAK
HHHCCCHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCEEECCCCCCEEEEEHHHHH
PLRSLLEEHHRGAESEHVFDQSPHSQNSNNRWLKELCKEAGVKAFGFHGIRHLAASYGIE
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
SGASIVDVQELLRHKSANVTARYIRRLKKGNRAVEALEMAL
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure 
TVGKWAEYYVDHAEQTWPHKTFDEKRRAFRRFFDTKICKPGDPITTVSVEKASKVLAVL
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHH
KEHHSGNNLNRMRKNLIAAWNWGIKNHKIPAQNPFALTDRSSEIIKLRYVPPMEDLKAVV
HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCHHHHHHHH
DVAAGEQRLMLLTAFYTAARKCELFRLRWTDVDFASNKIGLWTKKRKGGNLELDLMPMAK
HHHCCCHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCEEECCCCCCEEEEEHHHHH
PLRSLLEEHHRGAESEHVFDQSPHSQNSNNRWLKELCKEAGVKAFGFHGIRHLAASYGIE
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
SGASIVDVQELLRHKSANVTARYIRRLKKGNRAVEALEMAL
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA