Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is 78355669
Identifier: 78355669
GI number: 78355669
Start: 642569
End: 643180
Strand: Direct
Name: 78355669
Synonym: Dde_0622
Alternate gene names: NA
Gene position: 642569-643180 (Clockwise)
Preceding gene: 78355667
Following gene: 78355670
Centisome position: 17.23
GC content: 60.29
Gene sequence:
>612_bases ATGCAGAACACCATGTCTTTTTCGTTGCGCAGCCCCCTGAACGGACTGCGGTTTTCCGGCGCTTCGGCCGGGTATCTTTC GGCTCTTGTGGCCGCTGTGGTCATGTCGTTGACCGGCATCATCATTAAACACATAAGCGATGAATACGCTCTGCCGCCGG CGCAGCTTGCCTTCTGGCGCAATGCGCTGGTTTTTCTGACGCTGCTGCCCGTACTGACGCTGCTGCGCGTGCCCGTGCGG GTGCACGGCAAGGCCGACAACAGGCTTCTGGTTGCCTACGGTTTCATGCTGGCTTCCATGAACCTTGACTGGACCATCGC CGTCATTGAAACGGGTGCTTCCGTGGCCACGGTGCTTTCTTACTGCTCCGCGGCATATTCCGGCATACTCGGCTGGCTGC TGCTGGGCGAAAGAATGAGCCGCTCGCTGGCGCTGGCGGTTGTCATCTGCCTTTCGGGCTGCGCACTGGTGTGCGGCGTG CTCACACCGGAAGTCTGGAGCGGTATGAGCACTCTGGGGCTTGTCACGGGATTCGCCTCGGGGCTTCTGTATGCCGGTTA CGGAATGATGGGGCGTCTTGCAGCCTGCCGGGGTGAAGTGCCCTATAGATGA
Upstream 100 bases:
>100_bases TAAAGTGACCCTGTAAATATTCATAAAAAGTGTCCCTTATCAAGGGGTCAATGCAGGCGTAGAGGCATGCTTCATTTTTT GTTGATCGAGGATGCATGCC
Downstream 100 bases:
>100_bases CGGACACGAAGCGAGAGGTTATCGTCCGCCCATGAGGAGAAGCCCATGGGAAGACTGATCAAGTATTCGAAAGAGTTCAA ACTGTCCGCCGTCAAGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MQNTMSFSLRSPLNGLRFSGASAGYLSALVAAVVMSLTGIIIKHISDEYALPPAQLAFWRNALVFLTLLPVLTLLRVPVR VHGKADNRLLVAYGFMLASMNLDWTIAVIETGASVATVLSYCSAAYSGILGWLLLGERMSRSLALAVVICLSGCALVCGV LTPEVWSGMSTLGLVTGFASGLLYAGYGMMGRLAACRGEVPYR
Sequences:
>Translated_203_residues MQNTMSFSLRSPLNGLRFSGASAGYLSALVAAVVMSLTGIIIKHISDEYALPPAQLAFWRNALVFLTLLPVLTLLRVPVR VHGKADNRLLVAYGFMLASMNLDWTIAVIETGASVATVLSYCSAAYSGILGWLLLGERMSRSLALAVVICLSGCALVCGV LTPEVWSGMSTLGLVTGFASGLLYAGYGMMGRLAACRGEVPYR >Mature_203_residues MQNTMSFSLRSPLNGLRFSGASAGYLSALVAAVVMSLTGIIIKHISDEYALPPAQLAFWRNALVFLTLLPVLTLLRVPVR VHGKADNRLLVAYGFMLASMNLDWTIAVIETGASVATVLSYCSAAYSGILGWLLLGERMSRSLALAVVICLSGCALVCGV LTPEVWSGMSTLGLVTGFASGLLYAGYGMMGRLAACRGEVPYR
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21543; Mature: 21543
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNTMSFSLRSPLNGLRFSGASAGYLSALVAAVVMSLTGIIIKHISDEYALPPAQLAFWR CCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH NALVFLTLLPVLTLLRVPVRVHGKADNRLLVAYGFMLASMNLDWTIAVIETGASVATVLS HHHHHHHHHHHHHHHHCCHHEECCCCCEEHHHHHHHHHHCCCCEEEEEEECCCHHHHHHH YCSAAYSGILGWLLLGERMSRSLALAVVICLSGCALVCGVLTPEVWSGMSTLGLVTGFAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHH GLLYAGYGMMGRLAACRGEVPYR HHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQNTMSFSLRSPLNGLRFSGASAGYLSALVAAVVMSLTGIIIKHISDEYALPPAQLAFWR CCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH NALVFLTLLPVLTLLRVPVRVHGKADNRLLVAYGFMLASMNLDWTIAVIETGASVATVLS HHHHHHHHHHHHHHHHCCHHEECCCCCEEHHHHHHHHHHCCCCEEEEEEECCCHHHHHHH YCSAAYSGILGWLLLGERMSRSLALAVVICLSGCALVCGVLTPEVWSGMSTLGLVTGFAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHH GLLYAGYGMMGRLAACRGEVPYR HHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA